mRNA_M-pyrifera_M_contig128346.5695.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A3D5DGZ9_9GAMM (Aspartate aminotransferase family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DGZ9_9GAMM) HSP 1 Score: 190 bits (482), Expect = 9.340e-56 Identity = 97/155 (62.58%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
G VPP +YF+ + VL +HG+ VADEVITGFGRTG LFG +TFGLKPDH AK IT YFPLSA+ L R+LY LE GSD +G LAHA+T AAHPVGAAAALK +EIIERD LV HAA++G+ L L GHPLVG +R+ GL ++DFL
Sbjct: 230 GFKVPPPEYFSAITSVLDRHGIDLVADEVITGFGRTGKLFGSQTFGLKPDHMVVAKGITSAYFPLSAVGLNRDLYDALEVGSDNIGTLAHASTMAAHPVGAAAALKVMEIIERDKLVDHAAKMGKRLASGLARLGGHPLVGEIRNLGLGASLDFL 384
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A836X1Y0_9PROT (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836X1Y0_9PROT) HSP 1 Score: 165 bits (418), Expect = 3.800e-46 Identity = 83/155 (53.55%), Postives = 110/155 (70.97%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
GL+ PPA YF +L+ +G+ ++ DEV+TGF RTG+ +G ET+G+ PD AK+IT YFP+SA+A+ E Y LE GSDA+G AHA T+A HPVGAA ALKTIEIIE+ L+ +A +G LG +L + HPLVG VRH GLAG+V+F+
Sbjct: 241 GLLTPPATYFQKLQALLRGYGIRYLDDEVVTGFCRTGNFWGAETYGIDPDCMTMAKSITSAYFPVSAVAMSGEFYEGLEKGSDALGTFAHAGTYAGHPVGAAVALKTIEIIEKRNLLGNARAMGAVLGSKLAGYADHPLVGKVRHVGLAGSVEFV 395
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A1Z8WW51_9GAMM (Uncharacterized protein n=1 Tax=Methylococcaceae bacterium TMED69 TaxID=1986766 RepID=A0A1Z8WW51_9GAMM) HSP 1 Score: 158 bits (400), Expect = 1.000e-43 Identity = 84/154 (54.55%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDF 462
GL VPP +YF ++L QH + VADEV+TGFGRTG ++G E+ DH K IT GYFPLSAIA+G L ++ S + AHAAT+AAHPVGAAAALKT+EIIER+ L+ HAA +G+ L + L HPL+G VR GLA AVDF
Sbjct: 221 GLHVPPKNYFKCLKKLLDQHEIDLVADEVVTGFGRTGRMWGSESVDFSSDHATMGKGITSGYFPLSAIAIGESLQERMKEKSRRINSFAHAATYAAHPVGAAAALKTLEIIEREKLLEHAATIGKLLEKELRPLGEHPLIGDVRFHGLAAAVDF 374
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A800ECX8_9CHLR (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800ECX8_9CHLR) HSP 1 Score: 149 bits (375), Expect = 5.200e-43 Identity = 75/124 (60.48%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVG 372
G +PP YF +L + + FV DEVITGFGRTG+LFG + GLKPDH K +T GYFPLSAI+LG LY LE GS+ GVLAHA T +AHPVGAAAALKT+EIIERD L HA ++G
Sbjct: 27 GFKIPPPGYFERIQTLLLSYEIEFVCDEVITGFGRTGNLFGSDAMGLKPDHVVMGKGMTSGYFPLSAISLGASLYKGLEIGSENHGVLAHAGTFSAHPVGAAAALKTLEIIERDNLTEHAKKMG 150
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: UPI001319F5F1 (aminotransferase n=1 Tax=Bradyrhizobium guangdongense TaxID=1325090 RepID=UPI001319F5F1) HSP 1 Score: 149 bits (376), Expect = 4.280e-41 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
G++VPPA Y+ +VLK++ + VADEVI GFGRTG +FGCET+G+KPD +K IT YFPLSAI L ++ + S+ +GVL H T HPVG+A AL+ ++IIE GLVAHAA +G ++ +L + HPLVG VR G+ A++ +
Sbjct: 111 GVVVPPATYWDKIQKVLKKYDILLVADEVICGFGRTGKMFGCETYGIKPDAMVVSKQITSSYFPLSAIILNDRMFEPIADESNKIGVLGHGFTAGGHPVGSAIALENLKIIEERGLVAHAAELGAYMQGKLRELASHPLVGEVRGVGMIAALELV 265
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: UPI0019087FD4 (aspartate aminotransferase family protein n=1 Tax=Advenella mandrilli TaxID=2800330 RepID=UPI0019087FD4) HSP 1 Score: 152 bits (383), Expect = 4.280e-41 Identity = 73/153 (47.71%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVD 459
G++VPP YF +VLK++ + F+ DEVI GFGRTG +FGC+TF L+PD + AKA++ Y P+SA + + +Y + SD VGV AH T++ HP+ AA AL+TI+I + D +VAH V H +RLHA + HPLVG R GL GA++
Sbjct: 231 GVIVPPEGYFEGVQKVLKKYDILFIVDEVICGFGRTGMMFGCDTFNLQPDIMSVAKALSSSYLPISATMISQAIYDKIAEQSDEVGVFAHGVTYSGHPICAAVALETIKIYQEDNIVAHVQEVAPHFQKRLHALASHPLVGESRGIGLIGAIE 383
