mRNA_M-pyrifera_M_contig128406.5705.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: A0A7S4M724_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M724_9EUKA) HSP 1 Score: 106 bits (264), Expect = 5.550e-25 Identity = 46/83 (55.42%), Postives = 64/83 (77.11%), Query Frame = 1
Query: 1 LADLASEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
L +LA++M++ G+ +K R+Y L++Y F+GS+ + WL K K CS+P ALALGN+L KAGLIHH+VD +KPLLDG+FFY F
Sbjct: 14 LEELATQMLAYDSGLEIKNRRYFLRTYQDCFIGSQLLDWLIKYKQCSRPTALALGNELVKAGLIHHTVDLTKPLLDGYFFYVF 96
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: UPI001CEC968A (hypothetical protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=UPI001CEC968A) HSP 1 Score: 70.1 bits (170), Expect = 4.250e-14 Identity = 32/75 (42.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 25 MSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
M DG+ ++ R++ L YP+ F+GSEAV+WLAK ++ ++ AA +G L + GL HH D+ P D + FYRF
Sbjct: 1 MRSEDGLDIQNRRFRLTVYPNCFVGSEAVTWLAKTQNATREAAARIGQALVEQGLFHHVTDEH-PFKDEYLFYRF 74
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: A0A6I5PMY4_9CYAN (Mechanosensitive ion channel n=1 Tax=Leptolyngbya sp. SIO3F4 TaxID=2607780 RepID=A0A6I5PMY4_9CYAN) HSP 1 Score: 73.9 bits (180), Expect = 1.550e-13 Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 19 EMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
+ M +DGV +K R++ L YP F+GSEAV+WLAK ++ ++ AA+ +G L + G++HH D+ P D + FYRF
Sbjct: 572 QQMRSSDGVAIKDRRFRLTVYPHCFVGSEAVTWLAKTQNATREAAVRIGQALVEQGILHHVTDEH-PFKDEYLFYRF 647
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: A0A8J7BQM4_9CYAN (Mechanosensitive ion channel n=3 Tax=unclassified Trichocoleus TaxID=2628910 RepID=A0A8J7BQM4_9CYAN) HSP 1 Score: 72.0 bits (175), Expect = 7.380e-13 Identity = 30/70 (42.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 40 GVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
G+ ++ R+Y L YP+ F G+EAV W + ++C++ AA+ LG L + G+IHH +D+ +P DG+ FYRF
Sbjct: 617 GLKIQDRRYRLNLYPACFTGAEAVEWFVQTQNCTREAAIRLGQSLIEQGVIHHVLDE-RPFEDGYVFYRF 685
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: A0A2N2TXN8_9PROT (DEP domain-containing protein n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TXN8_9PROT) HSP 1 Score: 71.2 bits (173), Expect = 1.120e-12 Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 4 ADLASEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYR 246
A+LA+ + + GV V R+Y LK YP F+G EAV WL R + A+ALG L +AGL+HH+V++ +P DG FFYR
Sbjct: 177 AELAAALAA---GVKVADRRYRLKKYPECFVGGEAVDWLIGRYRVGRDDAVALGEALRRAGLLHHAVNE-QPFRDGEFFYR 253
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: UPI0019E42144 (Protein kinase n=1 Tax=Gloeomargaritaceae cyanobacterium C42_A2020_066 TaxID=2747801 RepID=UPI0019E42144) HSP 1 Score: 71.2 bits (173), Expect = 1.320e-12 Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query: 7 DLASEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
DL + + P G ++ R+YLLK YP +F+GSEA +W+ + + A+ LG L GLIHH VD + DGF+FYRF
Sbjct: 326 DLITRLRGP-QGFGIRDRRYLLKVYPRTFVGSEATTWMVRNLGLDRIEAVTLGQALLTRGLIHHVVD-AHSFRDGFYFYRF 404
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: A0A1X6NPT4_PORUM (Aurora kinase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPT4_PORUM) HSP 1 Score: 68.6 bits (166), Expect = 1.240e-11 Identity = 37/85 (43.53%), Postives = 48/85 (56.47%), Query Frame = 1
Query: 1 LADLA---SEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYR 246
+AD A M GVPV R+Y LK+YP +F+GSEAVSW+ K S AA+ LG + AG+ HH V + D + FYR
Sbjct: 638 IADFARVYEAMRDKRSGVPVADRRYRLKTYPRTFVGSEAVSWMVKNLHLSHSAAMELGQDMVNAGVFHH-VCHAHNFKDEYLFYR 721
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: L8GFA4_ACACA (Protein kinase 2, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFA4_ACACA) HSP 1 Score: 67.0 bits (162), Expect = 4.270e-11 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 7 DLASEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLA-KRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
+L ++M P GVPV+ RK+ L++Y F+GSEAV WL K K + AL++G ++ + H VD ++ DGF FY F
Sbjct: 177 ELVADMCHPATGVPVRDRKWRLRTYRKCFVGSEAVDWLMLKLKLDDRSDALSVGQEIMRLQYFRHVVDDTRQFEDGFLFYAF 258
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: UPI001C014D8D (mechanosensitive ion channel n=1 Tax=Leptothoe spongobia TaxID=2651728 RepID=UPI001C014D8D) HSP 1 Score: 66.2 bits (160), Expect = 7.920e-11 Identity = 29/77 (37.66%), Postives = 50/77 (64.94%), Query Frame = 1
Query: 19 EMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
+ M T G+ ++ R++ L Y + F+GSEAV+WLA+ ++ ++ AA+ +G L + G++HH D+ P D + FYRF
Sbjct: 584 QQMRTTGGLEIQDRRFRLTVYANCFVGSEAVTWLARTQNATREAAVRIGQALVEKGVLHHVTDEH-PFKDEYLFYRF 659
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Match: UPI0019E2F9F0 (Mechanosensitive ion channel protein n=1 Tax=Oscillatoriales cyanobacterium LEGE 11467 TaxID=1828826 RepID=UPI0019E2F9F0) HSP 1 Score: 63.2 bits (152), Expect = 2.280e-10 Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 7 DLASEMMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQLFKAGLIHHSVDKSKPLLDGFFFYRF 249
+L ++M P GV ++ R+Y LK+YPS F+G EAVSW+ + S A+ LG +L +HH D+ P D + FYRF
Sbjct: 105 NLVNQMRQP-GGVAIEDRRYNLKTYPSCFVGREAVSWMMQTLQISHEDAIDLGQKLIDDKWMHHVTDEH-PFRDEYLFYRF 183 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128406.5705.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128406.5705.1 >prot_M-pyrifera_M_contig128406.5705.1 ID=prot_M-pyrifera_M_contig128406.5705.1|Name=mRNA_M-pyrifera_M_contig128406.5705.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp MMSPTDGVPVKTRKYLLKSYPSSFLGSEAVSWLAKRKDCSKPAALALGNQback to top mRNA from alignment at M-pyrifera_M_contig128406:251..499- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128406.5705.1 ID=mRNA_M-pyrifera_M_contig128406.5705.1|Name=mRNA_M-pyrifera_M_contig128406.5705.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=249bp|location=Sequence derived from alignment at M-pyrifera_M_contig128406:251..499- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128406:251..499- >mRNA_M-pyrifera_M_contig128406.5705.1 ID=mRNA_M-pyrifera_M_contig128406.5705.1|Name=mRNA_M-pyrifera_M_contig128406.5705.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig128406:251..499- (Macrocystis pyrifera P11B4 male)back to top |