mRNA_M-pyrifera_M_contig127754.5591.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A6L8EI84_9GAMM (DUF1329 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EI84_9GAMM) HSP 1 Score: 171 bits (434), Expect = 1.820e-49 Identity = 78/115 (67.83%), Postives = 92/115 (80.00%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TWELRKVY + TPKD NHPLS+R+M IDAQT+T+P+ + +DRKGD WK+FSICQAYPD H P NKGSGVAID+CFM+ DVQAQHCTTGQFKG L + TVQ LRK+G+
Sbjct: 321 TWELRKVYELHGTPKDPNHPLSRRVMYIDAQTYTIPRQAEFDRKGDLWKSFSICQAYPDRHLPKNKGSGVAIDNCFMMYDVQAQHCTTGQFKGQLDPTMNPPQMFTVQNLRKSGR 435
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A0F2RCH5_9PROT (Uncharacterized protein n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RCH5_9PROT) HSP 1 Score: 155 bits (393), Expect = 2.020e-43 Identity = 70/115 (60.87%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRKVY +E+ P D NHP+SKR+ +DAQT+TLP++ +YDRKGD WKTF+I QA+PD H PINKGSGV+IDD F ++DVQA HCTTG F+G + + Q++ TVQ LR GK
Sbjct: 319 TWQLRKVYVLESDPVDDNHPVSKRVHYVDAQTYTLPRTLIYDRKGDLWKTFTIGQAHPDHHDPINKGSGVSIDDAFSMLDVQAGHCTTGHFRGRVDSKLNPQSKFTVQNLRATGK 433
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A5A9W2I7_9GAMM (DUF1329 domain-containing protein n=1 Tax=Nitrincola tapanii TaxID=1708751 RepID=A0A5A9W2I7_9GAMM) HSP 1 Score: 155 bits (391), Expect = 4.280e-43 Identity = 70/115 (60.87%), Postives = 91/115 (79.13%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRKVY VEA P D+NHP+S+R+ +DAQTFT+P++++YDR G+ WK + I QA+PD H PINKGSGVAIDD F +IDVQAQHCTTGQFKG++ ++M VQ LR +G+
Sbjct: 323 TWQLRKVYEVEAKPVDENHPVSRRVHYMDAQTFTIPRTNVYDRSGNLWKAWVIGQAHPDHHLPINKGSGVAIDDAFTMIDVQAQHCTTGQFKGIVDPSLTPPSKMNVQNLRASGR 437
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A081G3E3_9GAMM (Uncharacterized protein n=3 Tax=Marinobacterium TaxID=48075 RepID=A0A081G3E3_9GAMM) HSP 1 Score: 154 bits (390), Expect = 6.110e-43 Identity = 68/114 (59.65%), Postives = 91/114 (79.82%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAG 342
TW+LRKVY VE+ P+D+NHP+SKR +DAQTFT+P++ +YDRKGD WK + I QA+PD H P+NKG+GV+IDD F +ID+QAQHCTTGQFKG++ +R + TVQ +R +G
Sbjct: 324 TWQLRKVYEVESIPQDENHPISKRTHFMDAQTFTIPRTVVYDRKGDMWKNWIIGQAHPDHHLPVNKGTGVSIDDAFSMIDIQAQHCTTGQFKGIVDPERSPVDIFTVQNMRASG 437
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A366GYM1_9GAMM (Uncharacterized protein DUF1329 n=2 Tax=Marinobacter pelagius TaxID=379482 RepID=A0A366GYM1_9GAMM) HSP 1 Score: 154 bits (390), Expect = 6.570e-43 Identity = 72/114 (63.16%), Postives = 87/114 (76.32%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAG 342
TW+LRKVY VE+ P D++HPLSKR+ +DAQTFT+P++ YDRKG WKTF+I QA+PD H P NKGSGV+IDD F +IDVQA HCTTGQFKG + + N VQYLR AG
Sbjct: 328 TWQLRKVYEVESVPVDESHPLSKRVHFMDAQTFTIPRTVSYDRKGSLWKTFTIGQAHPDHHLPKNKGSGVSIDDSFSMIDVQASHCTTGQFKGQVDPELTPTNMFNVQYLRAAG 441
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A501PJU1_9PROT (DUF1329 domain-containing protein n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PJU1_9PROT) HSP 1 Score: 154 bits (389), Expect = 8.420e-43 Identity = 70/115 (60.87%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRKVY +E+ P D+NHP+SKR+ +DA+TFTLP++ +YDRKGD WKTF I QA+PD H P NKGSGV+IDD FM++DVQ +HCTTG FKG + + +N+ TVQ LR GK
Sbjct: 323 TWQLRKVYILESEPVDENHPISKRVHYVDAETFTLPRTVIYDRKGDLWKTFVIGQAHPDYHLPKNKGSGVSIDDSFMMLDVQGEHCTTGHFKGQVDPKLNPRNKFTVQNLRVTGK 437