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A3B0RNB2_9ZZZZ (Aminotransferase, class III n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RNB2_9ZZZZ) HSP 1 Score: 147 bits (370), Expect = 3.200e-40 Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
G++VPP DYF VL ++ + F++DEVI GFGRTG FG +TF +KPD + AKAIT YFPL AI + +LY + S +G H T+ HPVGAA ALK +EI ERD +V HA +G+ +RL A + HPLVG R G+ GAV+ +
Sbjct: 107 GVIVPPKDYFPKMQVVLDKYDIRFISDEVICGFGRTGEWFGTDTFEMKPDSVSMAKAITSAYFPLGAITIEEDLYQAMLEESKKIGTFGHGYTYTGHPVGAAVALKVLEIYERDNIVGHAKVLGQQFMKRLGALADHPLVGEARGVGMLGAVELV 261
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: Q89MQ8_BRADU (Aminotransferase n=195 Tax=Bradyrhizobiaceae TaxID=41294 RepID=Q89MQ8_BRADU) HSP 1 Score: 149 bits (376), Expect = 4.510e-40 Identity = 75/155 (48.39%), Postives = 104/155 (67.10%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
G++VPPA Y+ VLK++ + VADEVI GFGRTG +FGCET+G+KPD +K IT YFPLSAI + ++ + S+ +GVL H T HPVG+A AL+ ++IIE GLVAHAA +G ++ +L +GHPLVG VR G+ A++ +
Sbjct: 232 GVIVPPATYWDKIQAVLKKYDILLVADEVICGFGRTGKMFGCETYGIKPDAIVVSKQITSSYFPLSAILMNDRMFEPIADESNKIGVLGHGFTAGGHPVGSAIALENLKIIEERGLVAHAAELGGYMQGKLRELAGHPLVGEVRGVGMIAALELV 386
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A7Y2FT17_9HYPH (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y2FT17_9HYPH) HSP 1 Score: 149 bits (376), Expect = 4.580e-40 Identity = 77/155 (49.68%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDFL 465
G++VPP YF + VL ++ V F+ADEVI GFGRTG FG ET G++P + AKAIT YFPL AI + ++Y + S +G H T+ AHPVGAA ALKTIEI +RDG+V HA+++GE RRL A HPLVG R G+ G+ + +
Sbjct: 231 GVLVPPESYFPKINAVLAKYDVRFIADEVICGFGRTGKWFGTETLGMQPTSVSMAKAITSAYFPLGAITIEEDVYQAMLDASRKIGTFGHGYTYTAHPVGAAVALKTIEIYKRDGIVGHASQLGEVFQRRLAALGDHPLVGETRGRGMLGSFEMV 385
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Match: A0A7Y3GXV8_9DELT (Aminotransferase class III-fold pyridoxal phosphate-dependent enzyme n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GXV8_9DELT) HSP 1 Score: 148 bits (373), Expect = 9.970e-40 Identity = 79/154 (51.30%), Postives = 104/154 (67.53%), Query Frame = 1
Query: 1 GLMVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCATAKAITGGYFPLSAIALGRELYADLEAGSDAVGVLAHAATHAAHPVGAAAALKTIEIIERDGLVAHAARVGEHLGRRLHARSGHPLVGHVRHAGLAGAVDF 462
GL++PP Y+A VL ++ + ADEV+TGFGRTGS +G +TFG+ PD K+I+ GYFP+SAIA+ + ++DL GSD + AHA+THA HPVGAA ALK +EIIE+ L+ +A GE L R L + HPLV VR GLA AV+F
Sbjct: 223 GLVIPPESYWAKLQAVLAKYDILCFADEVVTGFGRTGSWWGSQTFGIVPDAVTVGKSISAGYFPVSAIAMSGDFFSDLVRGSDKLDGFAHASTHAGHPVGAAIALKVLEIIEKRALIDNARARGEELLRGLQRYADHPLVVDVRGVGLAAAVEF 376 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128346.5695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128346.5695.1 >prot_M-pyrifera_M_contig128346.5695.1 ID=prot_M-pyrifera_M_contig128346.5695.1|Name=mRNA_M-pyrifera_M_contig128346.5695.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp MVPPADYFANASRVLKQHGVSFVADEVITGFGRTGSLFGCETFGLKPDHCback to top mRNA from alignment at M-pyrifera_M_contig128346:24..488- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128346.5695.1 ID=mRNA_M-pyrifera_M_contig128346.5695.1|Name=mRNA_M-pyrifera_M_contig128346.5695.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig128346:24..488- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128346:24..488- >mRNA_M-pyrifera_M_contig128346.5695.1 ID=mRNA_M-pyrifera_M_contig128346.5695.1|Name=mRNA_M-pyrifera_M_contig128346.5695.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig128346:24..488- (Macrocystis pyrifera P11B4 male)back to top |