mRNA_M-pyrifera_M_contig12822.5673.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12822.5673.1
Unique NamemRNA_M-pyrifera_M_contig12822.5673.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: D8LSW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSW8_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 6.250e-176
Identity = 340/637 (53.38%), Postives = 377/637 (59.18%), Query Frame = 1
Query:    1 IWRELRHLSLSELAVVVSCVLSGDPLPKFLAQPL--RCGKAGSKANRGGGRTGSSRXXXXXXXXXXXXXXXASHRRGNGGV----------AGLSDEAQSSPSRRNAMRGAWQYAHALRRRLDRVNRTASLVSYEELEENTVPKAKAERVRRRMHYAMSLQGFQATVTAERRPSPAASAASGYEGGAXXXMXXXXXAGSAGIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCAREGLRTPSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKGM-STVGVLVYLDGSHPFRSWDGDMVR-ARVYFSVDGRL--------VHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSIIDLP 1845
            IW ELRHLSL+ELAVV+SCV++G+PLP FL  P        GS    GGGR G+SR                    G GG           AG  D+           R AWQ AHA+RRRLDRVNRTASLVSYEE  E+ VP+AKA+RVRRRMHYAMSLQ FQATVT + + S  A + +  E G           G +  FMCTPQSFPPTPVSRAHV+ARTS+FSDD+LFLARD LRLGENLKPGVDETTRATA FL  QQRLAVLDGH +CEGI LTCGHHRATK G SLYSS RAMVPVLRNRHVYFQVSC REG   PSIGVGLSTPEMPLSTLVGAFSNS+G CSTGQ+LMSSRWYG PGE+A+RK GM +TVGVLVYLDGS PFRSWDGDM++ A   F+             VHV    G                        XXXXXXXXXXX                           A A G+  GG                                      G ++  DV                        P  SAALGLALPKDRDLFPTVTIHS  TEI+CRFCA DLL V+RE+MGAP   P+YALDGS+I+LP
Sbjct:  335 IWSELRHLSLAELAVVISCVVTGNPLPDFLLDPDYDSVDSGGSSYGGGGGRLGNSRRIFSRSSRGSPGLESG----GGGGFLSDYLRGPSSAGYPDDEFYRSGGAGGTRVAWQQAHAMRRRLDRVNRTASLVSYEERAESAVPRAKAQRVRRRMHYAMSLQCFQATVTKDGQHSAGAGSDAIGEDGDDDDDGRVSVEGGSSAFMCTPQSFPPTPVSRAHVMARTSQFSDDVLFLARDHLRLGENLKPGVDETTRATADFLRRQQRLAVLDGHDACEGIVLTCGHHRATKVGPSLYSSARAMVPVLRNRHVYFQVSCVREGPLAPSIGVGLSTPEMPLSTLVGAFSNSVGFCSTGQILMSSRWYGEPGEFAMRKAGMMTTVGVLVYLDGSRPFRSWDGDMLQQASATFAASAXXXXXXXXXXVHVQQDHGEEACLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGIGRGG--------------------------------------GTMLPPDV------------------------PETSAALGLALPKDRDLFPTVTIHSPNTEILCRFCAEDLLGVTRENMGAPPGAPVYALDGSLINLP 905          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A836CEG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG7_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.090e-82
Identity = 180/474 (37.97%), Postives = 232/474 (48.95%), Query Frame = 1
Query:  424 MHYAMSLQGFQATVTAERRPSPAASAASGYEGGAXXXMXXXXXAGSAGIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPG-VDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVS-LYSSVRAMVPVLRNRHVYFQVSCAREGLRTPSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYG-LPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            MHY + L  FQATV  +       +     E GA          G   ++MCTPQSFPPTPVSRA V++R+++FSDD+LFLARD LRL E  +    DET+R TA FL +Q RLAVL+GH + +GI+LTCGHH A KTG + LYSSVRAMVPVLRNR+V+ Q S A +    PS+ +GLSTPEMPL+TLVG +S+SIGL S+GQ+L+SSRWY  +PG         ST+GVLV+LDGS    SWDG+MV A + +SVDG+ V  +                                                              R +  LAA                                                                                 A+ L LP+DRDLFPT+T+HS  T++ CRFCA D++  +R  +GAP  V +YALDGS++
Sbjct:    2 MHYDVPLHPFQATVAVDPHSISPLTGHGVDELGALST-------GGMALYMCTPQSFPPTPVSRACVMSRSTQFSDDVLFLARDHLRLDEQCRSRHSDETSRLTAEFLRSQARLAVLNGHAAADGISLTCGHHCAAKTGTAQLYSSVRAMVPVLRNRYVFCQFSVAAQEAIVPSLSIGLSTPEMPLNTLVGTWSHSIGLSSSGQILLSSRWYSCVPGRGTFGVG--STIGVLVFLDGSKVIPSWDGEMVTAYITYSVDGQPVRTTQ-------------------------------------------------------------RPQALLAA-------------------------------------------------------------------AQXXXXXXXXXXXYAMALPLPRDRDLFPTLTLHSPLTQVFCRFCAADMVHATRAQIGAPPGVVVYALDGSVV 338          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S4AGD9_9STRA (Hypothetical protein n=3 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGD9_9STRA)

HSP 1 Score: 244 bits (623), Expect = 4.740e-67
Identity = 183/527 (34.72%), Postives = 256/527 (48.58%), Query Frame = 1
Query:  316 LRRRLDRVNRTASLVSYEELEENT--VPKAKAERVRRRMHYAMSLQGFQATV----TAERRPSPAASAASGYEGGAXXXMXXXXXAGSA--------GIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSC-AREG--LRT--PSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKG-MSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            L R+L+ +N  A +VSY EL++N   + +    RV+R MHY +SL+ F ATV    + +++  PA +       G    +     AG A        G FMCTPQSFPPTP SRAHVL R S+F+DD++FLARDQLR+ + L+   +E TR  A  L   +RLAV D   +  GI L+CG H ATK G  LY S+R+MVP+LRN  VYF+++   R G  L+T   ++  GLST EMP  TLVGA+  S+GLC+TGQ+L+S +W     +  +   G   T+G LV LD S  F +WDG M+ A V F+++GR+V  SP                                             +VPS LP  + F R+                                                                            TS+PVV  A   S  L L +P + +L+PT+T+HS  T ++CRF A D++  SR+++GAP  VP+YA+DGS++
