mRNA_M-pyrifera_M_contig128133.5658.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: UPI001FE67B40 (acyl-CoA/acyl-ACP dehydrogenase n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI001FE67B40) HSP 1 Score: 289 bits (739), Expect = 8.140e-95 Identity = 140/167 (83.83%), Postives = 152/167 (91.02%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPR TPGLT+ RCNETLGCRYMNNGELVFEDMRLP DHLLVE AIG+LG+YHRPGKI+QAAKNLGVG+RC EVAS+YVQ YVQGGRILIKHQAVALR+A+MA +EAVRGMVERAA AVD NA +AD +CNMAKVFASE +MKVA HCVELHGGN
Sbjct: 184 VGMLQGTSSFLVPRGTPGLTIARCNETLGCRYMNNGELVFEDMRLPEDHLLVEGNAIGRLGVYHRPGKIIQAAKNLGVGVRCFEVASDYVQTYVQGGRILIKHQAVALRMAEMATLIEAVRGMVERAARAVDENAGDADTLCNMAKVFASEAIMKVAQHCVELHGGN 350
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A6L5FH42_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FH42_9HYPH) HSP 1 Score: 285 bits (728), Expect = 2.780e-92 Identity = 135/167 (80.84%), Postives = 153/167 (91.62%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPRDTPGLTV RCNET+GCR+MNNGELVFEDMR+PADHLLVEN A+GK G+Y RPGKI+QA+KNLGVGMR EVAS+YVQNYVQGGRILIKHQAVALR+ADMA +LEAVR ++ RA+ AVD N P+ADV+CNM KVFASEE++KVA HC+ELHGGN
Sbjct: 252 VGMLQGTSSFLVPRDTPGLTVARCNETMGCRFMNNGELVFEDMRVPADHLLVENDALGKAGVYFRPGKIIQASKNLGVGMRAYEVASDYVQNYVQGGRILIKHQAVALRLADMATRLEAVRALLARASEAVDANTPDADVLCNMVKVFASEEIVKVAQHCLELHGGN 418
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A537L0U4_9PROT (Acyl-CoA dehydrogenase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537L0U4_9PROT) HSP 1 Score: 273 bits (697), Expect = 5.780e-91 Identity = 132/167 (79.04%), Postives = 149/167 (89.22%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPRDTPGLTV R NET+GCR+MNNGELVFEDMR+PADHLLVEN A+G+ GIY RPGKI+QAAKNLGVG+R EV S+YVQNYVQGGRILIKHQAVALR+ADMA ++EAVR ++ RAA AVD NA +AD +CNM KVFASEE+MKVA H +ELHGGN
Sbjct: 3 VGMLQGTSSFLVPRDTPGLTVARWNETMGCRFMNNGELVFEDMRVPADHLLVENDALGQAGIYFRPGKIIQAAKNLGVGLRAFEVTSDYVQNYVQGGRILIKHQAVALRLADMATRIEAVRALLGRAAQAVDDNAADADTLCNMVKVFASEEIMKVAQHAMELHGGN 169
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A537RD29_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RD29_9PROT) HSP 1 Score: 270 bits (690), Expect = 1.230e-89 Identity = 126/167 (75.45%), Postives = 148/167 (88.62%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
+GMLQGTSSFLVPRDTPGLTV RCNET+GCR+MNNGELVFEDM +P DHLL EN A+GK G+Y RPGKI+QAAKNLGVG+ E A+EYVQNYVQGGR LIKHQAVALR+ADMA ++EAVR ++ERAA AVD +AP+A+ +CNM K+FASEE++KVA HC+ELHGGN
Sbjct: 22 LGMLQGTSSFLVPRDTPGLTVARCNETMGCRFMNNGELVFEDMPVPEDHLLAENDALGKAGVYFRPGKIIQAAKNLGVGVHAFEAAAEYVQNYVQGGRTLIKHQAVALRLADMATRIEAVRALLERAAQAVDDDAPDAETLCNMVKLFASEEILKVAQHCLELHGGN 188
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A6N7GVF6_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GVF6_9HYPH) HSP 1 Score: 271 bits (692), Expect = 1.450e-87 Identity = 128/166 (77.11%), Postives = 147/166 (88.55%), Query Frame = 1
Query: 4 GMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
GMLQGTSSFLVPRDTPGLT+ RCNETLGCR+MNNGELVFEDMR+P DHLL EN A+G+ G+Y +PGKI+QAAKNLGVG+R E+ S YVQNYVQGGRILIKHQAVALR+ADMA +LEA R ++ERAA AVD AP+AD +CNMAK+FASEE++KVA H VELHGGN
Sbjct: 195 GMLQGTSSFLVPRDTPGLTIARCNETLGCRFMNNGELVFEDMRVPEDHLLAENDALGRAGVYFQPGKIIQAAKNLGVGVRAFELTSNYVQNYVQGGRILIKHQAVALRLADMATRLEATRALLERAAAAVDAKAPDADALCNMAKLFASEEILKVATHAVELHGGN 360
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A1Q7BV37_9PROT (Uncharacterized protein n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BV37_9PROT) HSP 1 Score: 270 bits (689), Expect = 4.760e-87 Identity = 125/167 (74.85%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPRDTPGLTV RCNET+GCR+MNNGELVF DMR+P DHLL EN A+GK G+Y RPGKI+QAAKNLGVG+ E A+EY QNYVQGGR+LIKHQAVALR+A+MA ++EAVR ++ERAA AVD AP+A+ +CNM K+FASEE++KVA HC+ELHGGN
Sbjct: 200 VGMLQGTSSFLVPRDTPGLTVARCNETMGCRFMNNGELVFADMRVPEDHLLTENDALGKAGVYFRPGKIIQAAKNLGVGVHAFEAAAEYAQNYVQGGRVLIKHQAVALRLAEMATRIEAVRALLERAAQAVDDEAPDAETLCNMVKLFASEEILKVAQHCLELHGGN 366