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: J9DET6_9PROT (Uncharacterized protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=J9DET6_9PROT) HSP 1 Score: 154 bits (388), Expect = 1.100e-42 Identity = 70/115 (60.87%), Postives = 88/115 (76.52%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRK Y +E+ P D+NHP+SKR+ +DAQTFT P++ +YDRKGD WKTF I QA+PD H INKGSGV++DD F +IDVQA HCTTGQFKG + + Q++ TVQ LR GK
Sbjct: 319 TWQLRKAYVLESQPVDENHPISKRVHYVDAQTFTKPRTLIYDRKGDLWKTFLIGQAHPDNHDDINKGSGVSVDDSFSMIDVQADHCTTGQFKGQVDPSLNPQSKFTVQNLRATGK 433
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: UPI0014202EC1 (DUF1329 domain-containing protein n=1 Tax=Pseudomaricurvus alkylphenolicus TaxID=1306991 RepID=UPI0014202EC1) HSP 1 Score: 154 bits (388), Expect = 1.340e-42 Identity = 69/115 (60.00%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRKVY +EATP DKNHP+SKR +DAQT+T+P++ YDRKGD WKTF+I QA+PD H NKGSGV+IDD F ++D+QA HCTTGQFKG L + + + + +VQ LR +G+
Sbjct: 330 TWQLRKVYELEATPVDKNHPISKRTHFVDAQTYTIPRTISYDRKGDMWKTFTIGQAHPDHHLEKNKGSGVSIDDSFSMVDIQASHCTTGQFKGQLDPEMNPRTKFSVQNLRASGR 444
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: A0A5P1R845_9GAMM (DUF1329 domain-containing protein n=1 Tax=Neptunomonas concharum TaxID=1031538 RepID=A0A5P1R845_9GAMM) HSP 1 Score: 153 bits (386), Expect = 2.240e-42 Identity = 70/115 (60.87%), Postives = 90/115 (78.26%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
TW+LRKVY VEA P D NHP+SKRI +DAQTFT+P++S+YDRKGD WK ++I QA+PD H P NKGSGV+IDD F +IDVQA HCTTGQFKG + + ++ +VQ +R +G+
Sbjct: 321 TWQLRKVYEVEAEPVDPNHPISKRIHYMDAQTFTIPRTSVYDRKGDLWKIWTIGQAHPDYHLPKNKGSGVSIDDAFTMIDVQANHCTTGQFKGQVDPELSPPSKFSVQNMRSSGR 435
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Match: UPI001C989C91 (outer membrane lipoprotein-sorting protein n=1 Tax=Marinobacterium sp. CAU 1594 TaxID=2862496 RepID=UPI001C989C91) HSP 1 Score: 153 bits (386), Expect = 2.290e-42 Identity = 68/115 (59.13%), Postives = 89/115 (77.39%), Query Frame = 1
Query: 1 TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTFSICQAYPDEHHPINKGSGVAIDDCFMIIDVQAQHCTTGQFKGLLHKDRDAQNRMTVQYLRKAGK 345
+W+LRKVY VEA P D NHP+SKR+ +DAQTFT+P+++ YDRKGD WK ++I QA+PD H P NKG+GV+IDD F +ID QAQHCTTGQFKGL+ ++ TVQ +R +G+
Sbjct: 322 SWQLRKVYEVEAVPVDPNHPISKRVHYMDAQTFTIPRTNTYDRKGDLWKAWTIGQAHPDHHLPANKGTGVSIDDSFSMIDTQAQHCTTGQFKGLVDPSLSPASKFTVQNMRASGR 436 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127754.5591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127754.5591.1 >prot_M-pyrifera_M_contig127754.5591.1 ID=prot_M-pyrifera_M_contig127754.5591.1|Name=mRNA_M-pyrifera_M_contig127754.5591.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=116bp TWELRKVYRVEATPKDKNHPLSKRIMNIDAQTFTLPQSSLYDRKGDFWKTback to top mRNA from alignment at M-pyrifera_M_contig127754:152..499- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127754.5591.1 ID=mRNA_M-pyrifera_M_contig127754.5591.1|Name=mRNA_M-pyrifera_M_contig127754.5591.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=348bp|location=Sequence derived from alignment at M-pyrifera_M_contig127754:152..499- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127754:152..499- >mRNA_M-pyrifera_M_contig127754.5591.1 ID=mRNA_M-pyrifera_M_contig127754.5591.1|Name=mRNA_M-pyrifera_M_contig127754.5591.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig127754:152..499- (Macrocystis pyrifera P11B4 male)back to top |