mRNA_M-pyrifera_M_contig128183.5663.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig128183.5663.1
Unique NamemRNA_M-pyrifera_M_contig128183.5663.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7C3AAL2_9BACT (FGE-sulfatase domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3AAL2_9BACT)

HSP 1 Score: 110 bits (275), Expect = 3.540e-28
Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            NVYEW  DWY+AY GN +VTKDYGQV+RVLRGGS+ SGRF  R A+RH+DR+ A R DYGFRCA DV
Sbjct:  201 NVYEWVADWYEAYPGNTLVTKDYGQVYRVLRGGSYMSGRFHARCARRHFDRMDAQRADYGFRCAKDV 267          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7V2TP64_9BACT (PEGA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2TP64_9BACT)

HSP 1 Score: 109 bits (272), Expect = 1.460e-26
Identity = 46/68 (67.65%), Postives = 56/68 (82.35%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDVR 204
            N YEW  DWY+AY GN VV+KDYGQ++RVLRGGSF S +FD+R A RH+DR+ A R+DYGFRCA DV+
Sbjct:  392 NAYEWVMDWYEAYPGNTVVSKDYGQIYRVLRGGSFLSDQFDIRCAARHFDRMDAKRSDYGFRCAKDVQ 459          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7C1GHN0_9BACT (PEGA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1GHN0_9BACT)

HSP 1 Score: 108 bits (270), Expect = 3.290e-26
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDVR 204
            N YEWT DWY+AY GN  VTKDYGQ+FRVLRGGS+ S +FDVR A RH+DR+ A R DYGFRCA+  R
Sbjct:  413 NAYEWTADWYEAYPGNTDVTKDYGQIFRVLRGGSYLSEKFDVRCAARHFDRIDAKRADYGFRCAMTAR 480          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7C4Z019_9BACT (PEGA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C4Z019_9BACT)

HSP 1 Score: 104 bits (260), Expect = 7.550e-25
Identity = 43/67 (64.18%), Postives = 53/67 (79.10%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            NVYEWT DWYQ YEGN  + K+YGQ++RVLRGGS+ + +FD R A+RH+DR+ A R DYGFRC  DV
Sbjct:  392 NVYEWTADWYQRYEGNTSIKKEYGQIYRVLRGGSYMTDKFDCRCARRHFDRMDAKREDYGFRCVKDV 458          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A1V5YY90_9BACT (Serine/threonine-protein kinase pkn1 n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YY90_9BACT)

HSP 1 Score: 104 bits (259), Expect = 9.950e-25
Identity = 44/68 (64.71%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDVR 204
            N YEW  DWY+AY GN  VTKDYGQ+FRVLRGGS++  +F+ RSA RH+DRV + R DYG RCA+D R
Sbjct:  390 NAYEWVFDWYEAYPGNTDVTKDYGQIFRVLRGGSYKGDKFEARSAARHFDRVDSNRRDYGCRCAMDAR 457          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7V2Y5W5_9BACT (PEGA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y5W5_9BACT)

HSP 1 Score: 103 bits (257), Expect = 1.810e-24
Identity = 46/67 (68.66%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            N YEWT  WYQAY GN  VTKDYGQ FRVLRGGS++S RF VR A+RHYD + + + DYGFRCA DV
Sbjct:  384 NAYEWTASWYQAYPGNPDVTKDYGQQFRVLRGGSYKSDRFGVRCARRHYDHMESRQADYGFRCAKDV 450          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A1V5ZJ77_9BACT (Serine/threonine-protein kinase pkn1 n=2 Tax=unclassified Candidatus Hydrogenedentes TaxID=1046981 RepID=A0A1V5ZJ77_9BACT)

HSP 1 Score: 103 bits (257), Expect = 1.930e-24
Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDVR 204
            N YEW  DWY AY GN  VTKDYGQ+FR+LRGGSF + +F+ R++ RH+DR+ + R DYGFRCA+D R
Sbjct:  392 NAYEWVMDWYDAYPGNPDVTKDYGQIFRILRGGSFLTEKFEARTSARHFDRMDSGRRDYGFRCAMDAR 459          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7C3WR91_9BACT (PEGA domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3WR91_9BACT)

HSP 1 Score: 101 bits (252), Expect = 1.000e-23
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            N YEW  DWYQ YEGN+ + K+YGQ++RVLRGGSF + +FD R A+RH+DR+ A R DYGFRC  D+
Sbjct:  390 NAYEWVSDWYQRYEGNQYIRKEYGQIYRVLRGGSFMTEKFDARCARRHFDRMDANRADYGFRCVKDL 456          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A2A5EB07_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5EB07_9BACT)

HSP 1 Score: 100 bits (248), Expect = 4.440e-23
Identity = 41/67 (61.19%), Postives = 51/67 (76.12%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            NVYEWT DWY  Y GN  +T DYG ++RVLRGGS+ S  F+ RS+KRH+D++ A R DYGFRCA D+
Sbjct:  439 NVYEWTNDWYNPYPGNTEITIDYGNIYRVLRGGSYLSEPFEARSSKRHFDKLDATRKDYGFRCAKDI 505          
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Match: A0A7Y5FBI7_9BACT (SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FBI7_9BACT)

