mRNA_M-pyrifera_M_contig128205.5670.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A6B1AWW4_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWW4_9ACTN) HSP 1 Score: 139 bits (350), Expect = 1.240e-36 Identity = 79/148 (53.38%), Postives = 100/148 (67.57%), Query Frame = 1
Query: 7 TLDELPTDVRLVIAGPPGNDAATVDAALARHGDR-IVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTALAARAPVSPQTSARVIQHSWDDAAAQMIEIYTRV 447
+L LP DV LV+AGPPGN +T+ A+ GDR VRLP V D + AL GA L +PSRYEGF LPPLEAL+ GTP+VATAVGALPEL+GD+V L PG+DEAF+ + A++ V + SAR+ +W AA QM +IY +
Sbjct: 271 SLGSLPNDVALVVAGPPGNAESTLRASA---GDRRFVRLPVVDDRQKAALLRGATVLAFPSRYEGFGLPPLEALSVGTPVVATAVGALPELIGDVVSLAPPGNDEAFSDQLRAAISEPGTVPVELSARIKAMTWQTAAQQMADIYRSI 415
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: UPI001AA059E0 (glycosyltransferase family 4 protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA059E0) HSP 1 Score: 114 bits (284), Expect = 2.700e-27 Identity = 72/148 (48.65%), Postives = 88/148 (59.46%), Query Frame = 1
Query: 28 DVRLVIAGPPGNDAATVDAAL--ARHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAA---VVTALAARAPVSPQTSARVIQHSWDDAAAQMIEIYTRVAAA 456
+VRLVIAGP G +DAA+ A H RIVRL VS+ R AL GA L +PS YEGF LPPLEA+AAGTP+V T G +PE+VGD V PGDD+A A V+T + + AR SW D A Q+ +Y R+A A
Sbjct: 227 EVRLVIAGPDGWGTVALDAAIDQAAHRSRIVRLGWVSETQRAALLRGAAVLAYPSVYEGFGLPPLEAMAAGTPVVTTRTGGIPEVVGDAARCVEPGDDQALAHALEEVLTDEELADQLRLRGKARAELFSWQDTAEQLARLYHRIADA 374
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A3M2G0B1_ACTSX (Glycosyltransferase family 1 protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2G0B1_ACTSX) HSP 1 Score: 111 bits (277), Expect = 7.840e-26 Identity = 75/152 (49.34%), Postives = 96/152 (63.16%), Query Frame = 1
Query: 10 LDELPTDVRLVIAGPPGNDAATVDAALARHG--DRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDI-VDLVAPGDDEAFTAAVVTALAARAPVSP--QTSARVIQHSWDDAAAQMIEIYTRVA 450
LD LP +V LV+AGP G + A++AR G R+ RL + D DRV L A L +PSR EG+ LPPLEA+ G P+VATAVGALPELVGD V LV PGDD+AF AA+ A++ PV+P + A V + D A ++ + Y RVA
Sbjct: 320 LDHLPPEVGLVVAGPAGAGEGDLAASVARTGVAGRVTRLTGIGDRDRVDLLGAARVLAFPSRDEGYGLPPLEAVWLGRPVVATAVGALPELVGDRGVALVPPGDDDAFVAALAAAVSD--PVAPPDEAVAAVRRLRPDLVAGELADAYRRVA 469
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A2N5JWU8_9ACTN (Glycosyltransferase family 1 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JWU8_9ACTN) HSP 1 Score: 104 bits (260), Expect = 7.430e-24 Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 28 DVRLVIAGPPGNDAATVDAALAR--HGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTAL---AARAPVSPQTSARVIQHSWDDAAAQMIEIYTRVA 450
D+RLVIAGP G VDAA+ R HG R+ RL V+ R AL GA A +PS YEGF PPLEA+ AG P+VAT GAL E++GD LVA GD EA A+ L + RA + + A + SW+ A + E+Y R A
Sbjct: 222 DLRLVIAGPDGWGTEAVDAAIDRAVHGRRVARLGYVTAGQRAALLRGAAAFAFPSVYEGFGFPPLEAMVAGVPVVATTAGALREVLGDGALLVAAGDHEALAEALALVLDDESFRASLVGRGRAHAARFSWERCGAGLSELYRRAA 367
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A6I3EZ72_9ACTN (Glycosyltransferase n=2 Tax=root TaxID=1 RepID=A0A6I3EZ72_9ACTN) HSP 1 Score: 103 bits (258), Expect = 1.480e-23 Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 28 DVRLVIAGPPGNDAATVDAALA--RHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTALAARAPVSPQTSA---RVIQHSWDDAAAQMIEIYTR 444
D+RLVIAGP G A V A+A +H DRIVRL VSD DR AL AGA+ +PS YEGF LPPLEALA TP+VAT+ GALPE++G G+ E+ AA+ + L + + +A R+ + SWD + ++Y R
Sbjct: 225 DLRLVIAGPEGWGAEAVAEAVAAAQHSDRIVRLGWVSDDDRDALLAGADVFAYPSLYEGFGLPPLEALAHRTPVVATSTGALPEVLGAAAAWADVGNIESLAAAISSVLDNESVATDIVAAGLDRLARFSWDATVDSLADLYRR 368
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: UPI001C630866 (glycosyltransferase family 4 protein n=1 Tax=Iamia sp. SCSIO 61187 TaxID=2722752 RepID=UPI001C630866) HSP 1 Score: 103 bits (258), Expect = 1.600e-23 Identity = 69/160 (43.12%), Postives = 90/160 (56.25%), Query Frame = 1
Query: 1 IATLDELPTD---VRLVIAGPPG--NDAATVDAALARHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTALA---ARAPVSPQTSARVIQHSWDDAAAQMIEIYTRVAAA 456
