mRNA_M-pyrifera_M_contig128242.5681.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A2E8LDZ8_9ACTN (Cysteine--tRNA ligase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LDZ8_9ACTN) HSP 1 Score: 317 bits (811), Expect = 7.250e-105 Identity = 149/167 (89.22%), Postives = 153/167 (91.62%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
FIQTL+DNGSAY DSGVYLRVH VDGYG LVHRSLDDLREGAGARV+VD KEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSL +LGDGFDLHGGG DLVFPHHTNERAEAIAAGR FARHW HNAMLNI GEKMSKSL NFTT+Q LLDEHP NARA
Sbjct: 124 FIQTLIDNGSAYANDSGVYLRVHTVDGYGDLVHRSLDDLREGAGARVEVDDTKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLGILGDGFDLHGGGNDLVFPHHTNERAEAIAAGRDFARHWAHNAMLNISGEKMSKSLGNFTTIQALLDEHPDNARA 290
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A7X6APJ5_9ACTN (Cysteine--tRNA ligase (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APJ5_9ACTN) HSP 1 Score: 305 bits (782), Expect = 2.210e-101 Identity = 143/167 (85.63%), Postives = 151/167 (90.42%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
F+Q L+D +AYVTDSGVYLRV V GYG LVHRSLDDLR+GAGARV+VD KEDPLDFALWKAAKPGEP WPSPWG+GRPGWHIECVAMSL +LGDGFDLHGGG DLVFPHHTNERAEAIAAGR FARHWMHNAMLNIGGEKMSKSL NF TV+DLLDEHPLN RA
Sbjct: 123 FVQALIDRSAAYVTDSGVYLRVKDVPGYGELVHRSLDDLRKGAGARVEVDEAKEDPLDFALWKAAKPGEPAWPSPWGEGRPGWHIECVAMSLGILGDGFDLHGGGDDLVFPHHTNERAEAIAAGRDFARHWMHNAMLNIGGEKMSKSLGNFRTVRDLLDEHPLNGRA 289
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A520XY28_9ACTN (Cysteine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XY28_9ACTN) HSP 1 Score: 307 bits (787), Expect = 2.650e-101 Identity = 141/167 (84.43%), Postives = 156/167 (93.41%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
FIQ LVDNG+AYVTD+GVYLRV +++ YGAL+HR+ D+L EGAGARV+VD +KEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIEC AMSL +LGDGFDLHGGGTDLVFPHHTNERAEAIAAGR F+R+WMHNAMLNI GEKMSKSLNNF T+QD+LDEHPLNARA
Sbjct: 123 FIQVLVDNGAAYVTDAGVYLRVRSIEDYGALIHRTHDELAEGAGARVEVDPNKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECAAMSLGILGDGFDLHGGGTDLVFPHHTNERAEAIAAGRTFSRYWMHNAMLNIDGEKMSKSLNNFATIQDVLDEHPLNARA 289
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A6B1AU85_9ACTN (Cysteine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AU85_9ACTN) HSP 1 Score: 298 bits (762), Expect = 2.680e-97 Identity = 138/167 (82.63%), Postives = 151/167 (90.42%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
FI TL+DNGSAY T+SGVYLRV +V GYG LVHRS D+L EG+GARV+VD KEDPLDFALWK+AKP EPTWPSPWG GRPGWHIECVAMSL +LGDGFDLHGGG DLVFPHHTNERAEAIAAGR FA+HW+HNAMLN+GGEKM+KSL NF TV+DLLDEHPLNARA
Sbjct: 124 FIATLMDNGSAYATESGVYLRVRSVPGYGDLVHRSFDELAEGSGARVEVDEHKEDPLDFALWKSAKPDEPTWPSPWGPGRPGWHIECVAMSLGILGDGFDLHGGGDDLVFPHHTNERAEAIAAGRPFAQHWLHNAMLNVGGEKMAKSLGNFRTVRDLLDEHPLNARA 290
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A358A0Q7_9ACTN (Cysteine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A0Q7_9ACTN) HSP 1 Score: 291 bits (745), Expect = 1.080e-96 Identity = 136/153 (88.89%), Postives = 141/153 (92.16%), Query Frame = 1
Query: 43 DSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
DSGVYLRVH VDGYG LVHRSLDDLR+GAGARV+VD KEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSL +LGDGFDLHGGG DLVFPHHTNERAEAIAAGR FA+HW HNAMLNI GEKMSKSL NFTT+Q LLDEHP NARA
Sbjct: 3 DSGVYLRVHTVDGYGDLVHRSLDDLRDGAGARVEVDDTKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLGILGDGFDLHGGGNDLVFPHHTNERAEAIAAGRDFAQHWAHNAMLNISGEKMSKSLGNFTTIQTLLDEHPDNARA 155
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A7Y3A8K1_9ACTN (Cysteine--tRNA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3A8K1_9ACTN) HSP 1 Score: 293 bits (751), Expect = 8.410e-96 Identity = 136/167 (81.44%), Postives = 150/167 (89.82%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
FI L+DNGSAY TDSGVYLRV V YG L+ R+ DDL EGAGARV+VD KEDPLDFALWKAAKPGEP+WP+PWG+GRPGWHIECVAMSL +LGD FDLHGGGTDL+FPHHTNERAEAIAAGR+F+R+WMHNAM+NI GEKMSKSLNNFTTV DLL+EHPLNARA
