mRNA_M-pyrifera_M_contig128541.5730.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A7X9KGK6_9ACTN (Nitroreductase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KGK6_9ACTN) HSP 1 Score: 174 bits (441), Expect = 8.690e-53 Identity = 84/111 (75.68%), Postives = 96/111 (86.49%), Query Frame = 1
Query: 13 KHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
+HPAI++ A+L +THPTDTDLGRLSIVGGASVY + QN CLALR++GVATTLTTLLC+FEPQVKEL IPE +TAA IVAGYP K FPTKL RRPVEE+AF+DSFD PL
Sbjct: 114 EHPAIVIVLADLEDTHPTDTDLGRLSIVGGASVYTVAQNFCLALRDQGVATTLTTLLCMFEPQVKELFNIPENLSTAAFIVAGYPEKSFPTKLFRRPVEEMAFLDSFDRPL 224
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: UPI000E312A01 (nitroreductase family protein n=1 Tax=Euzebya tangerina TaxID=591198 RepID=UPI000E312A01) HSP 1 Score: 171 bits (432), Expect = 1.840e-51 Identity = 84/115 (73.04%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
+N+ HPAII+ACA+LSETHPTDTDLGRLS+VGGAS+YP VQNL LALR EGVATT TTLL +FE QVKELL IP+ ATA H+ AGYP FP+ LTR PVEEIAFM++FD PL
Sbjct: 108 ENIPNHPAIIIACADLSETHPTDTDLGRLSVVGGASIYPTVQNLALALRAEGVATTWTTLLVMFEEQVKELLDIPDHLATACHLFAGYPRDGFPSTLTRLPVEEIAFMENFDTPL 222
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A7K0JPF6_9ACTN (Oxidoreductase n=1 Tax=Acidiferrimicrobium australe TaxID=2664430 RepID=A0A7K0JPF6_9ACTN) HSP 1 Score: 167 bits (422), Expect = 8.080e-50 Identity = 80/115 (69.57%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
++ +HP IIV CA+++ THPTDT+LGRLSIVGG SVYP QNLCLALR GVATT TTLLC FEPQVKELLGIP E+ATAAHIVAGYP+ FPT+L R PVEE+ +D++ PL
Sbjct: 112 EHFGEHPVIIVVCADIANTHPTDTELGRLSIVGGGSVYPQAQNLCLALRARGVATTFTTLLCAFEPQVKELLGIPAEWATAAHIVAGYPANGFPTRLNRLPVEELVSVDTWGQPL 226
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A5M3W964_9ACTN (Nitroreductase n=2 Tax=Acrocarpospora corrugata TaxID=35763 RepID=A0A5M3W964_9ACTN) HSP 1 Score: 162 bits (409), Expect = 1.800e-48 Identity = 75/115 (65.22%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
++L++ PAI+V CA+L HPTDT+LGRLS+VGGAS+YP QN CLALR+ GVA+ +TTLLC +EPQVKELLGIP+ TAAHI GYP++PFPT+L+R PVEEIAF +++ NPL
Sbjct: 72 EHLDEAPAIVVCCAQLDGLHPTDTELGRLSVVGGASIYPTAQNFCLALRSHGVASAITTLLCHYEPQVKELLGIPDGVITAAHIAVGYPAEPFPTRLSRIPVEEIAFSNAYGNPL 186
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A6M6JH30_9PSEU (Nitroreductase family protein n=2 Tax=Pseudonocardia TaxID=1847 RepID=A0A6M6JH30_9PSEU) HSP 1 Score: 162 bits (411), Expect = 1.960e-48 Identity = 77/115 (66.96%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
++L + PAI+VACAEL HPTDT+LGRLS+VGG S+YP VQNLCLALR++GV T TTLLC+ EP+V+ELL IPE + TAAHI GYP KPFPTKLTR PV+EI + +SF PL
Sbjct: 96 EHLAEVPAIVVACAELDGLHPTDTELGRLSVVGGGSIYPTVQNLCLALRDQGVGTAFTTLLCIEEPKVRELLAIPEGFITAAHIAVGYPEKPFPTKLTRTPVDEIVYAESFAKPL 210
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A7G7MAY7_9PSEU (Nitroreductase family protein n=2 Tax=Pseudonocardia TaxID=1847 RepID=A0A7G7MAY7_9PSEU) HSP 1 Score: 160 bits (406), Expect = 1.160e-47 Identity = 78/115 (67.83%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
+NL PAI+VACAEL HPTDT L RLS+VGG S+YP VQNLCLALRNEGV T TTLLC+ EP V+ELL IPE + TA HI GYP +PFPTKLTR PVEEI + +SF PL
Sbjct: 96 ENLATVPAIVVACAELDGLHPTDTGLDRLSVVGGGSIYPTVQNLCLALRNEGVGTAFTTLLCITEPAVRELLSIPEGFITAGHIAIGYPERPFPTKLTRMPVEEIVYAESFARPL 210