+A D + D VRLV+AGP G DA ARH DRIVRL V D +R L GA + +PS YEGF L PLEA+AAG P+V+T GA+PE+VGD +LV GD +A A+ L+ RA + R + WD +++ +Y R AAA
Sbjct: 220 VAAFDAVADDDAEVRLVLAGPDGWGVDALAEAVNQARHRDRIVRLGWVDDDERAGLLRGATVVAYPSVYEGFGLVPLEAMAAGVPVVSTRAGAIPEVVGDAAELVDVGDVDALAEALARLLSDEGRRAELVAAGHLRRARFRWDTTVEEIVALYRRAAAA 379
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A2W6CMX1_9ACTN (Glycosyltransferase family 1 protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A2W6CMX1_9ACTN) HSP 1 Score: 103 bits (256), Expect = 3.510e-23 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 1
Query: 28 DVRLVIAGPPGNDAATVDAALAR--HGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTAL---AARAPVSPQTSARVIQHSWDDAAAQMIEIYTRVA 450
D+ LV+AGP G A +AA+A H +R++R+ V R L AGA +PSRYEGF PPLEA+AAG P+VAT GALPE+VGD +LV GD E A+ L AAR + + +ARV SW+ A + ++Y A
Sbjct: 240 DLCLVVAGPDGWGTAAFEAAVAAATHRERVIRVGYVDPATRDLLLAGAAVFAYPSRYEGFGFPPLEAMAAGVPVVATTAGALPEVVGDGAELVGVGDIEGLAGAIDRLLSDGAAREALVARGTARVRTFSWEACGAGLAQLYRDAA 385
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A7V8YMH1_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YMH1_9ACTN) HSP 1 Score: 102 bits (254), Expect = 5.720e-23 Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1
Query: 25 TDVRLVIAGPPG--NDAATVDAALARHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFT---AAVVTALAARAPVSPQTSARVIQHSWDDAAAQMIEIYTRVAA 453
+D+RLV+AGP G DA A ARHG RI R+ +S+ DR L AGA +PS YEGF PPLEA+AA P+VA GALPE++GD LV P D E AAV+ R + + RV + SWD A ++ +Y R+ A
Sbjct: 225 SDLRLVVAGPDGWDQDALLAACAAARHGSRIRRMSYLSETDRRDLLAGAAVFAYPSLYEGFGHPPLEAMAADIPVVAARAGALPEVLGDAAVLVDPRDHEQLAQGLAAVLDDADLRTKLLERGRDRVARFSWDRAGEELSRLYHRLRA 372
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A537ZDW8_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZDW8_9ACTN) HSP 1 Score: 102 bits (254), Expect = 6.130e-23 Identity = 65/145 (44.83%), Postives = 88/145 (60.69%), Query Frame = 1
Query: 28 DVRLVIAGPPGNDAATVDAALA--RHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTAL---AARAPVSPQTSARVIQHSWDDAAAQMIEIYTRV 447
++RLVIAGP G + T + A+A RHGDR+ L V+D DR L AG +PS YEGF PPLEA+ G PIVA+ GALPE++GD LV P D A A+ AL RA ++ + SARV + W AA++ ++Y ++
Sbjct: 230 ELRLVIAGPDGWERPTFERAVANTRHGDRVAWLGYVNDADRRDLLAGCRVFAYPSLYEGFGHPPLEAMQCGVPIVASNTGALPEVLGDAALLVDPLDVAALAEALQRALDDEELRAQLTARGSARVARFDWTTAASEFTDLYAQL 374
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Match: A0A8F4FXV1_9ACTN (Glycosyltransferase family 4 protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4FXV1_9ACTN) HSP 1 Score: 100 bits (248), Expect = 3.140e-22 Identity = 69/160 (43.12%), Postives = 91/160 (56.88%), Query Frame = 1
Query: 1 IATLDELPTD---VRLVIAGPPGNDAATVDAAL--ARHGDRIVRLPQVSDHDRVALTAGAEALLWPSRYEGFALPPLEALAAGTPIVATAVGALPELVGDIVDLVAPGDDEAFTAAVVTALAARAPVSP---QTSARVIQHSWDDAAAQMIEIYTRVAAA 456
+A D L D +RLV+AGP G + AA ARH RIVRL VSD R+AL GA + + S YEGF PLEA+ AGTP+VATAVGALPE++ D LV PGD +A + L A V+ + R+ ++WD ++++Y R A A
Sbjct: 193 VAAFDVLAADDPELRLVLAGPDGLGVEALTAARERARHRRRIVRLGWVSDDQRLALLRGAAVVAYASTYEGFGFVPLEAIGAGTPVVATAVGALPEVLADGGLLVPPGDVDALAEGLARVLGDDALVADLLARGQRRLDAYTWDATVGGLVDLYRRAADA 352 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128205.5670.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128205.5670.1 >prot_M-pyrifera_M_contig128205.5670.1 ID=prot_M-pyrifera_M_contig128205.5670.1|Name=mRNA_M-pyrifera_M_contig128205.5670.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp IATLDELPTDVRLVIAGPPGNDAATVDAALARHGDRIVRLPQVSDHDRVAback to top mRNA from alignment at M-pyrifera_M_contig128205:42..500- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128205.5670.1 ID=mRNA_M-pyrifera_M_contig128205.5670.1|Name=mRNA_M-pyrifera_M_contig128205.5670.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig128205:42..500- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128205:42..500- >mRNA_M-pyrifera_M_contig128205.5670.1 ID=mRNA_M-pyrifera_M_contig128205.5670.1|Name=mRNA_M-pyrifera_M_contig128205.5670.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig128205:42..500- (Macrocystis pyrifera P11B4 male)back to top |