Sbjct:  459 LLRKLNNLNSAAPVVSYTELDDNDGGLSRHAKSRVQRMMHYDVSLRPFVATVQLRESFKKQTHPARTC------GTDSVVDYDADAGEASTTSSPLEGPFMCTPQSFPPTPASRAHVLKRGSRFADDVVFLARDQLRVHDGLESS-NERTREMAEALTHGKRLAVFDADDASAGIDLSCGQHVATKVGPLLYCSLRSMVPILRNCFVYFEMTVLGRSGGVLQTGMATLSFGLSTKEMPTDTLVGAWKGSVGLCTTGQILISGQWCSPGPDPTISSFGDRETIGCLVCLDDSSAFETWDGVMITATVTFNINGRIV--SP---------------------------------------------HVPS-LPTISGFDRR--------------------------------------------------------------------------PATSIPVVGTAVPPSFTLPLLVPAEEELYPTLTLHSPGTSVMCRFSAGDVVSRSRDAIGAPKKVPVYAVDGSLV 856          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S0XKD6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0XKD6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 8.500e-63
Identity = 184/517 (35.59%), Postives = 249/517 (48.16%), Query Frame = 1
Query:  316 LRRRLDRVNRTASLVSYEELEENT--VPKAKAERVRRRMHYAMSLQGFQATVTAERRPSPAASAASGYEGGAXXXMXXXXXAGSA--GIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCARE--GLRTPS---IGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKG-MSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            L ++L+ +N  A +VSY EL +N   + +    RV+R MHY +SL+ F AT+  +      +   + Y    XXX XXXX + S   G FMCTPQSFPPTP SRAHVL R S+F+DD++FLARDQLR+ + L+   +E TR  A  L   +RLAV D   +C GI L+CG H ATK G  LY S R+MVP+LRN  VYF+++      GL  PS   +  GLST EMP +TLVGA+  S+GLC+TGQ+L+S +W     + ++   G   TVG LV LD S  F +W+G M+ A V F+++GR+V  SP L  P AP                                                              V G G                                                         G  L     +   P  S +L L +P + +L+PT+T+HS  T ++CRF A D+  VSRE+ GAP  V +YA+DGSI+
Sbjct:  357 LLQKLNDLNSAAPVVSYTELGDNDGGLSRHAKNRVQRMMHYDVSLRPFVATIKLQETFKKESQRNNDYSFXXXXXXXXXXDSSSTLDGPFMCTPQSFPPTPASRAHVLKRGSRFADDVVFLARDQLRVHDALESS-NERTREMAQALTHGKRLAVFDADDACAGIDLSCGQHVATKVGNLLYCSSRSMVPILRNCFVYFEMTVLGRSGGLIQPSMTTLSFGLSTKEMPSTTLVGAWKGSVGLCTTGQILISGQWCSPGPDPSIGPFGDRETVGCLVCLDDSSAFETWEGVMITATVIFNINGRIV--SPHL--PSAP--------------------------------------------------------------VSGPG---------------------------------------------------------GHPLAPAQTIGAVPV-SCSLPLLVPAEEELYPTLTLHSPGTSVMCRFSAGDVTAVSREATGAPPGVAVYAVDGSIV 748          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A1E7F3C2_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3C2_9STRA)

HSP 1 Score: 222 bits (565), Expect = 9.840e-60
Identity = 165/517 (31.91%), Postives = 240/517 (46.42%), Query Frame = 1
Query:  316 LRRRLDRVNRTASLVSYEELEENT--VPKAKAERVRRRMHYAMSLQGFQATVTAERRPSPAASAASGYEGGAXXXMXXXXXAGSAGIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSC-AREG------LRTPSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKG-MSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            L ++L  +N    ++ Y E+ +N   +   +  RV+R MHY +SL+ F ATV  +      ++   G +            +   G FMCTPQSFPPTP SRAHVL R S+F+DD++FLARDQLR+ + L+   +E TR  A  L   +RLAV D   +  GI L+CG H ATK G  LY S R+MVP+LRN  VYF+++   R G          ++  GLST EMP +TLVGA+  S+GLC+TGQ+L++ +W  +  +  +   G   TVG LV LD S  F +WDG M+ A + F+++GR+V  SP +  P  P G            D++P                                                                                                            +L  +PV +  P  S  L L +P + +L+PT+T+HS  T ++CRF A D++  SRE +G P +V +YA+DGS++
Sbjct:  331 LLKKLSSLNSAGRVIKYTEIGDNDGGLTGKEKRRVQRMMHYDVSLRPFVATVKLQESFKQDSTTNDGSDSVGDYNETSSSSSPLDGPFMCTPQSFPPTPASRAHVLKRGSRFADDVVFLARDQLRVHDGLESS-NERTREMAHALTEGKRLAVFDADDASAGIDLSCGQHVATKVGNLLYCSSRSMVPILRNCFVYFEMTVLGRSGGGFIPQTSMATLSFGLSTKEMPPNTLVGAWKGSVGLCTTGQILIAGQWCSVGQDPTITPFGDRETVGCLVCLDDSSAFETWDGVMITATITFNINGRIV--SPHV--PCLPTGL-----------DQHPQT---------------------------------------------------------------------------------------------------------SKLPDVPVGATPP--SFTLPLLVPAEEELYPTLTLHSPGTSVMCRFSAEDIIARSREDIGVPPNVAVYAVDGSLV 724          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S1GME5_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GME5_CYCTE)

HSP 1 Score: 214 bits (544), Expect = 2.240e-59
Identity = 172/534 (32.21%), Postives = 241/534 (45.13%), Query Frame = 1
