mRNA_M-pyrifera_M_contig127585.5564.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A2E7K982_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K982_9PLAN) HSP 1 Score: 142 bits (358), Expect = 3.580e-41 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 1
Query: 61 VLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
+LISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP
Sbjct: 1 MLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 67
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A517WUF5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUF5_9PLAN) HSP 1 Score: 119 bits (297), Expect = 1.240e-31 Identity = 53/87 (60.92%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 1 MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
MF L L + RR + L VL ++ +S VPLP S SP++KD STP+PCQNRPCGC+SA+QCWKSCCCF+N+EK+AW+KANRV P
Sbjct: 1 MFVWLGLKRNVSVRRLVSLLVLFALCASFVPLPTSSKSPLKKDQSTPYPCQNRPCGCRSAEQCWKSCCCFSNKEKVAWSKANRVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A518I7K2_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I7K2_9PLAN) HSP 1 Score: 113 bits (282), Expect = 2.400e-29 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 1
Query: 1 MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
MF L + ARR + L VL+S +S VPLP++ SPVEKD S +PCQNRPCGCQSA+ CWK CCCFTN+EK+AWA+AN V P
Sbjct: 1 MFVWLDNLRRFRARRLVSLLVLVSFCASFVPLPVASRSPVEKDQSAAYPCQNRPCGCQSAEACWKGCCCFTNQEKVAWAEANGVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A1P8W9L0_9PLAN (Uncharacterized protein n=2 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8W9L0_9PLAN) HSP 1 Score: 105 bits (263), Expect = 1.740e-26 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
MF+R + + RR IGL +L S+ +S VPLP+ + +EKD S PFPCQNRPCGC SA+QCWK CCCFTN +K+ WA+ N V P
Sbjct: 1 MFSRRVYSGRGIGRRLIGLALLASLCASFVPLPMPNAPSLEKDQSQPFPCQNRPCGCASAEQCWKQCCCFTNAQKVVWARENGVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A2E9VQS1_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E9VQS1_9PLAN) HSP 1 Score: 105 bits (262), Expect = 3.300e-26 Identity = 48/87 (55.17%), Postives = 62/87 (71.26%), Query Frame = 1
Query: 1 MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
M RLL R+ I L V++ + +S++PLP+++ EKD S PFPCQ+RPCGC SAKQCWKSCCCFT+ +K+AWAKAN V P
Sbjct: 1 MLPRLLKTIRITFRQAIALLVVLGMCASIIPLPMTVPVTAEKDRSIPFPCQDRPCGCASAKQCWKSCCCFTDSQKLAWAKANHVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A356A8A5_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A356A8A5_9PLAN) HSP 1 Score: 104 bits (260), Expect = 4.800e-26 Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 40 RRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
R+ I L V++ + +S+VPLP+++ +KD STPFPCQ+RPCGC SAKQCWKSCCCF + +K+AWAKAN V P
Sbjct: 9 RQAIALLVVLGMCASIVPLPMAVPVTADKDRSTPFPCQDRPCGCASAKQCWKSCCCFNDSQKLAWAKANHVTPP 82
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: UPI0011A0ADF1 (hypothetical protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=UPI0011A0ADF1) HSP 1 Score: 100 bits (249), Expect = 1.340e-25 Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1
Query: 1 MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
MF+ L K R I L +L +++ S P LS + ++KD + PFPCQNRPCGCQSA QCWK+CCCFTNREK+ WA+AN+V P
Sbjct: 1 MFSGLNNTKRRIVRSVICLVLLCALVFSFFPRSLSHPAGIQKDRTVPFPCQNRPCGCQSAGQCWKTCCCFTNREKLVWARANQVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A5C5XHB0_9PLAN (Uncharacterized protein n=2 Tax=Rubinisphaera italica TaxID=2527969 RepID=A0A5C5XHB0_9PLAN) HSP 1 Score: 103 bits (256), Expect = 2.130e-25 Identity = 44/74 (59.46%), Postives = 58/74 (78.38%), Query Frame = 1
Query: 40 RRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
R+ I L V++ + +S+VPLP+++ +KD STPFPCQ+RPCGC SAKQCWKSCCCF + +K+AWAKAN V P
Sbjct: 14 RQAIALLVVLGMCASIVPLPMAVPVISDKDRSTPFPCQDRPCGCASAKQCWKSCCCFNDSQKLAWAKANHVTPP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A142WZY3_9PLAN (Uncharacterized protein n=2 Tax=Planctomyces sp. SH-PL14 TaxID=1632864 RepID=A0A142WZY3_9PLAN) HSP 1 Score: 102 bits (254), Expect = 4.540e-25 Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 31 HHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
H +R I L VL + +LVPLP++ KD S PFPC +RPCGC SA QCWK CCCFTN EK+AWA+ANR+E P
Sbjct: 11 HLTQRLIALAVLAGVCLALVPLPIASPPVAGKDRSQPFPCMDRPCGCASADQCWKGCCCFTNSEKVAWAQANRIELP 87
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Match: A0A517VA91_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VA91_9PLAN) HSP 1 Score: 101 bits (251), Expect = 1.090e-24 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 1
Query: 40 RRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCQNRPCGCQSAKQCWKSCCCFTNREKIAWAKANRVEAP 261
RR IGL L+S+ +S +PLPL EKD S PFPCQ+RPCGC SA+QCWK CCCFTN EKI WA+ N + P
Sbjct: 14 RRLIGLAALVSVCASFMPLPLGSIPSREKDQSQPFPCQHRPCGCASAEQCWKQCCCFTNAEKIVWARDNGIIPP 87 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127585.5564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127585.5564.1 >prot_M-pyrifera_M_contig127585.5564.1 ID=prot_M-pyrifera_M_contig127585.5564.1|Name=mRNA_M-pyrifera_M_contig127585.5564.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=87bp MFTRLLLAKYHHARRWIGLFVLISIMSSLVPLPLSLSSPVEKDLSTPFPCback to top mRNA from alignment at M-pyrifera_M_contig127585:244..504+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127585.5564.1 ID=mRNA_M-pyrifera_M_contig127585.5564.1|Name=mRNA_M-pyrifera_M_contig127585.5564.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=261bp|location=Sequence derived from alignment at M-pyrifera_M_contig127585:244..504+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127585:244..504+ >mRNA_M-pyrifera_M_contig127585.5564.1 ID=mRNA_M-pyrifera_M_contig127585.5564.1|Name=mRNA_M-pyrifera_M_contig127585.5564.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig127585:244..504+ (Macrocystis pyrifera P11B4 male)back to top |