mRNA_M-pyrifera_M_contig127675.5568.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A2E7C6M9_9GAMM (50S ribosomal protein L25 n=6 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C6M9_9GAMM) HSP 1 Score: 298 bits (764), Expect = 3.160e-101 Identity = 151/159 (94.97%), Postives = 156/159 (98.11%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEE 477
PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADF+RVNE VAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLP+DIPEFIEVDMA+VKTG+IIHLSDI LP GVTSVAL+LGEDHDLAVASVVAPKGGSDAEE
Sbjct: 43 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFLRVNENVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPTDIPEFIEVDMADVKTGEIIHLSDITLPQGVTSVALALGEDHDLAVASVVAPKGGSDAEE 201
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A6C0U3Y7_9GAMM (50S ribosomal protein L25 n=1 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U3Y7_9GAMM) HSP 1 Score: 287 bits (734), Expect = 1.170e-96 Identity = 142/160 (88.75%), Postives = 155/160 (96.88%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEED 480
PLS+IRKDLEK+LENEAFFSHVL IN+ GKKEKAIL+DLQRHPARNSVTHADF+RV+EK AIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPE+IEVDMAE+KTGDI+HLS+I LP GVTSVALSLGEDHDLAVASVVAPKGG+DA+E+
Sbjct: 43 PLSLIRKDLEKALENEAFFSHVLAINVAGKKEKAILRDLQRHPARNSVTHADFLRVDEKSAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEYIEVDMAELKTGDIVHLSEITLPKGVTSVALSLGEDHDLAVASVVAPKGGTDADEE 202
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A5C9A453_9GAMM (50S ribosomal protein L25 n=2 Tax=Parahaliea TaxID=1857932 RepID=A0A5C9A453_9GAMM) HSP 1 Score: 267 bits (683), Expect = 7.060e-89 Identity = 126/163 (77.30%), Postives = 152/163 (93.25%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEEDSSE 489
PL+++RKDLEK+LENEAFFSHVL IN+ G EKAILKDLQRHPARN+V HADF+RV++KVAIKVHVPIHFLNEK+CHGVK++GGMIQHQ TDIEVLCLP+DIPE+IEVDM VK G+I+HLSD+ALP GV+SVAL+LGEDHDLA+ASV+ PKGGSDA+++++E
Sbjct: 43 PLTLVRKDLEKALENEAFFSHVLTINVGGSAEKAILKDLQRHPARNAVMHADFLRVDDKVAIKVHVPIHFLNEKSCHGVKIEGGMIQHQETDIEVLCLPTDIPEYIEVDMLNVKAGEIVHLSDVALPEGVSSVALALGEDHDLAIASVIPPKGGSDADDEAAE 205
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A5C9A9R2_9GAMM (50S ribosomal protein L25 n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A9R2_9GAMM) HSP 1 Score: 266 bits (681), Expect = 1.470e-88 Identity = 127/158 (80.38%), Postives = 148/158 (93.67%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAE 474
PL++IRKDLEK+LENEAFFSHVL IN+ G EKAILKDLQRHPARN+V HADF+R+++KVAIKVHVPIHFLNEK+CHGVK+QGGMIQHQ TDIEVLCLP+DIPE+IEVDM +VKTG+I+HLSD+ LP GV+SVAL+LGEDHDLA+ASV+APKGGSD E
Sbjct: 43 PLTLIRKDLEKALENEAFFSHVLSINVGGSIEKAILKDLQRHPARNAVMHADFLRIDDKVAIKVHVPIHFLNEKSCHGVKIQGGMIQHQETDIEVLCLPTDIPEYIEVDMIDVKTGEIVHLSDVKLPEGVSSVALALGEDHDLAIASVIAPKGGSDEE 200
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A2N5Y8E9_9GAMM (50S ribosomal protein L25 n=2 Tax=Halioglobus TaxID=1217416 RepID=A0A2N5Y8E9_9GAMM) HSP 1 Score: 258 bits (658), Expect = 4.810e-85 Identity = 124/158 (78.48%), Postives = 145/158 (91.77%), Query Frame = 1
Query: 4 LSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEE 477
L+IIRKDLEKSLENEAF+SHVL +N+ G +KAILKDLQRHPA++ V HADF+RV++KVAIKVHVPIHFLNE+ CHGVK++GGMIQHQATDIEV CLP DIPEFIEVDM E+KTG+I+HLSD+ LP+GVTSVAL+LGEDHDLA+ASVVAPKGG D +E
Sbjct: 44 LTIIRKDLEKSLENEAFYSHVLEVNVGGDVQKAILKDLQRHPAKDLVMHADFLRVDDKVAIKVHVPIHFLNEENCHGVKMEGGMIQHQATDIEVSCLPGDIPEFIEVDMLEIKTGEIVHLSDVTLPAGVTSVALALGEDHDLAIASVVAPKGGKDDDE 201
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A2N5Y3B1_9GAMM (50S ribosomal protein L25 n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y3B1_9GAMM) HSP 1 Score: 255 bits (651), Expect = 7.060e-84 Identity = 125/163 (76.69%), Postives = 146/163 (89.57%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEEDSSE 489
PLSIIRKDLEK+LE+EAF+SHVL IN+ G EKAILKDLQRHPARNSV HADF+RV++KVAIKVHVPIHFLNE TC GVK+QGG+IQHQ DIEVLCLP+DIPEFI VDMA ++TGDI+HLSD+ LP GV+SVALSLGEDHDLA+ASV+AP+GG +E+ +E
