mRNA_M-pyrifera_M_contig127592.5565.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig127592.5565.1
Unique NamemRNA_M-pyrifera_M_contig127592.5565.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A835Z6G5_9STRA (Heat shock protein 40 like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6G5_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 2.290e-6
Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAI---RDADPKVFQAAFNAIDTAEKAL 279
            + ++L  K  A   G P ++  RL    + +W+N NP+ VL L  +ATVE I++R +K+ T+VHPD+   +   RDA  +V QA    ID   + L
Sbjct:  226 EAKQLKDKYTAQDMGTPEQQINRLVG-PNFKWKNLNPYEVLMLDTDATVEDIKQRYRKLSTLVHPDKRLDMPLARDAFEEVKQAYQQLIDDGRRKL 320
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BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A6J2XW20_SITOR (dnaJ homolog subfamily C member 8 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2XW20_SITOR)

HSP 1 Score: 52.0 bits (123), Expect = 1.070e-5
Identity = 30/100 (30.00%), Postives = 57/100 (57.00%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            +++E++ + +   P + +E   R GA     + N NPF VL + P+ ++E+I+++ +++  +VHPD+       DP   Q AF A++ A K+L +   RK
Sbjct:   15 EVKEIEKRDSVLTPKQQIERLLRPGAT----YRNLNPFDVLQVEPDTSLEEIKKKYRRLSILVHPDK----NQDDPDRAQQAFEAVNKAWKSLENEETRK 106
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BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A482SK70_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SK70_9ARCH)

HSP 1 Score: 52.0 bits (123), Expect = 1.430e-5
Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 1 
Query:   43 GKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDA 222
            G   ++  RL A KH +W N NPF VL L  +ATVE I+ R KKM   VHPDR   I +A
Sbjct:  274 GSSAQQVDRLLA-KHYQWRNLNPFFVLQLDTDATVEDIKYRYKKMSLKVHPDRLRHIENA 332
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BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: UPI000C2530AC (dnaJ homolog subfamily C member 8 isoform X1 n=2 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C2530AC)

HSP 1 Score: 51.2 bits (121), Expect = 2.120e-5
Identity = 29/100 (29.00%), Postives = 56/100 (56.00%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            +++E++ + +   P + +E   R G+     + N NPF VL + P+ ++E+I+++ +++  +VHPD+       DP   Q AF A++ A K L +   RK
Sbjct:   20 EVKEIEKRDSVLTPKQQIERLLRPGST----YRNLNPFDVLQVEPDTSIEEIKKKYRRLSILVHPDK----NQDDPDRAQQAFEAVNKAWKTLENEETRK 111
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A8J9UMM3_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UMM3_BRAAE)

HSP 1 Score: 50.8 bits (120), Expect = 2.910e-5
Identity = 28/100 (28.00%), Postives = 58/100 (58.00%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            +++E++ + +   P + +E   R G+     + N NPF VL + P++++E+++++ +++  +VHPD+       DP+  Q AF A++ A K L +   RK
Sbjct:   18 EVKEIEKRDSVLTPVQQIERLLRPGST----YRNLNPFDVLQVEPDSSIEELKKKYRRLSILVHPDK----NQDDPERAQQAFEAVNKAWKTLENEDTRK 109
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: UPI0008759380 (dnaJ homolog subfamily C member 8-like isoform X2 n=1 Tax=Anoplophora glabripennis TaxID=217634 RepID=UPI0008759380)

HSP 1 Score: 50.4 bits (119), Expect = 3.720e-5
Identity = 29/100 (29.00%), Postives = 56/100 (56.00%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            +++E++ + +   P + +E   R G+     + N NPF VL + P+ ++E+I+++ +++  +VHPD+       DP   Q AF A++ A K L +   RK
Sbjct:   16 EVKEIEKRDSVLTPKQQIERLLRPGST----YRNLNPFDVLQVEPDTSLEEIKKKYRRLSILVHPDK----NQDDPDRAQQAFEAVNKAWKTLENEETRK 107
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A1B0AKG0_9MUSC (J domain-containing protein n=6 Tax=Glossina TaxID=7393 RepID=A0A1B0AKG0_9MUSC)