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A4D7B2Q3_9HYPH (Uncharacterized protein n=1 Tax=Phreatobacter stygius TaxID=1940610 RepID=A0A4D7B2Q3_9HYPH) HSP 1 Score: 266 bits (679), Expect = 1.540e-85 Identity = 126/167 (75.45%), Postives = 148/167 (88.62%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPR+TPGLTV +CNETLGCR+MNNGE+VFED R+PADHLLVE++A+GK G+Y R GKI+QAAKNLGVG+ C E ++YVQNYVQGGRILIKHQAVALR+ADMA ++EAVR +VERAA AVD P+ D +CNMAKV+ASEE+MKVA H +ELHGGN
Sbjct: 199 VGMLQGTSSFLVPRNTPGLTVTKCNETLGCRFMNNGEIVFEDCRVPADHLLVESEALGKAGVYFRAGKIIQAAKNLGVGVACFERTADYVQNYVQGGRILIKHQAVALRLADMATRIEAVRSLVERAAKAVDEGHPDMDALCNMAKVYASEEIMKVAQHALELHGGN 365
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A447CNW9_9HYPH (Acyl-CoA dehydrogenase n=5 Tax=Rhodoplanes TaxID=29407 RepID=A0A447CNW9_9HYPH) HSP 1 Score: 266 bits (679), Expect = 1.590e-85 Identity = 128/167 (76.65%), Postives = 147/167 (88.02%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPRDTPGLTV RCNETLGCR+MNNGELVFED+ +P DHLLVEN A+G+ GIY RPGKI+QAAKNLGVGMR EV ++YVQ+YVQGG+ILIKHQAVALR+ADMA +LEAVR ++ RAA AVD P+AD +CNMAKV+ASEE+ KVA H +ELHGGN
Sbjct: 196 VGMLQGTSSFLVPRDTPGLTVARCNETLGCRFMNNGELVFEDLWVPDDHLLVENDALGRAGIYFRPGKIIQAAKNLGVGMRAFEVTADYVQSYVQGGQILIKHQAVALRLADMATRLEAVRALLGRAARAVDDKDPDADALCNMAKVYASEEIFKVAQHALELHGGN 362
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A0A1PS44_9BACT (Acyl-CoA dehydrogenase n=1 Tax=bacterium YEK0313 TaxID=1522316 RepID=A0A0A1PS44_9BACT) HSP 1 Score: 263 bits (673), Expect = 1.240e-84 Identity = 126/167 (75.45%), Postives = 146/167 (87.43%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPR TPGLTV +CNET+GCR+MNNGELVF+D R+PADHLLVEN A+GK G+Y R GKI+QAAKNLGVG+ C E ++YVQNYVQGGRILIKHQAVALR+ADMA ++ AVR +VERAA AVD P+ DV+CNMAKV+ASEE+MKVA H +ELHGGN
Sbjct: 199 VGMLQGTSSFLVPRGTPGLTVAKCNETVGCRFMNNGELVFDDCRVPADHLLVENDALGKAGVYFRAGKIIQAAKNLGVGVACFERTADYVQNYVQGGRILIKHQAVALRLADMATRITAVRTLVERAAQAVDEGHPDMDVLCNMAKVYASEEIMKVAQHALELHGGN 365
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Match: A0A345ZY76_9HYPH (Uncharacterized protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZY76_9HYPH) HSP 1 Score: 262 bits (670), Expect = 2.790e-84 Identity = 126/167 (75.45%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 VGMLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVENQAIGKLGIYHRPGKIVQAAKNLGVGMRCLEVASEYVQNYVQGGRILIKHQAVALRIADMAVKLEAVRGMVERAAHAVDTNAPNADVMCNMAKVFASEEVMKVAMHCVELHGGN 501
VGMLQGTSSFLVPRDT G TV RCNETLGCRYMNNGE+VFEDM +P +HLLVEN A+G GIY RPGKI+QAAKNLGVG+R E +EYVQNYVQGGRILIKHQAVALR+ADMA ++EAVR + RAA AVD +P A+ +CNMAK+FASEE+MKV H VELHGGN
Sbjct: 192 VGMLQGTSSFLVPRDTKGFTVTRCNETLGCRYMNNGEMVFEDMFVPDEHLLVENDALGSAGIYFRPGKIIQAAKNLGVGVRAFEATAEYVQNYVQGGRILIKHQAVALRLADMATRIEAVRALTTRAAQAVDDKSPEAETLCNMAKLFASEEIMKVVQHAVELHGGN 358 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128133.5658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128133.5658.1 >prot_M-pyrifera_M_contig128133.5658.1 ID=prot_M-pyrifera_M_contig128133.5658.1|Name=mRNA_M-pyrifera_M_contig128133.5658.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=165bp MLQGTSSFLVPRDTPGLTVVRCNETLGCRYMNNGELVFEDMRLPADHLLVback to top mRNA from alignment at M-pyrifera_M_contig128133:2..502+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128133.5658.1 ID=mRNA_M-pyrifera_M_contig128133.5658.1|Name=mRNA_M-pyrifera_M_contig128133.5658.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig128133:2..502+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128133:2..502+ >mRNA_M-pyrifera_M_contig128133.5658.1 ID=mRNA_M-pyrifera_M_contig128133.5658.1|Name=mRNA_M-pyrifera_M_contig128133.5658.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=990bp|location=Sequence derived from alignment at M-pyrifera_M_contig128133:2..502+ (Macrocystis pyrifera P11B4 male)back to top |