Query:  316 LRRRLDRVNRTASLVSYEELEENTVPKAKAERVRRRMHYAMSLQGFQATVTA----------------------ERRPSPAASAASGYEGGAXXXMXXXXXAGSAGIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCAREGLRTPS----IGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKG-MSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            L R+L   N    ++ Y E  E  + +    RV+R MHY +SL+ F ATV                        E + SP++S A           XXXXX      FMCTP+SFPPTP SR+ V+AR ++F++D++FLARD+LR+ + L    DE TR  A+ L    RLAV        GI LTCG H ATK G  LY S ++MVPVLRN  VYF+++     +   +    + +GLST EMPL+TLVGA+  S+GLCSTGQ+L + +W   P + +L   G  +T+G LV+LD      +WDG MV A V F+V+G  V     + P +   G+                                        PGS   +R+L                           V P  A                                          T+LP             L +P + +LFPT+T+HS  TE++CRF + D+++ SRES+GAP    +YA+DGS++
Sbjct:   21 LLRKLSSTNAAGQVIQYMERSEEALTRQARRRVQRMMHYEVSLRPFVATVVGPSHREEAFGNVDVMTNRDNFREESKHSPSSSNA-----------XXXXXXXXDSPFMCTPKSFPPTPGSRSIVMARGTRFAEDVVFLARDKLRIQDGLDSS-DERTREMASALKKASRLAVFHAADVGNGIALTCGQHVATKVGNVLYCSTKSMVPVLRNCFVYFEMTVLPSNMMLQTSMATLSIGLSTSEMPLNTLVGAWKGSVGLCSTGQLLAAGQWCS-PLDPSLSSYGDNATIGCLVHLDDGSAIETWDGVMVTASVTFNVNGTTVSPPVRMSPMLGGLGTP---------------------------------------PGSMDPSRRL---------------------------VGPVPAT-----------------------------------------TTLP-------------LLVPLEEELFPTLTLHSPATEVMCRFSSEDIIETSRESIGAPRGATVYAIDGSVV 421          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S1ZBD0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZBD0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.570e-58
Identity = 179/564 (31.74%), Postives = 252/564 (44.68%), Query Frame = 1
Query:  322 RRLDRVNRTASLVSYEELEENTVPKAKAERVRRRMHYAMSLQGFQATVTAERRP----------------------------SPAASAASGYEGG-----------AXXXMXXXXXAGSA------GIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCAREGLRTPSIG--------------VGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            RRL+R++  + ++SY E E   + +   +RV+R MHY +SL+ F ATVTA R+                             +P  SA    + G           A         A +         FMCTP+SFPPTP SR+ V+ R S+F+++++FLARD+LR+ E L    +  TRA A  L    RLAV +   +  GI LTCG H ATK G  LY S R+M+P+LRN +VYF++S       TP +G              +GLST EMPL+TLVGA+  S+GLC+TGQ+L + +W     +         TVG LV LD    F +WDG+MV A   F+V+G +V + PG    +   G                             V+Q       PL G    +    S      GV                                           G M       +V   G+  E       V  +P   + L L +P++ +LFPT+T+HS  TE++CRF A D+L  SR S+GAP+ V IY +DGS++
Sbjct:   48 RRLNRMDHASRVISYSEREGEVLTQHAKKRVQRMMHYHVSLRPFVATVTAPRKKKQHLRQTQRANSFGNHDFPTNNDREFGTAPYHSALDLCDNGDSLENENVLSHALPCPSPSTEASTTDPSPTDSPFMCTPKSFPPTPSSRSVVMERGSRFAENVVFLARDRLRVEEALYSS-NAQTRAMAMALKQGSRLAVFNASDAAGGIALTCGQHCATKVGNFLYCSTRSMIPILRNCYVYFEMSV----FSTPMVGNSMMLPHASVATLSIGLSTLEMPLNTLVGAWKGSVGLCTTGQILTAGQWCSPLNQQLSSYGNNCTVGCLVCLDDLSAFETWDGEMVTAIATFNVNGNVV-MPPGCATQMGGGG-----------------------------VQQ------EPLGGGFGMSSSATSL-FQTPGV-------------------------------------------GRMSHSSNSQSVLHHGQTDET-----GVMHSPYAPSTLPLLVPREEELFPTLTLHSPGTEVMCRFSAGDVLARSRASIGAPSGVTIYGVDGSVL 521          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S2Y7S9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y7S9_9STRA)

HSP 1 Score: 214 bits (545), Expect = 4.820e-58
Identity = 186/568 (32.75%), Postives = 267/568 (47.01%), Query Frame = 1
Query:  316 LRRRLDRVNRTASLVSYEELEENT--VPKAKAERVRRRMHYAMSLQGFQATVTAERR-------------PSPAASAASGYEG---------GAXXXMXXXXXAGSAGI------------FMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCAREGLRT----PS---IGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVH----------------VSPGLGPPIAPDGSSGDGSSSAVFP--DENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII 1836
            L ++L  +N  A +V Y E E+NT  + K    +V+R MHY +SL+ F ATV    R               P++ AA G  G         G+           S G             FM TPQSFP TP +R  V+AR  +F+DD++FLARD+LRL ++L+   +E TR  A  L   +RLAV +   +  GI LTCG H ATK G  LY + R+MVPVLRN  VYF+++            PS   + +GLST EMP + LVGA+  S GLC+TGQ+     W           +  +T+G LVYLD S    +W+G +V + + F+V+G LV                  SPG+G P      S D S     P  DE+ A    XXXXXXXE +++ +  P                  ++A    GG+   ++ +S     AP+ A  AS +                     + G       +    +S   +  A      L + +P   +L+PTVT+HS  T ++CRF A D++  S+E++GAP    +YA+DGS+I
