mRNA_M-pyrifera_M_contig128120.5653.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: A0A7S4IBI1_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IBI1_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 1.620e-24 Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 MPYDVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
MPYDVEHEIKLVQW+VAKVG KQADG+ CTFG++FYDEEAEQIFESLV S AA
Sbjct: 3 MPYDVEHEIKLVQWFVAKVGEKQADGSYICTFGELFYDEEAEQIFESLVGSLKAA 57
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: L8GMC3_ACACA (Costars domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMC3_ACACA) HSP 1 Score: 63.2 bits (152), Expect = 1.230e-11 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 1
Query: 7 YDVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
YDV+HE+KLVQ+++ ++G +GT T TFG+ F D++ EQIFESLV S AA
Sbjct: 4 YDVDHEVKLVQYHMKRLGKDAGNGTWTITFGEFFNDKDVEQIFESLVGSLKAA 56
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: A0A6J2P8H7_COTGO (Costars family protein ABRACL n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2P8H7_COTGO) HSP 1 Score: 51.6 bits (122), Expect = 2.920e-7 Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 10 DVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
+V+HE+KL+ + ++GTK ADG T TFG +F D++ IFE+LV + AA
Sbjct: 2 NVDHEVKLLVKEIQRLGTKDADGQTTVTFGVLFNDDQCANIFEALVGTLKAA 53
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: UPI001C41615A (costars family protein ABRACL n=2 Tax=Solea senegalensis TaxID=28829 RepID=UPI001C41615A) HSP 1 Score: 49.7 bits (117), Expect = 1.680e-6 Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 1
Query: 10 DVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
+V+HE+K++ + ++GTK ADG + TFG +F+D+ IFE+LV + AA
Sbjct: 2 NVDHEVKVLVEEIHRLGTKNADGQTSVTFGTLFHDDRCANIFEALVGTLRAA 53
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: A0A8B8AUX7_CRAVI (costars family protein ABRACL-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8AUX7_CRAVI) HSP 1 Score: 48.1 bits (113), Expect = 7.080e-6 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 10 DVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
+V+HE+KL+ + ++G+ ADG +T TFG +F D+ IFE+LV + AA
Sbjct: 2 NVQHEVKLLVEEMKRLGSPDADGKVTVTFGTLFSDDRCANIFEALVGTLRAA 53
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: A0A6I9PYI8_9TELE (Costars family protein ABRACL n=3 Tax=Notothenioidei TaxID=8205 RepID=A0A6I9PYI8_9TELE) HSP 1 Score: 47.4 bits (111), Expect = 1.360e-5 Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 10 DVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
+V+HE+K + + ++G+K ADG + TFG +F DE+ IFE+LV + AA
Sbjct: 2 NVDHEVKRLVEEIQRLGSKNADGQTSVTFGVLFNDEQCANIFEALVGTLKAA 53
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: A0A2K1J556_PHYPA (Costars domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J556_PHYPA) HSP 1 Score: 48.1 bits (113), Expect = 1.730e-5 Identity = 24/55 (43.64%), Postives = 35/55 (63.64%), Query Frame = 1
Query: 1 MPYDVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
M +V+ EI ++ + ++GTK ADG+IT FG +F DE IFE+LV + AA
Sbjct: 1 MTMNVDEEIGRLKTEIVRLGTKNADGSITVKFGTLFNDERCANIFEALVGTLRAA 55
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Match: UPI00189DDFFE (costars family protein ABRACL n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189DDFFE) HSP 1 Score: 45.8 bits (107), Expect = 5.620e-5 Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 10 DVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRSPPAA 165
+V+HE+ L++ + ++G++ ADG T TFG +F D+ IFE+LV + AA
Sbjct: 2 NVDHEVGLLKEEIKRLGSENADGKYTVTFGVLFNDDRCANIFEALVGTLRAA 53 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig128120.5653.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig128120.5653.1 >prot_M-pyrifera_M_contig128120.5653.1 ID=prot_M-pyrifera_M_contig128120.5653.1|Name=mRNA_M-pyrifera_M_contig128120.5653.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp MPYDVEHEIKLVQWYVAKVGTKQADGTITCTFGDIFYDEEAEQIFESLVRback to top mRNA from alignment at M-pyrifera_M_contig128120:219..383- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig128120.5653.1 ID=mRNA_M-pyrifera_M_contig128120.5653.1|Name=mRNA_M-pyrifera_M_contig128120.5653.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=165bp|location=Sequence derived from alignment at M-pyrifera_M_contig128120:219..383- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig128120:219..383- >mRNA_M-pyrifera_M_contig128120.5653.1 ID=mRNA_M-pyrifera_M_contig128120.5653.1|Name=mRNA_M-pyrifera_M_contig128120.5653.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig128120:219..383- (Macrocystis pyrifera P11B4 male)back to top |