Sbjct: 124 FISVLLDNGSAYATDSGVYLRVRTVTDYGGLIGRTHDDLAEGAGARVEVDETKEDPLDFALWKAAKPGEPSWPAPWGEGRPGWHIECVAMSLGILGDDFDLHGGGTDLIFPHHTNERAEAIAAGRRFSRYWMHNAMVNIAGEKMSKSLNNFTTVADLLEEHPLNARA 290
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A6B1E9C4_9ACTN (Cysteine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9C4_9ACTN) HSP 1 Score: 275 bits (703), Expect = 1.340e-88 Identity = 127/167 (76.05%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
F+ ++D G+AY T +GVYLRV +V GYG LVHR LDDLR AGARV+VD DKEDPLDFALWKAAKP EP+WPSPWG GRPGWHIECVAMSL +LGD FD+HGGG DLVFPHHTNERAEA+A GR FARHW+HNAMLNI G KMSKSL N+ TV ++LDEHPLN RA
Sbjct: 126 FVGRIMDAGAAYTTGTGVYLRVGSVHGYGDLVHRGLDDLRASAGARVEVDEDKEDPLDFALWKAAKPDEPSWPSPWGPGRPGWHIECVAMSLGILGDDFDIHGGGNDLVFPHHTNERAEALAVGRPFARHWVHNAMLNIEGTKMSKSLGNYRTVVEMLDEHPLNGRA 292
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A6N9EQU2_9ACTN (Cysteine--tRNA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EQU2_9ACTN) HSP 1 Score: 274 bits (700), Expect = 4.370e-88 Identity = 127/167 (76.05%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
F+ ++D G AY T +GVYLRV V GYG LVHR LDDLR AGARV+VD KEDPLDFALWKAAKP EP+WPSPWG GRPGWHIECVAMSL +LGDGFD+HGGG DLVFPHHTNERAEA+A GR FARHW+HNAMLNI G KMSKSL N+ TV ++LDEHPLN RA
Sbjct: 126 FVARIMDAGVAYTTPTGVYLRVRDVPGYGDLVHRDLDDLRASAGARVEVDEAKEDPLDFALWKAAKPDEPSWPSPWGPGRPGWHIECVAMSLGILGDGFDIHGGGNDLVFPHHTNERAEALAVGRSFARHWVHNAMLNIEGTKMSKSLGNYRTVVEMLDEHPLNGRA 292
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A7K2E8D0_9ACTN (Cysteine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E8D0_9ACTN) HSP 1 Score: 271 bits (692), Expect = 1.970e-86 Identity = 126/167 (75.45%), Postives = 139/167 (83.23%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
F+ ++D G AY T +GVYLRV V GYG LVHR LDDLR AGARV+VD KEDPLDFALWKAAKP EP+WPSPWG GRPGWHIECVAMSL +LGDGFD+HGGG DLVFPHHTNERAEA+A GR FARHW+HNAMLNI G KMSKSL N+ TV ++LDEHP N RA
Sbjct: 124 FVARIMDAGVAYTTPTGVYLRVRDVPGYGDLVHRDLDDLRASAGARVEVDEAKEDPLDFALWKAAKPDEPSWPSPWGPGRPGWHIECVAMSLGILGDGFDIHGGGNDLVFPHHTNERAEALAVGRSFARHWVHNAMLNIEGTKMSKSLGNYRTVVEMLDEHPDNGRA 290
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Match: A0A7K2A292_9ACTN (Cysteine--tRNA ligase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A292_9ACTN) HSP 1 Score: 266 bits (679), Expect = 1.060e-84 Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 1
Query: 1 FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDSDKEDPLDFALWKAAKPGEPTWPSPWGDGRPGWHIECVAMSLDVLGDGFDLHGGGTDLVFPHHTNERAEAIAAGRQFARHWMHNAMLNIGGEKMSKSLNNFTTVQDLLDEHPLNARA 501
F+ ++D G+AY T +GVYLRV V GYG LV R LDDLR AGARV+VD KEDPLDFALWKAAKP EP+WPSPWG GRPGWHIECVAMSL +LGD FD+HGGG DLVFPHHTNERAEA+A GR FARHW+HNAMLNI G KMSKSL N+ TV ++LDEHP N RA
Sbjct: 142 FVAQIMDAGAAYTTPTGVYLRVGDVSGYGDLVRRDLDDLRASAGARVEVDEAKEDPLDFALWKAAKPDEPSWPSPWGPGRPGWHIECVAMSLGILGDDFDIHGGGNDLVFPHHTNERAEALAVGRSFARHWVHNAMLNIEGTKMSKSLGNYRTVVEMLDEHPDNGRA 308 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128242.5681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128242.5681.1 >prot_M-pyrifera_M_contig128242.5681.1 ID=prot_M-pyrifera_M_contig128242.5681.1|Name=mRNA_M-pyrifera_M_contig128242.5681.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp FIQTLVDNGSAYVTDSGVYLRVHAVDGYGALVHRSLDDLREGAGARVDVDback to top mRNA from alignment at M-pyrifera_M_contig128242:1..501- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128242.5681.1 ID=mRNA_M-pyrifera_M_contig128242.5681.1|Name=mRNA_M-pyrifera_M_contig128242.5681.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig128242:1..501- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128242:1..501- >mRNA_M-pyrifera_M_contig128242.5681.1 ID=mRNA_M-pyrifera_M_contig128242.5681.1|Name=mRNA_M-pyrifera_M_contig128242.5681.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig128242:1..501- (Macrocystis pyrifera P11B4 male)back to top |