Sbjct:   53 LLKKLSAMNDAARVVRYMESEDNTGGLTKHARSKVQRMMHYEVSLRPFVATVRQPNRRRNNGSPDGGSPLQPPSSVAAIGLSGNQQLDNSPSGSSFSPTSHHSVSSDGSTTSASENPSTSPFMYTPQSFPATPQTRQLVMARGGRFADDVIFLARDRLRLHDSLE-SENERTREMAKLLREGKRLAVFNARDTSNGIELTCGQHIATKAGTMLYCTTRSMVPVLRNCLVYFEMTVLPRSFGNMALQPSMTTLSLGLSTEEMPANVLVGAWQGSCGLCTTGQIFAGGEWCAPSDPTVAAYRDGATIGCLVYLDDSSAEDTWEGVLVNSTITFNVNGFLVSPVLSSSIGVAAAAASATSPGMGMP------SDDVSGHMKPPTEDEDAASSATXXXXXXXEDDEIKQSPPVT---------------NVSANSQPGGESPSELGSS-----APYAAVTASTI-----------------PPTTKPGNKKVRSHLVPSTSSAQSLLRADRPPITLSIKVPAAEELYPTVTLHSPATSVMCRFSAEDIVASSKETIGAPEHATVYAVDGSVI 576          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A1Z5KJD3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJD3_FISSO)

HSP 1 Score: 218 bits (554), Expect = 5.580e-58
Identity = 186/546 (34.07%), Postives = 251/546 (45.97%), Query Frame = 1
Query:  280 NAMRGAWQYAHALRRRLDRVNRTASLVSYEELEENT--VPKAKAERVRRRMHYAMSLQGFQATVTAERRPSPAASAASGYEGGAXXXMXXXXX----AGSAGI----FMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEG-ITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCARE-----GLRTPSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPG---GS------AALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVP-IYALDGSIID 1839
            ++ RG       L ++L  +N  A +VSY+E E++T  + +    R RR MHYA+SL+ F ATV   +            EGG    +         + SAG     FMCTPQSFPPTP SR  VL + S+FS+D +F ARD+LRL + L    DE TR  A  L   + LAV D     E  I L CG H ATK G   YS+ R  VP+LRN +VYF++S          +  P++ +GLST EMP +TLVGA+  S+GLC+ GQ+L   +W   P          STVG LV LD    F +WDG M+ A V FSVDGR V                    S  +FP                         PS L        Q ++   L+A V           TS S ++ P    +     GA   SV                          +L + P +S  P    GS      A++ L +P   D+FPTVT+ S  T ++CRF + D+L  SR  +GAP D   +YA+DGS+++
Sbjct:  320 HSKRGTIAVNQKLLKKLSTINDAAFVVSYKEYEDDTGGLTRKAISRTRRMMHYAVSLRPFVATVAVNQ------------EGGGSPMLATNESDSDESDSAGDGDSPFMCTPQSFPPTPHSRQFVLMQKSRFSEDDIFAARDRLRLHDALA-SEDEKTREMAAALKENRILAVFDDRDGRESDIELRCGGHVATKVGSMYYSTARGRVPLLRNCYVYFEMSVLPNIRSIPPITLPTLSIGLSTEEMPPNTLVGAWQGSVGLCTNGQILTGGQWCASPDPALNCYTAGSTVGCLVRLDDDSAFETWDGVMITATVTFSVDGRRV--------------------SPVIFP-------------------------PSDL--------QPKAPPTLSAAV-----------TSTSLDIKPSSLDSKLRTMGASQISVT------------------------PDLLARPPMSFGPPEILGSNPPFPTASVKLLVPAAEDVFPTVTMQSVATSVMCRFSSQDILATSRNMIGAPDDGSLVYAVDGSVLN 764          
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Match: A0A7S3PZ78_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ78_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.630e-57
Identity = 168/538 (31.23%), Postives = 245/538 (45.54%), Query Frame = 1
Query:  325 RLDRVNRTASLVSYEELEENTVPKAKAERVRRRMHYAMSLQGFQATVT--------------AERRPSP---------AASAASGYEGGAXXXMXXXXXAGSAGIFMCTPQSFPPTPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHTQQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYFQVSCAREGLRT-----PSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRWYGLPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLVHVSPGLGPPIAPDGSSGDGSSSAVFPDENPAXXXXXXXXXXXEVEQVTEYVPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAAASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAPGGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPADVPIYALDGSII---DLP 1845
            +L++V   + +V Y E ++  + K   +R++R MHY++ L  F ATV               +ERR +          AA   S               + +   FM TP+SFPPTP SRAHVLAR ++F++D++FLARDQLR+ + +    +  TRA A  L   +RLAV +      GI L+CG H A+K G  LYS+ R+M+PVLRN  VYF+++ +   L +      S+ VGLST EMPL+ LVGA+  S+GLCSTGQ+L  S+W           K  STVG L+YLD    F +WDG MV A V F+VDG+++  +                +S    P +N                                                   DE  ++ S                                           EEG+                 S  + + +P++ ++FPT+T+HSS+TE++CRFCA D+L  SR  +G+P  V +YA+DGS++   DLP
Sbjct:  520 KLNKVGPASKVVKYIERDDEVLTKHAKKRIQRIMHYSVPLHPFVATVEIVPFTSVSSEVTSESERRDTSFEASEFCLDAALPFSRQSSELLFDDRLGRESSAESPFMSTPKSFPPTPSSRAHVLARGTRFAEDVVFLARDQLRVEKGMDSD-NAQTRAMAKALSKGKRLAVFNASDVGAGIQLSCGQHCASKIGNDLYSTARSMIPVLRNSFVYFEMTVSTPPLLSMMLHHASLSVGLSTLEMPLNALVGAWKGSVGLCSTGQMLAGSQWCSPMNPKTYGSK--STVGCLIYLDDDSAFETWDGVMVTANVVFNVDGQVIIPA----------------NSVVSMPSDN---------------------------------------------------DENTMNPS-------------------------------------------EEGQY----------------STVIPIFVPREEEIFPTLTLHSSQTEVLCRFCAEDILATSRSMIGSPRGVTVYAVDGSVLFDEDLP 928          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12822.5673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSW8_ECTSI6.250e-17653.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEG7_9STRA3.090e-8237.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4AGD9_9STRA4.740e-6734.72Hypothetical protein n=3 Tax=Pseudo-nitzschia aust... [more]