HSP 1 Score: 95.9 bits (237), Expect = 1.250e-21
Identity = 42/67 (62.69%), Postives = 48/67 (71.64%), Query Frame = 1
Query:    1 NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYDRVSAVRNDYGFRCALDV 201
            N YEWT  WYQ Y+GN+ + K+YGQVFRVLRGGSFR   FD R  +R YD  +  R DYGFRCA DV
Sbjct:  391 NAYEWTSSWYQRYKGNEDIVKEYGQVFRVLRGGSFRKDPFDARCVRRSYDLNTNRREDYGFRCAADV 457          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128183.5663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C3AAL2_9BACT3.540e-2871.64FGE-sulfatase domain-containing protein n=1 Tax=Ca... [more]
A0A7V2TP64_9BACT1.460e-2667.65PEGA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A7C1GHN0_9BACT3.290e-2669.12PEGA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A7C4Z019_9BACT7.550e-2564.18PEGA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A1V5YY90_9BACT9.950e-2564.71Serine/threonine-protein kinase pkn1 n=1 Tax=Candi... [more]
A0A7V2Y5W5_9BACT1.810e-2468.66PEGA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A1V5ZJ77_9BACT1.930e-2461.76Serine/threonine-protein kinase pkn1 n=2 Tax=uncla... [more]
A0A7C3WR91_9BACT1.000e-2361.19PEGA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A2A5EB07_9BACT4.440e-2361.19Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
A0A7Y5FBI7_9BACT1.250e-2162.69SUMF1/EgtB/PvdO family nonheme iron enzyme n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig128183contigM-pyrifera_M_contig128183:294..500 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score63.5
Seed ortholog evalue4.3e-08
Seed eggNOG ortholog243161.TC_0422
Preferred namegldK
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Together with the serine threonine kinase PknD, may play a role in the specific interactions with host proteins during intracellular growth
EggNOG OGs2JFPX@204428,COG0515@1,COG0515@2,COG1262@1,COG1262@2
COG Functional cat.KLT
Best tax levelChlamydiae
Best eggNOG OGNA|NA|NA
Exons1
Model size207
Cds size207
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815795.0691633-CDS-M-pyrifera_M_contig128183:293..5001622815795.0691633-CDS-M-pyrifera_M_contig128183:293..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig128183 294..500 -
1692277573.0702682-CDS-M-pyrifera_M_contig128183:293..5001692277573.0702682-CDS-M-pyrifera_M_contig128183:293..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig128183 294..500 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig128183.5663.1prot_M-pyrifera_M_contig128183.5663.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig128183 294..500 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig128183.5663.1

>prot_M-pyrifera_M_contig128183.5663.1 ID=prot_M-pyrifera_M_contig128183.5663.1|Name=mRNA_M-pyrifera_M_contig128183.5663.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=69bp
NVYEWTQDWYQAYEGNKVVTKDYGQVFRVLRGGSFRSGRFDVRSAKRHYD
RVSAVRNDYGFRCALDVR*
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mRNA from alignment at M-pyrifera_M_contig128183:294..500-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig128183.5663.1 ID=mRNA_M-pyrifera_M_contig128183.5663.1|Name=mRNA_M-pyrifera_M_contig128183.5663.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=207bp|location=Sequence derived from alignment at M-pyrifera_M_contig128183:294..500- (Macrocystis pyrifera P11B4 male)
AATGTATATGAATGGACCCAGGACTGGTATCAGGCCTATGAGGGCAATAA AGTGGTGACCAAAGATTACGGACAGGTATTTCGGGTGCTTCGGGGCGGTA GTTTCCGCTCGGGTCGCTTCGATGTACGCAGTGCCAAACGCCACTATGAC CGTGTATCTGCGGTACGCAATGACTATGGTTTCCGTTGTGCACTGGATGT GCGCTAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig128183:294..500-

>mRNA_M-pyrifera_M_contig128183.5663.1 ID=mRNA_M-pyrifera_M_contig128183.5663.1|Name=mRNA_M-pyrifera_M_contig128183.5663.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=414bp|location=Sequence derived from alignment at M-pyrifera_M_contig128183:294..500- (Macrocystis pyrifera P11B4 male)
AATGTATATGAATGGACCCAGGACTGGTATCAGGCCTATGAGGGCAATAA
AGTGGTGACCAAAGATTACGGACAGGTATTTCGGGTGCTTCGGGGCGGTA
GTTTCCGCTCGGGTCGCTTCGATGTACGCAGTGCCAAACGCCACTATGAC
CGTGTATCTGCGGTACGCAATGACTATGGTTTCCGTTGTGCACTGGATGT
GCGCTAAAATGTATATGAATGGACCCAGGACTGGTATCAGGCCTATGAGG
GCAATAAAGTGGTGACCAAAGATTACGGACAGGTATTTCGGGTGCTTCGG
GGCGGTAGTTTCCGCTCGGGTCGCTTCGATGTACGCAGTGCCAAACGCCA
CTATGACCGTGTATCTGCGGTACGCAATGACTATGGTTTCCGTTGTGCAC
TGGATGTGCGCTAA
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