mRNA_M-pyrifera_M_contig127772.5597.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A661BNT5_9GAMM (Autotransporter domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BNT5_9GAMM) HSP 1 Score: 103 bits (257), Expect = 5.000e-24 Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
Query: 1 RFVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT----TQWG 495
+FVLG A GY +D D+D +GGDL+S+ Y AY + Y +N+YID Y ND DQ R++ Y G+ + A + +S+ ++ V G N+ +W L P ++Y DI ID F E+M+ G+G IDD D Q L + LG + T WG
Sbjct: 11 QFVLGGALGYMKTDTDLDNDGGDLDSNGYIMTAYGTYYDEQNYYIDFSVTYGVNDFDQKRHMSYQFQNQGSA--------NQFAKADYDSDMLTLFVAGGYNFNYGSWMLGPRLSLEYIDINIDDFTEKMSDPNGSGAGWGTNIDDTDQQWLTLKLGGKISYAYSTSWG 171
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A4P7BUZ2_9GAMM (Autotransporter outer membrane beta-barrel domain-containing protein n=1 Tax=Nitrosococcus wardiae TaxID=1814290 RepID=A0A4P7BUZ2_9GAMM) HSP 1 Score: 105 bits (263), Expect = 1.010e-23 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 4 FVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGA----SATTQWG 495
F+LG AF Y +D D DR GG L+SD+YS Y + Y ++++D +A Y D+D TRN+ Y + G + ++ + SS E +FS +++AG ++ L+A T+SPY R +Y +++ID F+ER LG G+ + DQ +SL +G + +TQWG
Sbjct: 217 FILGLAFNYLRTDTDFDREGGQLDSDTYSGSIYGTFYATNSFHVDWVATYGGIDYDSTRNISYAVPG---------DVVNTQSTSSPEGNQFSAAISAGYDFSLNALTISPYVRGEYINLDIDSFSER----DILGWGV--RYSDQTIESLTTAVGTQIAYAVSTQWG 369
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: D5BXP8_NITHN (Outer membrane autotransporter barrel domain protein n=2 Tax=Nitrosococcus halophilus TaxID=133539 RepID=D5BXP8_NITHN) HSP 1 Score: 103 bits (256), Expect = 1.070e-22 Identity = 55/156 (35.26%), Postives = 96/156 (61.54%), Query Frame = 1
Query: 4 FVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLG 471
F+LG AF Y ++D D DR GG+L+SDSYS Y + Y ++++D +A Y E ++D RN+ Y + G + ++ + SS + ++FS +++AG ++ L+A T+SPY R +Y ++E++ FNE+ LG G+ + DQD +S+ ++G
Sbjct: 233 FILGLAFNYLNTDTDFDREGGELDSDSYSGSIYGTFYATNSFHLDWVATYGEINYDSIRNISYAVPG---------DVVNTQSTSSPDGDQFSAAISAGYDFSLNALTISPYVRGEYINLEVNSFNEQ----DPLGWGV--RYSDQDIESVTTVVG 373
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A176S2B8_9GAMM (Outer membrane autotransporter barrel domain protein (Fragment) n=1 Tax=Candidatus Thiomargarita nelsonii TaxID=1003181 RepID=A0A176S2B8_9GAMM) HSP 1 Score: 89.0 bits (219), Expect = 3.750e-18 Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 1
Query: 1 RFVLGFAFGYKDSDADIDR----NGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQID 435
+FVLG A GY +DI +GG +++D YS Y LY +N+Y++ + YT ND+D R V+ P + TI+ A ++T+S++ + S TAG +AWT PY R+DY D++IDG+ E A GL LQ++
Sbjct: 170 QFVLGVAAGYNKLGSDIVHTASVSGGSVDADGYSLSGY-GLYYLDNFYVNGVITYTSNDYDIERRVVILSNNP------SIPTINRTASANTDSDQIAFSATAGYELSREAWTFGPYARLDYLDVDIDGYTETGA------GGLNLQVN 305
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A2U0AJE8_9GAMM (Autotransporter domain-containing protein (Fragment) n=1 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2U0AJE8_9GAMM) HSP 1 Score: 87.8 bits (216), Expect = 2.070e-17 Identity = 46/169 (27.22%), Postives = 88/169 (52.07%), Query Frame = 1
Query: 1 RFVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT----TQWG 495
+F+LG A G+ D++A+++ + GDL++ S + + Y +N+++D A ND DQ R+++YT+ G +S + + + S+ V +G +++ W+ P ++Y ++DGF E ++ TA G G A ++D D + L + LG + WG
Sbjct: 127 QFILGGAIGFSDTEAELENDAGDLDTQGVSLSLFGTYYSPQNYFVDFSATVGANDFDQKRSIVYTLDGLAD--------VSQNLKADYDGDTISLFVGSGYDFYRGPWSFGPRADLEYIKSDVDGFTEEVSDPTADGGGWATRVDGTDQRWLTLNLGGKVSYTHSADWG 287
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A7Z0VL19_9GAMM (Esterase EstA n=2 Tax=Candidatus Thiodiazotropha endolucinida TaxID=1655433 RepID=A0A7Z0VL19_9GAMM) HSP 1 Score: 88.6 bits (218), Expect = 2.300e-17 Identity = 46/169 (27.22%), Postives = 91/169 (53.85%), Query Frame = 1
Query: 1 RFVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT----TQWG 495
+F+LG A G+ D++A+++ + G+L++ S + + Y +N+++D A +ND DQ R+++YT+GG +S + + + S+ + +G ++ AW+ P ++Y ++DGF E ++ TA G G A +++D D + L + LG + WG