A0A7S0XKD6_9STRA8.500e-6335.59Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A1E7F3C2_9STRA9.840e-6031.91Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S1GME5_CYCTE2.240e-5932.21Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S1ZBD0_9STRA2.570e-5831.74Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2Y7S9_9STRA4.820e-5832.75Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5KJD3_FISSO5.580e-5834.07Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3PZ78_9STRA2.630e-5731.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12822contigM-pyrifera_M_contig12822:784..8793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score541.6
Seed ortholog evalue4.8e-151
Seed eggNOG ortholog2880.D8LSW8
Hectar predicted targeting categorysignal peptide
EggNOG OGs2BAEZ@1,2S0VK@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_001690.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons8
Model size1848
Cds size1848
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12822.5673.1prot_M-pyrifera_M_contig12822.5673.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12822 784..8793 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815795.4860477-CDS-M-pyrifera_M_contig12822:783..10271622815795.4860477-CDS-M-pyrifera_M_contig12822:783..1027Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 784..1027 +
1692277573.2801352-CDS-M-pyrifera_M_contig12822:783..10271692277573.2801352-CDS-M-pyrifera_M_contig12822:783..1027Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 784..1027 +
1622815795.5002832-CDS-M-pyrifera_M_contig12822:1762..19741622815795.5002832-CDS-M-pyrifera_M_contig12822:1762..1974Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 1763..1974 +
1692277573.289321-CDS-M-pyrifera_M_contig12822:1762..19741692277573.289321-CDS-M-pyrifera_M_contig12822:1762..1974Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 1763..1974 +
1622815795.5102956-CDS-M-pyrifera_M_contig12822:3151..34151622815795.5102956-CDS-M-pyrifera_M_contig12822:3151..3415Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 3152..3415 +
1692277573.297457-CDS-M-pyrifera_M_contig12822:3151..34151692277573.297457-CDS-M-pyrifera_M_contig12822:3151..3415Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 3152..3415 +
1622815795.520478-CDS-M-pyrifera_M_contig12822:4051..42181622815795.520478-CDS-M-pyrifera_M_contig12822:4051..4218Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 4052..4218 +
1692277573.3059146-CDS-M-pyrifera_M_contig12822:4051..42181692277573.3059146-CDS-M-pyrifera_M_contig12822:4051..4218Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 4052..4218 +
1622815795.5326774-CDS-M-pyrifera_M_contig12822:5036..51781622815795.5326774-CDS-M-pyrifera_M_contig12822:5036..5178Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 5037..5178 +
1692277573.3147988-CDS-M-pyrifera_M_contig12822:5036..51781692277573.3147988-CDS-M-pyrifera_M_contig12822:5036..5178Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 5037..5178 +
1622815795.5463011-CDS-M-pyrifera_M_contig12822:5932..64741622815795.5463011-CDS-M-pyrifera_M_contig12822:5932..6474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 5933..6474 +
1692277573.3241072-CDS-M-pyrifera_M_contig12822:5932..64741692277573.3241072-CDS-M-pyrifera_M_contig12822:5932..6474Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 5933..6474 +
1622815795.5609055-CDS-M-pyrifera_M_contig12822:6558..67211622815795.5609055-CDS-M-pyrifera_M_contig12822:6558..6721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 6559..6721 +
1692277573.3332179-CDS-M-pyrifera_M_contig12822:6558..67211692277573.3332179-CDS-M-pyrifera_M_contig12822:6558..6721Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 6559..6721 +
1622815795.5715888-CDS-M-pyrifera_M_contig12822:8679..87931622815795.5715888-CDS-M-pyrifera_M_contig12822:8679..8793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 8680..8793 +
1692277573.3438845-CDS-M-pyrifera_M_contig12822:8679..87931692277573.3438845-CDS-M-pyrifera_M_contig12822:8679..8793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12822 8680..8793 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12822.5673.1

>prot_M-pyrifera_M_contig12822.5673.1 ID=prot_M-pyrifera_M_contig12822.5673.1|Name=mRNA_M-pyrifera_M_contig12822.5673.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=616bp
IWRELRHLSLSELAVVVSCVLSGDPLPKFLAQPLRCGKAGSKANRGGGRT
