mRNA_M-pyrifera_M_contig12772.5583.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: D7G6B4_ECTSI (Rab11B, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6B4_ECTSI) HSP 1 Score: 399 bits (1026), Expect = 8.190e-140 Identity = 203/229 (88.65%), Postives = 213/229 (93.01%), Query Frame = 1
Query: 1 MASRPSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAEVTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
MASR SLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKR R DGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAE+VWLREL+NAADS SSLLD LV+VGNKVDLPNA+VTE EQE+SA RMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRG+QAAPP EA P+GIVLA KP ++ +CC
Sbjct: 1 MASRSSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRQRPDGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAEKVWLRELKNAADSNSSLLDSLVLVGNKVDLPNADVTEAEQESSAMRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGQQAAPPKEAAPKGIVLATPKPRAEEDKLECC 229
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A6G0WZ29_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZ29_9STRA) HSP 1 Score: 229 bits (585), Expect = 1.020e-72 Identity = 122/236 (51.69%), Postives = 166/236 (70.34%), Query Frame = 1
Query: 1 MASRPSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPN----AEVTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
M +YD L+K+VLVGD VGKTNLLA +T+ + D + + F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SRS+F+NA+ WL+ELRN+AD+ S+LL CL++VGNK+DL + V++ + +A+ S G+ S R SAKTGQ V +AFE+L++ VY + R A P EAP + L+ PP ++ N+CC
Sbjct: 1 MTCAADQQYDELYKVVLVGDPGVGKTNLLAYFTATEDEMAIDSSTNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRSTFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLAKDPSVSVVSQEDHDAAISEAGIMS-IRASAKTGQNVVEAFEKLVIEVYNQDKARN---AKPEEAPAPSVDLSAPAPP--KKKNNCC 230
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A485LBE8_9STRA (Aste57867_18857 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBE8_9STRA) HSP 1 Score: 226 bits (576), Expect = 5.940e-71 Identity = 121/228 (53.07%), Postives = 160/228 (70.18%), Query Frame = 1
Query: 25 YDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDL---PNAEVT-EGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
YD L+K+VLVGD VGKTNLLA +T+ D D + + F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+ WL+ELRN+AD+ S+LL CL++VGNK+DL P+ +V E + +A+ + G R SAKTGQ V +AFE+LI+ VY + R A P + P V S P ++ N+CC
Sbjct: 36 YDELYKVVLVGDPGVGKTNLLAYFTASDDEMAIDTSTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQSHWLKELRNSADTNSTLLSCLMLVGNKIDLALDPSVQVVAEEDHDAAVAAAGDVLGTRASAKTGQNVVEAFEKLIIEVYNQDKARN---AKPVDVPAAAAVDL-SAPAAQKKKNNCC 259
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A024UAY6_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024UAY6_9STRA) HSP 1 Score: 225 bits (573), Expect = 6.090e-71 Identity = 121/232 (52.16%), Postives = 160/232 (68.97%), Query Frame = 1
Query: 7 SRPSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAE--VTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
+ P +YD L+K+VLVGD VGKTNLLA +T+ D+ D + + F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+ WL+ELRN+AD+ S+LL CL++VGNK+DL A+ VT + E++ R SAKTGQ V +AFE+L++ VY + R A P E P L S P ++ N CC
Sbjct: 2 AAPDQQYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILDIRASAKTGQNVVEAFEKLVIEVYNQDKARN---ATPEEKP---SALDLSAPVEKKKKNSCC 227
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A067CD03_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD03_SAPPC) HSP 1 Score: 221 bits (564), Expect = 1.410e-69 Identity = 117/230 (50.87%), Postives = 156/230 (67.83%), Query Frame = 1
Query: 22 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFR----SDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPN----AEVTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
+YD L+K+VLVGD VGKTNLLA +T+ ++ D + + + S RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR++F+NA+ WL+ELRN+AD+ S+LL CL++VGNK+DL A V E+ +A R SAKTG+ V +AFE LI+ VY + R T AP +V +KPP ++ CC
Sbjct: 3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAVDASTNASKIFSSSVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRATFDNAQTHWLKELRNSADNNSTLLSCLMLVGNKIDLTEGINGAPVVAAEEHDAAMAAAGVHGVRASAKTGENVVQAFENLIIEVYNQDKARN------TPAPMEPVVDLTAKPPTKKKLPACC 226
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A1W0A2A3_9STRA (Rab11/RabA-family small GTPase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2A3_9STRA) HSP 1 Score: 218 bits (555), Expect = 3.360e-68 Identity = 119/230 (51.74%), Postives = 156/230 (67.83%), Query Frame = 1
Query: 22 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAE-----VTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
+YD L+K+VLVGD VGKTNLLA +T+ ++ D + F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDVTS+++FENA+ WL+ELRN+ADS S+LL CL++VGNK+DL A+ V + EA+A G+ + R SAKTG+ V AFE+LI+ VY + R A + P L D V + CC