HSP 1 Score: 50.4 bits (119), Expect = 4.130e-5
Identity = 30/100 (30.00%), Postives = 57/100 (57.00%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            +++E++ + +   P + ++   R G+     + N NPF VL + PEAT+EQI++R +++  +VHPD+       + +  Q AF+ ++ A K L +   RK
Sbjct:   23 EVKEIEKRDSVLTPIQQIDRLLRPGST----YFNLNPFEVLQIEPEATIEQIKKRYRQLSILVHPDK----NQDNKERAQKAFDIVNRAWKTLENETARK 114
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A7S3NLG0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLG0_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 5.640e-5
Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 1 
Query:   82 KHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKR 297
            KHAE+ N NP+ VL L  +AT++ I+ R +++  + HPD+  A    D    + AF AI TA + L  P  R
Sbjct:   40 KHAEFRNLNPYLVLQLDTDATIDDIKMRYRRLSALCHPDKNLA----DGNRARCAFEAIKTAYQQLNDPKLR 107
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A6H5K2M9_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2M9_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 7.050e-5
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = 1 
Query:   43 GKPLEEATRLGAVKHA-EWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK 300
            G P E+  RL  ++H  +W+N N F  L L  +ATVE I++R +K+ T+VHPD+       D  + + AF  +  A + LL   +RK
Sbjct:  234 GTPKEQMDRL--LQHNYKWKNLNAFETLQLGQDATVEDIKQRYRKLSTLVHPDKRL-----DMPLARDAFEEVKKAYQLLLDEDRRK 313
[Close]
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Match: A0A834XN12_9HYME (J domain-containing protein n=2 Tax=Braconidae TaxID=7402 RepID=A0A834XN12_9HYME)

HSP 1 Score: 49.7 bits (117), Expect = 8.020e-5
Identity = 27/93 (29.03%), Postives = 53/93 (56.99%), Query Frame = 1 
Query:    1 QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVEQIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKAL 279
            +++E++ + +   P + ++   R G+     + N NPF VLH+ P+ TV++I+++ ++M  +VHPD+       D +  Q AF  ++ A K L
Sbjct:   26 EVKEIEKRDSVLTPKQQIDRLLRPGS----SYFNLNPFEVLHIEPDTTVDEIKKKYRRMSILVHPDK----NQDDAERAQQAFEIVNRAWKTL 110
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127592.5565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835Z6G5_9STRA2.290e-636.46Heat shock protein 40 like protein n=1 Tax=Tribone... [more]
A0A6J2XW20_SITOR1.070e-530.00dnaJ homolog subfamily C member 8 n=1 Tax=Sitophil... [more]
A0A482SK70_9ARCH1.430e-550.00Tetratricopeptide repeat protein n=1 Tax=archaeon ... [more]
UPI000C2530AC2.120e-529.00dnaJ homolog subfamily C member 8 isoform X1 n=2 T... [more]
A0A8J9UMM3_BRAAE2.910e-528.00Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
UPI00087593803.720e-529.00dnaJ homolog subfamily C member 8-like isoform X2 ... [more]
A0A1B0AKG0_9MUSC4.130e-530.00J domain-containing protein n=6 Tax=Glossina TaxID... [more]
A0A7S3NLG0_9STRA5.640e-538.89Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6H5K2M9_9PHAE7.050e-536.78J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A834XN12_9HYME8.020e-529.03J domain-containing protein n=2 Tax=Braconidae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127592contigM-pyrifera_M_contig127592:127..426 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score60.1
Seed ortholog evalue6.9e-07
Seed eggNOG ortholog7897.ENSLACP00000004790
Preferred nameDNAJC8
KEGG koko:K09528
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0030544,GO:0031072,GO:0031974,GO:0031981,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045171,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:1901360
EggNOG free text desc.Hsp70 protein binding
EggNOG OGs38PJP@33154,3BCRE@33208,3CST5@33213,485BR@7711,48YYY@7742,KOG1150@1,KOG1150@2759
COG Functional cat.O
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041,ko03110
Exons1
Model size300
Cds size300
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815790.4054267-CDS-M-pyrifera_M_contig127592:126..4261622815790.4054267-CDS-M-pyrifera_M_contig127592:126..426Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127592 127..426 +
1692277570.8471057-CDS-M-pyrifera_M_contig127592:126..4261692277570.8471057-CDS-M-pyrifera_M_contig127592:126..426Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig127592 127..426 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127592.5565.1prot_M-pyrifera_M_contig127592.5565.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig127592 127..426 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig127592.5565.1