GSSRGGGRGRGVGGGRGGGASHRRGNGGVAGLSDEAQSSPSRRNAMRGAW
QYAHALRRRLDRVNRTASLVSYEELEENTVPKAKAERVRRRMHYAMSLQG
FQATVTAERRPSPAASAASGYEGGAGGGMSAGGGAGSAGIFMCTPQSFPP
TPVSRAHVLARTSKFSDDLLFLARDQLRLGENLKPGVDETTRATATFLHT
QQRLAVLDGHHSCEGITLTCGHHRATKTGVSLYSSVRAMVPVLRNRHVYF
QVSCAREGLRTPSIGVGLSTPEMPLSTLVGAFSNSIGLCSTGQVLMSSRW
YGLPGEYALRKKGMSTVGVLVYLDGSHPFRSWDGDMVRARVYFSVDGRLV
HVSPGLGPPIAPDGSSGDGSSSAVFPDENPAAAAAAAPRREEEVEQVTEY
VPSPLPGSASFARQLRSEDALAAGVDGGGDDEEDVSTSDSEEVAPWEAAA
ASAVAGARAGSVNGGCFGGVMDEDVEGGAVAEEGEIGEELTSLPVVSLAP
GGSAALGLALPKDRDLFPTVTIHSSKTEIICRFCAPDLLKVSRESMGAPA
DVPIYALDGSIIDLP*
back to top

mRNA from alignment at M-pyrifera_M_contig12822:784..8793+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12822.5673.1 ID=mRNA_M-pyrifera_M_contig12822.5673.1|Name=mRNA_M-pyrifera_M_contig12822.5673.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8010bp|location=Sequence derived from alignment at M-pyrifera_M_contig12822:784..8793+ (Macrocystis pyrifera P11B4 male)
ATTTGGCGCGAGTTGCGGCATCTGAGTCTGTCGGAGCTGGCCGTGGTCGT CTCGTGCGTGCTCAGCGGCGACCCTCTCCCGAAATTTCTTGCCCAGCCCC TCCGCTGCGGTAAGGCCGGCAGCAAGGCGAACCGCGGCGGCGGCCGCACC GGCAGCAGCCGCGGCGGAGGCCGCGGTCGGGGTGTTGGCGGCGGTCGTGG TGGCGGTGCTAGTCATCGTCGCGGCAATGGTGGTGTTGCCGGCCGTGGCG TCGGCGGTGGCCGTGGTGGAGGTGGTGGTGGCGGCGGCGGCGGCGGCCGT GTTGGTGGTCGCAGTCGCGGTCGCAGTCGCGGTGGTGGTGGTGGTGGCGG CGGCCGCGGTGGCATCGCCAACGAGAGCGTCACGAGCCGCATGAAGCGAG CCTCTTCTTGGTCTTCCCCCGAGGGGGCCGGCAGCTTGCAGTCCGGTGCG CGCTCACGGACACGAGGTATGATGTTGCACCTTGCGGAATCGTGCGCCCT CCTTTCCATCCTTCCTCCCTCCCTTCCGGGTATTGTTGTGTTGGCCGTAC GATGCGGGCGATGAAAGGGCGGGCGGGGGTACTCATGTCATCATGCATTG CCGTACTCGTATGACCTTGAGACCCTCGCATCCCTTTCAGTACCGGGACG GAGCAGGTCGGCTTTTCGTCGGGGAGGGGGGTTGAGGAGAAGCTTTCCCG TCTTGAAGAATACGCAGTACGGGGGCGGGATGCCCGAGCACAAGGGACTA GGGTTCTCTCAGCTCCTGCGATGTACGGATCGAACGCACCAGGCAGATAT GACTGAAATCGCCACAACCACTAGTAAATCCTTTGTGTACCACCCACCCC CCGCCTGCCTGTCCGCTCGCCTGCCCGCCGGACGACGACAATGACGACGA CGACGCTTGCCTTCGTGAAAAAAAACTCCAGAACCGCGCTCGCGCAACCC AGGGAGCAGCCGTGGCCGGGGCTCCAGAGTCTCCGACGAGGCGCAGTCGA GCCCGTCGAGGCGGAACGCCATGCGCGGCGCCTGGCAGTACGCGCACGCG CTGCGGCGGCGCCTGGACCGCGTGAACCGCACGGCGTCATTGGTGTCCTA CGAGGAGCTGGAGGAGAACACGGTTCCGAAGGCGAAGGCGGAACGGGTTC GACGGCGCATGCACTACGCCATGTCCCTTCAGGGTTTCCAGGTGGGTCGA GGATGAGTGGGTAGGGGATGGGGGGTAGGGCGGGGGTAGCGGCGCATGCA CTATGCCATGTCCATGCAGGGTTTCCAGATGGGTGGGTGGTTGGGTGAGC AGTGAAAAGGACAGGGGTGGCGGTGCATGCACTTCTCCATTTGTTTTCAC AGCCTCTAGGTGCGAGCGGGTGGGTGGTGGGGTAGAGTAGGGGTGGCGGC CGCATGCGCTACGCCATGCCTCTTCAGGGTTTCCAGGTGGGGGTTGGGTG AGTGGATGGTTGGGTGGGATTTTGAATGGGGCAAGGGGAGGGGGCGGCCG GCCGAGAGCGTCGATTGTCGGGGCAACCGAACCCGTGAGGGCCCCGACTG GTGCCAGTCACTGCAGCTGTTGGTCGGTGGGAGGGAATATTGTACACCTC GGATAGATCATGATCTATCTGTGTGCAGATAGATCATCTACAGTAGTTCC TCACCTGCCGTCGCGAGAGGTTGTGCAGGGTCTTCCTTATAGGGCAGTTA GATCCAACGGATGGAACACGTGCTAGATCATGCAGGTTGTACGGCTCCCA CCCTGCGACATGAGCTAGATCATACAGATCAATACGAAAATCAGGAAAAG ACCTGCCTTGAAATTTCTAGATCATGAACTGTGGGAATCTTATCTTCCAT CTGTCGGAGGTGTCACCGTAACCGTTACTGATAACGATGAAGATTGCAAG GGTGTTTTTTAGTACCAGTAATGTGTACCTCATCCCTCAGAGCATGTACC TACTTCCTGGTAAGCATACCCCCGGAAGCGTGCACATCTCGGGTAGGTCA TCGATTCCCACGTGATGATCTAGATCTTTCAGAGCGGATAGATGCCTAGT GCTTTGTACCCGTATGATCTAGCTCGTGTCGCCGGGTGGGAGCTGTATAG TTTTACGTGGTCTAGCACATGTTGCCTGGGTTGGGTCTGTACTTACACAG GTCCTGCACGGCATCTCACAAAGGCAGGCAAGGGACCAGATGATCTATAT CATGATCTTTCATGTGTAGATGGTCTGCCTTAAGTGTGAACTGTGGAAGC TCGGGTGTAAAAAGGCTGATGTATAGAGCGTTGCTTACGTAACTGCCGCC GCCGCCGCCGCCACCGCTGCCACCCTGCCCCTGTTTCCTTGCAACGCCCC ATCTCACTGCCGAGACAGGCAACGGTTACCGCGGAGCGTAGGCCTTCGCC GGCCGCAAGCGCAGCCAGCGGATACGAAGGCGGGGCCGGGGGCGGCATGA GCGCGGGGGGGGGTGCGGGATCTGCGGGAATCTTCATGTGCACGCCGCAG TCGTTCCCTCCAACTCCCGTGTCTCGCGCGCACGTCCTGGCACGCACGTC CAAGTTTTCCGACGACTTGTTGTTCCTTGCACGCGACCAGCTCCGGCTGG GGGAGAACCTTAAGCCTGGTGTGGATGAGACGGTGAGAGAGAGGGCCATT GGAAAGTTGGAAGCGGCGAATTGGCAGTGGTTGGTGACATACCGGTGCCT TTCTTTTTTTTTGGGCTGTATAGGGATGAGCTCTTCAACGTCTGGTGGGC CTTTTGTTTTTGTCAGCTGCCCAAAATGTTAGCGGAATTTTACCTTGCGT CACGCCGCGCCCGAACGCCGCCGAAGGGGGGCATTCTACAGTTGTTCAAC TATCTAAATGGTAATTACATTTGCGGACAGAGTGGTACCTGGTATGGTCT GGCAGTACGATGGTTGCGATCTGAGGTCGAAGCCTGCCTGCTTGCCTCCG CATCTGGGAGAAGGAAAATCAGTAGCTGCCGAGAGCAGCGCGGACATGGA GCGCAGTCATGTATGACGTGAGCACCCCCCCCCCCCCCCCCCCCCCCGCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCTTCCCCGGGGNNNNNNNN NNCCCCCCCCCTTCCCCCCCTCCCGGGGGGAGGGAAAAACATGGGCCCCC GAAGCGCGCGGCGACAGGGGGCCCATCCCTGTATCACGGGCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCGGCTCCCCTCCCTCCCGACCCCCTCCCGCA CTTTCTTCCCGGGGGTAGACGCGAGCGACGGCGACCTTCTTGCATACGCA GCAGCGGCTTGCGGTGCTGGACGGGCACCACTCTTGCGAAGGCATTACCC