Sbjct: 3 QYDELYKVVLVGDPGVGKTNLLAYFTATEEEMAMDAETNASKIFSAVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVTSKATFENAQCHWLKELRNSADSNSTLLSCLMLVGNKIDLVAADNASTIVPPEDHEAAAKAEGVMAM-RASAKTGENVVAAFEQLIIEVYNQDKNRTAPVATESATP-----LVDLNAKVPTKKKSCC 226
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A6S9ECQ7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ECQ7_HETAK) HSP 1 Score: 216 bits (550), Expect = 1.640e-67 Identity = 110/188 (58.51%), Postives = 142/188 (75.53%), Query Frame = 1
Query: 16 SLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAEVT-EGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYE 576
S +YD ++KIVLVGD VGKTNLL+C+TS K +G V SF +RK TVGVEFA+ +V HP+G RIKAQIWDTAGQERY AIT SHY+RA+GALLVYDVT+R SF+NA+ WL+EL+ +ADS SSLL+ ++ GNK+DL + V + EQ ++A+ +GL+ SA+ G VD AFE LIL+VY+
Sbjct: 10 SEQYDVMYKIVLVGDPGVGKTNLLSCFTSYRKDTSENGAVVSFNENRKPTVGVEFASWIVKHPNGDRIKAQIWDTAGQERYNAITKSHYRRAAGALLVYDVTNRKSFDNAKNWWLKELKESADSESSLLENTLLCGNKIDLVDKRVVHDAEQASAAAGLGLSMHQSTSAREGTNVDDAFETLILQVYD 197
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A024U937_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U937_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.230e-66 Identity = 108/191 (56.54%), Postives = 144/191 (75.39%), Query Frame = 1
Query: 7 SRPSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAE--VTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLIL 564
+ P +YD L+K+VLVGD VGKTNLLA +T+ D+ D + + F + RK T+GVEF T ++THP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SR+SF+NA+ WL+ELRN+AD+ S+LL CL++VGNK+DL A+ VT + E++ R SAKTGQ V +AFE+L++
Sbjct: 2 AAPDQQYDELYKVVLVGDPGVGKTNLLAYFTASDEDMAIDASTNASKIFSNVRKPTIGVEFGTKIITHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALIVYDVSSRTSFDNAQGHWLKELRNSADTNSTLLSCLMLVGNKIDLDPADTVVTPEDHESAVLAADGILDIRASAKTGQNVVEAFEKLVI 192
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A1V9YMI8_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMI8_9STRA) HSP 1 Score: 207 bits (527), Expect = 6.620e-64 Identity = 118/236 (50.00%), Postives = 154/236 (65.25%), Query Frame = 1
Query: 22 EYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPS---FR-------SDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPN----AEVTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYEVEHGRGEQAAPPTEAPPRGIVLADSKPPVSQENNDCC 687
+YD L+K GD VGKTNLLA +T+ ++ D + FR + RK T+GVEF T +VTHP+GKRIKAQIWDTAGQERYRAITSSHY+RA+GAL+VYDV+SRS+F+NA+ WL+ELRN+ADS S+LL CL++VGNK+DL N A + E +A+ R SAKTG+ V +AFE LI+ VY + R A P EA P ++ +K P ++ CC
Sbjct: 3 QYDELYK----GDPGVGKTNLLAYFTATEEEMAMDTDTNASKIFRRLQDEESAVRKPTIGVEFGTKIVTHPNGKRIKAQIWDTAGQERYRAITSSHYRRAAGALVVYDVSSRSTFDNAQSHWLKELRNSADSNSTLLSCLMLVGNKIDLANDMSGAAIVSSEDHIAAAAAEGVMGTRASAKTGENVVQAFENLIIEVYNQDKARSAPA--PVEAAP--VIDLGAKAPTKKKMPACC 230
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Match: A0A7S2XV75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV75_9STRA) HSP 1 Score: 206 bits (525), Expect = 7.280e-64 Identity = 106/189 (56.08%), Postives = 138/189 (73.02%), Query Frame = 1
Query: 13 PSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKR-PRADGTVPSFRSDRKTTVGVEFATMVVTHPDGKRIKAQIWDTAGQERYRAITSSHYKRASGALLVYDVTSRSSFENAERVWLRELRNAADSTSSLLDCLVIVGNKVDLPNAEVTEGEQEASASRMGLASSARVSAKTGQGVDKAFERLILRVYE 576
P+ +D FKIVLVGD VGKTNLLA YTS K P A ++ RK TVGVEFAT +V HP G RIKAQIWDTAGQERY +I SHY+RA+GA++VYDVTS+ +FENA+R WL++++++A S++++C+ +VGNK DL AEVTE E + + + +GL R SAKTG VD+AFE+LI VY+
Sbjct: 6 PAAAFDEQFKIVLVGDPGVGKTNLLAYYTSYRKGDPSA-----TYNEARKPTVGVEFATWIVRHPSGARIKAQIWDTAGQERYNSIVKSHYRRAAGAIVVYDVTSKKTFENAQRFWLQQIQDSASPDSNIMECITLVGNKTDL-QAEVTEAEHQTAMNSLGLPLEGRTSAKTGDNVDEAFEKLICLVYD 188 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12772.5583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12772.5583.1 >prot_M-pyrifera_M_contig12772.5583.1 ID=prot_M-pyrifera_M_contig12772.5583.1|Name=mRNA_M-pyrifera_M_contig12772.5583.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp MASRPSLEYDYLFKIVLVGDAAVGKTNLLACYTSQDKRPRADGTVPSFRSback to top mRNA from alignment at M-pyrifera_M_contig12772:5690..8757- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12772.5583.1 ID=mRNA_M-pyrifera_M_contig12772.5583.1|Name=mRNA_M-pyrifera_M_contig12772.5583.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3068bp|location=Sequence derived from alignment at M-pyrifera_M_contig12772:5690..8757- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12772:5690..8757- >mRNA_M-pyrifera_M_contig12772.5583.1 ID=mRNA_M-pyrifera_M_contig12772.5583.1|Name=mRNA_M-pyrifera_M_contig12772.5583.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1380bp|location=Sequence derived from alignment at M-pyrifera_M_contig12772:5690..8757- (Macrocystis pyrifera P11B4 male)back to top |