>prot_M-pyrifera_M_contig127592.5565.1 ID=prot_M-pyrifera_M_contig127592.5565.1|Name=mRNA_M-pyrifera_M_contig127592.5565.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp
QLEELDAKVAAWVPGKPLEEATRLGAVKHAEWENANPFRVLHLPPEATVE
QIRERAKKMRTIVHPDRAAAIRDADPKVFQAAFNAIDTAEKALLHPLKRK
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mRNA from alignment at M-pyrifera_M_contig127592:127..426+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig127592.5565.1 ID=mRNA_M-pyrifera_M_contig127592.5565.1|Name=mRNA_M-pyrifera_M_contig127592.5565.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=300bp|location=Sequence derived from alignment at M-pyrifera_M_contig127592:127..426+ (Macrocystis pyrifera P11B4 male)
CAGTTGGAAGAGTTGGATGCAAAAGTTGCTGCATGGGTTCCTGGAAAGCC
ATTGGAAGAAGCAACACGGTTGGGTGCTGTAAAGCATGCGGAATGGGAAA
ATGCAAACCCATTCCGTGTCCTCCATCTCCCTCCTGAAGCTACCGTGGAG
CAAATTCGAGAGCGTGCAAAGAAAATGCGTACCATTGTCCATCCAGATCG
AGCAGCAGCAATTCGTGATGCAGATCCTAAAGTTTTTCAAGCTGCATTCA
ATGCCATTGATACTGCAGAAAAGGCTCTTCTTCATCCTCTAAAACGTAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig127592:127..426+

>mRNA_M-pyrifera_M_contig127592.5565.1 ID=mRNA_M-pyrifera_M_contig127592.5565.1|Name=mRNA_M-pyrifera_M_contig127592.5565.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig127592:127..426+ (Macrocystis pyrifera P11B4 male)
CAGTTGGAAGAGTTGGATGCAAAAGTTGCTGCATGGGTTCCTGGAAAGCC
ATTGGAAGAAGCAACACGGTTGGGTGCTGTAAAGCATGCGGAATGGGAAA
ATGCAAACCCATTCCGTGTCCTCCATCTCCCTCCTGAAGCTACCGTGGAG
CAAATTCGAGAGCGTGCAAAGAAAATGCGTACCATTGTCCATCCAGATCG
AGCAGCAGCAATTCGTGATGCAGATCCTAAAGTTTTTCAAGCTGCATTCA
ATGCCATTGATACTGCAGAAAAGGCTCTTCTTCATCCTCTAAAACGTAAG
CAGTTGGAAGAGTTGGATGCAAAAGTTGCTGCATGGGTTCCTGGAAAGCC
ATTGGAAGAAGCAACACGGTTGGGTGCTGTAAAGCATGCGGAATGGGAAA
ATGCAAACCCATTCCGTGTCCTCCATCTCCCTCCTGAAGCTACCGTGGAG
CAAATTCGAGAGCGTGCAAAGAAAATGCGTACCATTGTCCATCCAGATCG
AGCAGCAGCAATTCGTGATGCAGATCCTAAAGTTTTTCAAGCTGCATTCA
ATGCCATTGATACTGCAGAAAAGGCTCTTCTTCATCCTCTAAAACGTAAG
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