TGACGTGCGGGCATCACCGCGCCACCAAGACCGGAGTGTCGCTCTATAGC TCCGTCCGGGCCATGGTCCCCGTTCTCCGGAACAGGTGCGAGCTCGAAGC ATCCTTTGGGAAGCTCCGGCTATCACCGGTGGGAAGAGCGCATGAGGTGG AGCGGGGGGGCACTAAAGTACTACCAGGGTGCTTACGGAACGCGCGCAGC AGTTTGTGTGTGTGTGTTTGTTATCATGATCGCTGTGTGCGGTGGTGGGG TATGGCGTACGGCGCATATGTCGGACCGTTCAGAGGTGGTCCCTATTTGC TGCGGCACCCGTCAATAGTAGAAAATCGCGTCCGCCCATGAATAGCCGCC GCGGCTGACGTTCGCACGTTTTATATTTGTGCAGCTATTTTTTTGCTCTA TACGGGAAACCACCCTACTCGCAGGCGGAAGTACAAGGAGCGCTCCTCAT GTTCACGTCCGGAGTATATCCCGCATGAGGTCGTATAAACTCGCACTCGT AGTTTTAGTACATGCGGTCGAAGTATCGTGCGTTGGTTGCAAGGCTGAGT TACGACGACATCCTCGATCTCACCTCTCGATCTCACAGCTGATGCTTTTC AATTTTTGTTTTGTTTTGTTTTTTGTTTTTGTACGCACACAACGCGCACC CTCCCTCGCTCGTGGAGCACGCGGGTAGGATGGGGGTAGCGTGTCCTTCG CCGGTCGGGGTGAAAATAAACCTGAAGCTCACCAGTAGTATGTGCAGCGT CCATCGTTGCACGTGTAGTTTCCATGGTTGTTACCGGTGCTGCCCGTGCC GCGCGCGTGCGTCTGCGGCCCCCACTTCACCGGAACCGCCACCCGCGTTT TTTTTTTTTTTTTTCGCCCTCCGGCTTGGGCGTTTTGACGTTTTTTCGCC CAGGCACGTGTACTTTCAGGTGAGCTGTGCGAGGGAAGGCCTTCGGACCC CTAGCATCGGCGTCGGCCTCTCCACGCCGGAGATGCCTCTGAGCACCCTC GTCGGCGCATTCAGCAACTCTATCGGCCTCTGCTCGACGGGACAGGTGAG CCGGGGGGTCCCGCCCGTCAAAAGCGAAGACTGCTGTGTACCTAGCATAT TATTAGTAGTAGGCCCACGCCAGCGGCGCCAGGGCGTGTTGTCAGATATT ACGCTTTTAACGGATGATCTTCTACATGTGTTGGATGGAGCTCATTGGCT CAAGCTGCGCCGCGTTTGGTCAAGGTTGCTCCGCGTTTGGCCCAGGTTGT TCCGCATTGGGCTCAGGTTGCACCGCACCACATCGTACCGACGCATGCAA TAGCAAGCGTACGGTCGGTCGGTCGGTGGCGAAAAGCCTACCCGCGGGTC GTTTTTCTATTCCGATCAACACGGGCAGGGAGAAGCTAACCTACAGTACG ATGCTCTTAGTGGTCAGACTCTCGATCGGGGATAGTTTGACCCACGCCGC GAACTAGCCCCCGTCGTCAAGATCACGACGGCATCATCTTACCGTTCACC GACAACATACGCACGGTCGGTCTCAAGTTTCTTTCGCGCCGGCACCCAAT GTTGTATTCGGTCTCAATTTCTTACCTTCACTCGATGTTTCTCGATCTCA ACCCCATCCCACCGAGACACCCGATGTTTCGATGTTTCAGGTGTCATTTT TATTTCACCACCGACGCTCGGTAGACGTTCCTCGGTGTCAAATATCTCCT CCTTTTTTTTTCGCTCCGCCGCCGCCTCCGCTTTTTTCCACCAACGCCGC CTTCCACCAACGTCCTGACCTGGCCCGACTTCCCTCGGTGGAAACACAGG TCCTCATGTCCTCCCGGTGGTACGGCCTCCCCGGAGAGTACGCCCTCCGA AAGAAAGGCATGAGCACGGTGGGGGTCCTCGTGTACCTCGACGGCTCGCA CCCCTTCCGCTCCTGGGACGGCGACATGGTCAGGGCGCGCGTGTACTTTA GCGTCGACGGCCGGCTGGTGCACGTCTCCCCCGGCCTGGGGCCCCCGATC GCCCCTGATGGGTCCTCCGGAGACGGCTCCTCTTCTGCCGTTTTTCCGGA CGAGAACCCCGCCGCCGCCGCCGCCGCCGCCCCTCGACGGGAGGAGGAGG TGGAGCAAGTCACGGAATACGTTCCGTCGCCGCTGCCGGGGTCTGCGTCG TTTGCGCGGCAACTGCGATCGGAGGACGCGCTAGCGGCCGGCGTGGACGG AGGGGGGGATGACGAGGAGGACGTTTCGACGTCCGATTCCGAGGAGGTCG CCCCGTGGGAAGCGGCGGCGGCTTCCGCCGTGGCGGGAGCGAGGGCGGGG AGCGTAAACGGCGGCTGTTTCGGCGGGGTGATGGACGAGGAGTCGGGTGC GATCGTGAACGTGGCCGGTACGGAGATTTTGAGAAAGGCGGTACCTGCGA GCCGTGCCCGGAAGGCGCAGCGGAGCGTGGAAGGCGGGGCGGTTGCGGAG GAGGGGGAGATAGGCGAGGAGCTAACGTCGCTTCCGGTCGTGTCGTTGGC CCCCGGAGGATCGGCGGCGCTTGGGCTTGCCCTGCCGAAGGACCGAGACC TGTTCCCCACGGTTACGATTCACAGCTCCAAAACGGAGGTGAAAAGTTTT GTGTTTTTTTTTTGTGCATGTGTGGGCGCTTTTTTGCGTCGTGTTGTGTT GCGTTGCGGTTGCGTTGCGTTGCTGCTGTTTGGTGCTGATGGTGTTGGTG TTGCTGCTGGTTTTTGCTGCTGCTGGTGTCGCTGTTGGTGCTGTTGCCGC TCCTATCGCTGCTGCTGCTGCTGCTGCTGCTGTTGAAACAGCGGTTGTGT TGCTGTTGCTGCTCTGGATGAGCAGTGTGTGCACTTTTCGACGGGTCATA AAGTGACGACCGTTCCGCCACGATCGCGTGTGAATGATGGCCCCCATAAC GATTGTTTCTTGCGCTCGCTCACGCGCGCCTATTTCGGCCACGCCGCGAA TTCTCGGCACTTCGCGAGAGGTGCTATTAATATTGATAAGTGTATTTTCG ATGCACGGTACGATGGGGTGCTCACCTCCTGCCTGTAATATTTTCCGAGA CTCCTCCTTGCTCGAGGAGCTGTTGTCCCTTTTAGGACCGCAGTCTCTTT TTGAGGACAAAACACTTGCAATTAGACTGGCTTGTGCCCAAAACCGGACT GCAGTCCTAAAAAGTCCAAAACATCACCTCGATGAAAGTGAAAGTGCAAA ACCTGATAAATTGAGGTACACCACTCTGTCCCAAAATATAAGGATATTTT ATACTAATATTAGTATGATACCAATGGTCCTTATATTGATGGGTATACAA CTGTCCCAAAATATAAGGACTGTTTGTATAAATTATTATTATAGAATACG AACGGTTCTATATAAATAGGTATACCACTCTGTCCCAAAATATAAGGACC GTTTTTATGCTAATACTAGTATACAAACGGTCCTTATATTACTAGGTATA CTACGCTGTCCCAAAATATAAGGACCGTTTGTTTGAATACTACTAACAGT CCTTATATAAATAGGTATACCATTCTGTCCCAAAATGCAAGGACTGTATG AACTGTTAGCGTACAAACGGTCCTTATATAAATAGGTATACCATTCTGTT CCAAAATATAAGGATTGTTTGTATGAACTATTAGCGTACAAACGGCCCTT ATATAAGTAGGTATACCACTCTGTCCCAAAATATAAGGAACGTTTGTACG AATTATTAGTATAGAAACGGTCCCTTTACATCAGGACAAGAGTGGTGAAT ACATCGAAAAATAGCGTTAAAACACAAATGAACATTCCGGCGAGCGAAAC CACGCCACTCTGTCCCTTAATATAAAGACCATTTATATTTAATGTTAGTA TAAGATTGTTCTTTATTCCAAGGGACAGAGTGCTACGGTACCAACTCTGG TGTTTCCAAGCGTCCACGAGCAGCGTGACCGCCCAGCAGTACAACTAGAC CATCTTAAGGCCGTGCCGTGCGACTCCATTGCATCAACCACTGTAAATCA GACACCATGTTGCAGAATATCAGTCCCCCGACCACGCAGTAACCGTTGCT GTATGTAACCGTCACTTGTTTGCGGTTAATTTTGTCCCCTCTGAGGTCTG TTAGTCCCAAGAGGGTTGTCGCCCTTCTAGGGCAAACTGCACTCAGTCCC GTTTTGGGCATGAAACAGTCAAATTCTAAGTAATTTGTCCCCAAGACGGG ACTGCAGTTTTTGCCCCAACTGTAGAAGGGTTGAGGGACCCCACCCCGTC AGTCCCAGTGACAGTTTGACACGAAAGGTGCTGTGTACTCGTACGCGTGC CTCTATCGTAGCGCTGGCGACTTTGTATTACGGTGGTCCATAGTTAAGAG GACCTACGGTACACACAAAACCCTATATATCTGCCTATTTTTACTAACAA TATTTGGTCCTGTTAACTATGGTCCTCCGTAATAGTACCAAAACGGACGT GCAGTGCTAAGGGGGTTAAGGTTGAATAATGCGGCGCGCGCACTAACCCC CCCCCCCGGCTCGTCTGCCCCTCCCCGCCTCTATCTTGCCCTTCAGATCA TATGCCGCTTTTGTGCTCCAGACCTGCTGAAGGTCTCAAGGGAAAGCATG GGCGCGCCTGCTGATGTTCCCATTTACGCGCTGGACGGGAGCATAATCGA CCTCCCGTAG