Sbjct: 43 PLSIIRKDLEKALESEAFYSHVLAINVAGSMEKAILKDLQRHPARNSVMHADFLRVDDKVAIKVHVPIHFLNEDTCKGVKLQGGIIQHQENDIEVLCLPNDIPEFIPVDMANLETGDILHLSDVTLPKGVSSVALSLGEDHDLAIASVIAPRGGDIEDEEEAE 205
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A4Z0LWT6_9GAMM (50S ribosomal protein L25 n=1 Tax=Haliea sp. SAOS-164 TaxID=2562682 RepID=A0A4Z0LWT6_9GAMM) HSP 1 Score: 254 bits (650), Expect = 7.180e-84 Identity = 122/158 (77.22%), Postives = 146/158 (92.41%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAE 474
PL++IRKDLEKSLENEAFFSHVL +N+ G+ +KAILKDLQRHPA++SV HADF+RV++KVAIKVHVPIHF NE+ CHGVK+QGG+IQH TDIEV CLP DIPEFIEVDM +VKTGDI+HLSDIALP+GV+SVAL+LGEDHDLA++SV+APKGG+ A+
Sbjct: 43 PLTLIRKDLEKSLENEAFFSHVLSVNVGGEVQKAILKDLQRHPAKDSVMHADFLRVSDKVAIKVHVPIHFTNEEACHGVKMQGGIIQHLETDIEVSCLPGDIPEFIEVDMLDVKTGDIVHLSDIALPAGVSSVALALGEDHDLAISSVIAPKGGAAAD 200
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: UPI0019D3C946 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D3C946) HSP 1 Score: 254 bits (650), Expect = 8.200e-84 Identity = 126/158 (79.75%), Postives = 146/158 (92.41%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVINING-KKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDA 471
PL++IRKDLEK+LENEAFFSHVL IN++G EKAILKDLQRHP+R++V HADF+RV++KVAIKVHVPIHFLNE+TC GVK+QGGMIQHQATDIEV CLP+ IPE+IEVDM +V+TG I+HLSDI LP GVTSVAL+LGEDHDLAVASV+APKGGSDA
Sbjct: 43 PLTLIRKDLEKALENEAFFSHVLTINVDGGTTEKAILKDLQRHPSRDAVMHADFLRVDDKVAIKVHVPIHFLNEETCKGVKIQGGMIQHQATDIEVQCLPTQIPEYIEVDMIDVETGGIVHLSDIKLPEGVTSVALALGEDHDLAVASVIAPKGGSDA 200
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: UPI001675D136 (50S ribosomal protein L25/general stress protein Ctc n=1 Tax=Halioglobus pacificus TaxID=930806 RepID=UPI001675D136) HSP 1 Score: 253 bits (646), Expect = 3.440e-83 Identity = 119/160 (74.38%), Postives = 147/160 (91.88%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEED 480
PL+++RKD EK+LENEAFFSHVL IN+ G EKAILKDLQRHPA++ V HADF+RV++KVAIKVHVPIHF+NE TC+GVK++GG++QHQ TDIEV CLP+DIPE+IEVDMAEVK+G+I+HL+DI LP GVTSVAL+LG+DHDLAVASV+ PKGGSDA+++
Sbjct: 43 PLTLVRKDFEKALENEAFFSHVLSINVGGTTEKAILKDLQRHPAKDVVMHADFLRVDDKVAIKVHVPIHFINEDTCYGVKMEGGIVQHQVTDIEVSCLPADIPEYIEVDMAEVKSGEIVHLTDITLPEGVTSVALALGDDHDLAVASVIPPKGGSDADDE 202
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Match: A0A4R5LPG7_9GAMM (50S ribosomal protein L25 n=1 Tax=Seongchinamella unica TaxID=2547392 RepID=A0A4R5LPG7_9GAMM) HSP 1 Score: 253 bits (645), Expect = 5.400e-83 Identity = 120/160 (75.00%), Postives = 144/160 (90.00%), Query Frame = 1
Query: 1 PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHADFMRVNEKVAIKVHVPIHFLNEKTCHGVKVQGGMIQHQATDIEVLCLPSDIPEFIEVDMAEVKTGDIIHLSDIALPSGVTSVALSLGEDHDLAVASVVAPKGGSDAEED 480
PL+++RKD+EKSLENEAF+SHVL IN+ G +KAILKDLQRHPA+N+V HADFMRV++KVAIKVHVPIHFLNE++CHGVK++GGMIQHQ TDIEV CLP DIPE+IEVDM V TG I+HLS+I LP GVTSVAL+LGEDHDLA+ASV+APKG +D +E+
Sbjct: 43 PLTLVRKDIEKSLENEAFYSHVLAINVGGDVQKAILKDLQRHPAKNTVMHADFMRVDDKVAIKVHVPIHFLNEESCHGVKMEGGMIQHQETDIEVSCLPGDIPEYIEVDMLNVVTGQIVHLSEIQLPEGVTSVALALGEDHDLAIASVIAPKGSADEDEE 202 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127675.5568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127675.5568.1 >prot_M-pyrifera_M_contig127675.5568.1 ID=prot_M-pyrifera_M_contig127675.5568.1|Name=mRNA_M-pyrifera_M_contig127675.5568.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp PLSIIRKDLEKSLENEAFFSHVLVININGKKEKAILKDLQRHPARNSVTHback to top mRNA from alignment at M-pyrifera_M_contig127675:3..503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127675.5568.1 ID=mRNA_M-pyrifera_M_contig127675.5568.1|Name=mRNA_M-pyrifera_M_contig127675.5568.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig127675:3..503- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127675:3..503- >mRNA_M-pyrifera_M_contig127675.5568.1 ID=mRNA_M-pyrifera_M_contig127675.5568.1|Name=mRNA_M-pyrifera_M_contig127675.5568.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig127675:3..503- (Macrocystis pyrifera P11B4 male)back to top |