Sbjct: 645 QFILGGAVGFIDTEAELENDAGELDTQGISLSLFGTYYSPQNYFVDFSATVGKNDFDQKRSIVYTLGGLAD--------VSQELKADYDGDTVSLFIGSGYDFNRGAWSFGPRADLEYIKSDVDGFTEEVSDPTADGGGWATRVEDTDQRWLTLNLGGKVSYTHSADWG 805
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: UPI001BBA425A (Autotransporter outer membrane beta-barrel domain-containing protein n=1 Tax=Methylomonas sp. TaxID=418 RepID=UPI001BBA425A) HSP 1 Score: 88.2 bits (217), Expect = 2.330e-17 Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 1
Query: 7 VLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT----TQWG 495
VLG AF Y S++ DRNGG L+S++Y+ Y + Y +N Y D +A ++ R++ Y++ T T++ A + ++SV G NY L W +PY +++Y +++DGF+E GSG + DQ +S+ LG + T WG
Sbjct: 215 VLGTAFTYMRSESSFDRNGGSLDSNTYTGAFYGTYYATDNLYFDGIASVGGVNYASARHIQYSV---------PTETVNTLAKGTPGGNQYSVGFGGGYNYALQQWLFNPYAKVNYLKLDVDGFSETG------GSGWGMSYSDQTVESVTTTLGTQVSYAMSTPWG 366
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: UPI0009E8B9DE (autotransporter outer membrane beta-barrel domain-containing protein n=1 Tax=Thiohalocapsa sp. ML1 TaxID=1431688 RepID=UPI0009E8B9DE) HSP 1 Score: 88.2 bits (217), Expect = 2.940e-17 Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 7 VLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT 483
V+GFA GY SD DID NGGDL++ ++S Y + Y +N Y++ A + +DQ RN+ Y+I LG A + + ++++ + AG + A + YGR++Y ++++DG+ ER A+ GL L I+DQ S +LGA T
Sbjct: 381 VVGFALGYGSSDVDIDANGGDLDATAWSATLYSTYYATDNLYLEGSASWGWGSYDQNRNIDYSI------LGGTRE-----AKADFDGNQYALMLGAGYDITRGANIVDFYGRLNYVNVDLDGYRERGAE------GLDLVIEDQTSTSFSSVLGAQYT 522
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A7V5R0M1_9GAMM (Autotransporter domain-containing protein n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A7V5R0M1_9GAMM) HSP 1 Score: 85.1 bits (209), Expect = 3.670e-16 Identity = 52/159 (32.70%), Postives = 80/159 (50.31%), Query Frame = 1
Query: 7 VLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGASAT 483
V+G A GY + D+ ID++ +L S S + Y S Y N+N+YIDA + DQ RN+ + + G I AV ST + ++SV+++AG N++ +AW ++P +Y IDGF E A G DQD +SL+ G +
Sbjct: 610 VIGLAVGYANFDSKIDKSA-ELNSTSLTLTGYGSFYVNDNFYIDARISLSRPKFDQKRNINFNLRGID---------IQRTAVGSTTANQYSVAMSAGYNFYRNAWNITPNASFNYVKTNIDGFEETGA------GGFNFTYSDQDLESLVWSAGVKVS 752
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Match: A0A2V6PST8_9BACT (Autotransporter domain-containing protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PST8_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 1.650e-15 Identity = 52/157 (33.12%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 7 VLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGYTENDHDQTRNVIYTIGGPGTGLGAATNTISNAAVSSTESEEFSVSVTAGRNYFLDAWTLSPYGRIDYADIEIDGFNERMAQTTALGSGLALQIDDQDFQSLMMMLGAS 477
VLG AF Y + AD GD ++ SY Y + Y +Y DA G+ N D TR ++Y L AA +++ A TE +++ + AG ++ T++PYGR++Y ++IDG+ ER A+ GL L + QD S LGA+
Sbjct: 419 VLGVAFNYSKTSADFHGALGDTDTRSYGGLLYGTYYRGA-FYADAHTGFNWNKFDVTRRIVYES------LSAAASSVDRTAKGDTEGPQYTAGLGAGYDFRAGPVTITPYGRVEYIHLDIDGYTERGAE------GLNLTVRKQDVDSFQSALGAT 562 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127772.5597.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127772.5597.1 >prot_M-pyrifera_M_contig127772.5597.1 ID=prot_M-pyrifera_M_contig127772.5597.1|Name=mRNA_M-pyrifera_M_contig127772.5597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=166bp RFVLGFAFGYKDSDADIDRNGGDLESDSYSYFAYWSLYPNENWYIDAMAGback to top mRNA from alignment at M-pyrifera_M_contig127772:5..502- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127772.5597.1 ID=mRNA_M-pyrifera_M_contig127772.5597.1|Name=mRNA_M-pyrifera_M_contig127772.5597.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=498bp|location=Sequence derived from alignment at M-pyrifera_M_contig127772:5..502- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127772:5..502- >mRNA_M-pyrifera_M_contig127772.5597.1 ID=mRNA_M-pyrifera_M_contig127772.5597.1|Name=mRNA_M-pyrifera_M_contig127772.5597.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=996bp|location=Sequence derived from alignment at M-pyrifera_M_contig127772:5..502- (Macrocystis pyrifera P11B4 male)back to top |