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12822:784..8793+

>mRNA_M-pyrifera_M_contig12822.5673.1 ID=mRNA_M-pyrifera_M_contig12822.5673.1|Name=mRNA_M-pyrifera_M_contig12822.5673.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3696bp|location=Sequence derived from alignment at M-pyrifera_M_contig12822:784..8793+ (Macrocystis pyrifera P11B4 male)
ATTTGGCGCGAGTTGCGGCATCTGAGTCTGTCGGAGCTGGCCGTGGTCGT
CTCGTGCGTGCTCAGCGGCGACCCTCTCCCGAAATTTCTTGCCCAGCCCC
TCCGCTGCGGTAAGGCCGGCAGCAAGGCGAACCGCGGCGGCGGCCGCACC
GGCAGCAGCCGCGGCGGAGGCCGCGGTCGGGGTGTTGGCGGCGGTCGTGG
TGGCGGTGCTAGTCATCGTCGCGGCAATGGTGGTGTTGCCGGCCATTTGG
CGCGAGTTGCGGCATCTGAGTCTGTCGGAGCTGGCCGTGGTCGTCTCGTG
CGTGCTCAGCGGCGACCCTCTCCCGAAATTTCTTGCCCAGCCCCTCCGCT
GCGGTAAGGCCGGCAGCAAGGCGAACCGCGGCGGCGGCCGCACCGGCAGC
AGCCGCGGCGGAGGCCGCGGTCGGGGTGTTGGCGGCGGTCGTGGTGGCGG
TGCTAGTCATCGTCGCGGCAATGGTGGTGTTGCCGGCCTCTCCGACGAGG
CGCAGTCGAGCCCGTCGAGGCGGAACGCCATGCGCGGCGCCTGGCAGTAC
GCGCACGCGCTGCGGCGGCGCCTGGACCGCGTGAACCGCACGGCGTCATT
GGTGTCCTACGAGGAGCTGGAGGAGAACACGGTTCCGAAGGCGAAGGCGG
AACGGGTTCGACGGCGCATGCACTACGCCATGTCCCTTCAGGGTTTCCAG
TCTCCGACGAGGCGCAGTCGAGCCCGTCGAGGCGGAACGCCATGCGCGGC
GCCTGGCAGTACGCGCACGCGCTGCGGCGGCGCCTGGACCGCGTGAACCG
CACGGCGTCATTGGTGTCCTACGAGGAGCTGGAGGAGAACACGGTTCCGA
AGGCGAAGGCGGAACGGGTTCGACGGCGCATGCACTACGCCATGTCCCTT
CAGGGTTTCCAGGCAACGGTTACCGCGGAGCGTAGGCCTTCGCCGGCCGC
AAGCGCAGCCAGCGGATACGAAGGCGGGGCCGGGGGCGGCATGAGCGCGG
GGGGGGGTGCGGGATCTGCGGGAATCTTCATGTGCACGCCGCAGTCGTTC
CCTCCAACTCCCGTGTCTCGCGCGCACGTCCTGGCACGCACGTCCAAGTT
TTCCGACGACTTGTTGTTCCTTGCACGCGACCAGCTCCGGCTGGGGGAGA
ACCTTAAGCCTGGTGTGGATGAGACGGCAACGGTTACCGCGGAGCGTAGG
CCTTCGCCGGCCGCAAGCGCAGCCAGCGGATACGAAGGCGGGGCCGGGGG
CGGCATGAGCGCGGGGGGGGGTGCGGGATCTGCGGGAATCTTCATGTGCA
CGCCGCAGTCGTTCCCTCCAACTCCCGTGTCTCGCGCGCACGTCCTGGCA
CGCACGTCCAAGTTTTCCGACGACTTGTTGTTCCTTGCACGCGACCAGCT
CCGGCTGGGGGAGAACCTTAAGCCTGGTGTGGATGAGACGACGCGAGCGA
CGGCGACCTTCTTGCATACGCAGCAGCGGCTTGCGGTGCTGGACGGGCAC
CACTCTTGCGAAGGCATTACCCTGACGTGCGGGCATCACCGCGCCACCAA
GACCGGAGTGTCGCTCTATAGCTCCGTCCGGGCCATGGTCCCCGTTCTCC
GGAACAGACGCGAGCGACGGCGACCTTCTTGCATACGCAGCAGCGGCTTG
CGGTGCTGGACGGGCACCACTCTTGCGAAGGCATTACCCTGACGTGCGGG
CATCACCGCGCCACCAAGACCGGAGTGTCGCTCTATAGCTCCGTCCGGGC
CATGGTCCCCGTTCTCCGGAACAGGCACGTGTACTTTCAGGTGAGCTGTG
CGAGGGAAGGCCTTCGGACCCCTAGCATCGGCGTCGGCCTCTCCACGCCG
GAGATGCCTCTGAGCACCCTCGTCGGCGCATTCAGCAACTCTATCGGCCT
CTGCTCGACGGGACAGGCACGTGTACTTTCAGGTGAGCTGTGCGAGGGAA
GGCCTTCGGACCCCTAGCATCGGCGTCGGCCTCTCCACGCCGGAGATGCC
TCTGAGCACCCTCGTCGGCGCATTCAGCAACTCTATCGGCCTCTGCTCGA
CGGGACAGGTCCTCATGTCCTCCCGGTGGTACGGCCTCCCCGGAGAGTAC
GCCCTCCGAAAGAAAGGCATGAGCACGGTGGGGGTCCTCGTGTACCTCGA
CGGCTCGCACCCCTTCCGCTCCTGGGACGGCGACATGGTCAGGGCGCGCG
TGTACTTTAGCGTCGACGGCCGGCTGGTGCACGTCTCCCCCGGCCTGGGG
CCCCCGATCGCCCCTGATGGGTCCTCCGGAGACGGCTCCTCTTCTGCCGT
TTTTCCGGACGAGAACCCCGCCGCCGCCGCCGCCGCCGCCCCTCGACGGG
AGGAGGAGGTGGAGCAAGTCACGGAATACGTTCCGTCGCCGCTGCCGGGG
TCTGCGTCGTTTGCGCGGCAACTGCGATCGGAGGACGCGCTAGCGGCCGG
CGTGGACGGAGGGGGGGATGACGAGGAGGACGTTTCGACGTCCGATTCCG
AGGAGGTCGCCCCGTGGGAAGCGGCGGCGGCTTCCGCCGTGGCGGGAGCG
AGGGCGGGGAGCGTAAACGGCGGCTGTTTCGGCGGGGTGATGGACGAGGA
GTCCTCATGTCCTCCCGGTGGTACGGCCTCCCCGGAGAGTACGCCCTCCG
AAAGAAAGGCATGAGCACGGTGGGGGTCCTCGTGTACCTCGACGGCTCGC
ACCCCTTCCGCTCCTGGGACGGCGACATGGTCAGGGCGCGCGTGTACTTT
AGCGTCGACGGCCGGCTGGTGCACGTCTCCCCCGGCCTGGGGCCCCCGAT
CGCCCCTGATGGGTCCTCCGGAGACGGCTCCTCTTCTGCCGTTTTTCCGG
ACGAGAACCCCGCCGCCGCCGCCGCCGCCGCCCCTCGACGGGAGGAGGAG
GTGGAGCAAGTCACGGAATACGTTCCGTCGCCGCTGCCGGGGTCTGCGTC
GTTTGCGCGGCAACTGCGATCGGAGGACGCGCTAGCGGCCGGCGTGGACG
GAGGGGGGGATGACGAGGAGGACGTTTCGACGTCCGATTCCGAGGAGGTC
GCCCCGTGGGAAGCGGCGGCGGCTTCCGCCGTGGCGGGAGCGAGGGCGGG
GAGCGTAAACGGCGGCTGTTTCGGCGGGGTGATGGACGAGGACGTGGAAG
GCGGGGCGGTTGCGGAGGAGGGGGAGATAGGCGAGGAGCTAACGTCGCTT
CCGGTCGTGTCGTTGGCCCCCGGAGGATCGGCGGCGCTTGGGCTTGCCCT
GCCGAAGGACCGAGACCTGTTCCCCACGGTTACGATTCACAGCTCCAAAA
CGGAGCGTGGAAGGCGGGGCGGTTGCGGAGGAGGGGGAGATAGGCGAGGA
GCTAACGTCGCTTCCGGTCGTGTCGTTGGCCCCCGGAGGATCGGCGGCGC
TTGGGCTTGCCCTGCCGAAGGACCGAGACCTGTTCCCCACGGTTACGATT
CACAGCTCCAAAACGGAGATCATATGCCGCTTTTGTGCTCCAGACCTGCT
GAAGGTCTCAAGGGAAAGCATGGGCGCGCCTGCTGATGTTCCCATTTACG
CGCTGGACGGGAGCATAATCGACCTCCCGTAGATCATATGCCGCTTTTGT
GCTCCAGACCTGCTGAAGGTCTCAAGGGAAAGCATGGGCGCGCCTGCTGA
TGTTCCCATTTACGCGCTGGACGGGAGCATAATCGACCTCCCGTAG
back to top