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A1Q4DWE9_9PSEU (Oxidoreductase n=1 Tax=Pseudonocardia sp. 73-21 TaxID=1895809 RepID=A0A1Q4DWE9_9PSEU) HSP 1 Score: 160 bits (404), Expect = 2.260e-47 Identity = 75/114 (65.79%), Postives = 92/114 (80.70%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNP 342
+NL PAI+VACAEL+ HPTD +LGRLS+VGG S+YP VQNLCLALR++GVAT TTLLC+ EP V+ELL IP+++ TA HI GYP++ FPTKLTR PVEEI F ++FD P
Sbjct: 96 ENLATVPAIVVACAELAGLHPTDNELGRLSVVGGGSIYPTVQNLCLALRDQGVATAFTTLLCITEPAVRELLHIPDDFITAGHIAVGYPARGFPTKLTRSPVEEIVFSETFDRP 209
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: UPI000B4BD122 (nitroreductase family protein n=2 Tax=unclassified Kineosporia TaxID=2626061 RepID=UPI000B4BD122) HSP 1 Score: 159 bits (403), Expect = 3.600e-47 Identity = 76/115 (66.09%), Postives = 94/115 (81.74%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
+NL K PAIIV CAE++ HPTDT+LGRLS+VGG S+YP +QNLCLALR++GVAT +TTLLCL EP V ELL IPE + TAAHI GYP+K FPTKLTR PVE+I +++F +P+
Sbjct: 96 ENLHKVPAIIVVCAEMAGLHPTDTELGRLSVVGGCSIYPTMQNLCLALRDQGVATAVTTLLCLSEPAVTELLEIPEGFITAAHIAVGYPAKGFPTKLTRSPVEDIVHLETFGSPM 210
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A0A7J9XTJ2_9PSEU (Oxidoreductase n=1 Tax=Pseudonocardiaceae bacterium TaxID=1873463 RepID=A0A7J9XTJ2_9PSEU) HSP 1 Score: 159 bits (401), Expect = 7.440e-47 Identity = 73/115 (63.48%), Postives = 95/115 (82.61%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
+NL PAI+V CAEL+ HPTDT+LGRLS+VGGAS+YP +QN+CLALR +GVA+ +TTLLC EPQV+ELLG+P+ + TAAH+V GYP + FPT+LTRRPVE+I ++ FD P+
Sbjct: 96 ENLATVPAILVLCAELAGLHPTDTELGRLSVVGGASIYPTMQNVCLALREQGVASAITTLLCHQEPQVRELLGLPDGFITAAHVVVGYPERGFPTRLTRRPVEDIVSLEHFDTPM 210
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Match: A1SET7_NOCSJ (Nitroreductase n=1 Tax=Nocardioides sp. (strain ATCC BAA-499 / JS614) TaxID=196162 RepID=A1SET7_NOCSJ) HSP 1 Score: 159 bits (402), Expect = 7.660e-47 Identity = 74/115 (64.35%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNEGVATTLTTLLCLFEPQVKELLGIPEEYATAAHIVAGYPSKPFPTKLTRRPVEEIAFMDSFDNPL 345
++ HP I V C +L THPTDT+L RLS+VGGAS+YP QN CLALR+ G+ATT TTLL +EPQVKELL IPEE+ TA HIVAGYP+KPFPTKL R EE+A++D+F NP+
Sbjct: 112 EHFADHPVIAVVCGDLGATHPTDTELDRLSVVGGASIYPTAQNFCLALRDAGIATTFTTLLVAYEPQVKELLNIPEEFITACHIVAGYPAKPFPTKLNRLAPEEMAYIDTFGNPI 226 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128541.5730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128541.5730.1 >prot_M-pyrifera_M_contig128541.5730.1 ID=prot_M-pyrifera_M_contig128541.5730.1|Name=mRNA_M-pyrifera_M_contig128541.5730.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp QNLEKHPAIIVACAELSETHPTDTDLGRLSIVGGASVYPMVQNLCLALRNback to top mRNA from alignment at M-pyrifera_M_contig128541:3..356+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128541.5730.1 ID=mRNA_M-pyrifera_M_contig128541.5730.1|Name=mRNA_M-pyrifera_M_contig128541.5730.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig128541:3..356+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128541:3..356+ >mRNA_M-pyrifera_M_contig128541.5730.1 ID=mRNA_M-pyrifera_M_contig128541.5730.1|Name=mRNA_M-pyrifera_M_contig128541.5730.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig128541:3..356+ (Macrocystis pyrifera P11B4 male)back to top |