mRNA_M-pyrifera_M_contig127530.5550.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A518JM81_9BACT (Type II secretion system protein G n=6 Tax=Rosistilla TaxID=2795779 RepID=A0A518JM81_9BACT) HSP 1 Score: 239 bits (609), Expect = 7.030e-77 Identity = 117/121 (96.69%), Postives = 118/121 (97.52%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ 363
TNTFLVGETKYHLTEAGT STFYLSWASSIRLGTGGTMPHPVT+AGTYEPINSRIPTGSVP GSTDSRTGYSRLFGSFHPGGCNMLM DASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ
Sbjct: 206 TNTFLVGETKYHLTEAGTTSTFYLSWASSIRLGTGGTMPHPVTMAGTYEPINSRIPTGSVPMGSTDSRTGYSRLFGSFHPGGCNMLMGDASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ 326
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A5C6CIC2_9BACT (Uncharacterized protein n=2 Tax=Novipirellula galeiformis TaxID=2528004 RepID=A0A5C6CIC2_9BACT) HSP 1 Score: 213 bits (542), Expect = 1.480e-66 Identity = 103/119 (86.55%), Postives = 112/119 (94.12%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGL 357
TNTFLVGETKYHLTEAGT STFY SWASSIRLG+GGTMPHP TLAG+YE INSRIPTGS P GSTDSRTGYSRLFGS+HPGGC+MLM DASVNF+SE+MDL++YRQLGIRND+LPIGGL
Sbjct: 221 TNTFLVGETKYHLTEAGTNSTFYFSWASSIRLGSGGTMPHPATLAGSYESINSRIPTGSKPVGSTDSRTGYSRLFGSYHPGGCHMLMGDASVNFISESMDLDLYRQLGIRNDALPIGGL 339
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A4A1C2_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A4A1C2_9BACT) HSP 1 Score: 203 bits (517), Expect = 5.770e-63 Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTG-SVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGG 354
T TFLVGETKYHLTE+GT STFYLSWASSIRLGTG TMPHP TLAGTYEPINSRIPTG +VP DSRTGYSRLFGSFHPGGCNML+ADASV+F +ET++L+IYRQLGIRND LPIGG
Sbjct: 206 TKTFLVGETKYHLTESGTTSTFYLSWASSIRLGTGSTMPHPATLAGTYEPINSRIPTGGTVPASGADSRTGYSRLFGSFHPGGCNMLLADASVDFTAETINLDIYRQLGIRNDGLPIGG 324
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A7V8V6J9_9BACT (Uncharacterized protein n=2 Tax=Bremerella alba TaxID=980252 RepID=A0A7V8V6J9_9BACT) HSP 1 Score: 201 bits (511), Expect = 4.650e-62 Identity = 98/122 (80.33%), Postives = 110/122 (90.16%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSV-PKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ 363
T TFLVGE+KYHLTEAGT STFYLSW+SSIRLG+G TMPHPVT+AG YEPINSR TG + P+ +DSRTGYSRLFGSFHPGGCNMLMADASV+F+ ET+DL+IYRQLGIRNDS P+GGLPQ
Sbjct: 205 TKTFLVGESKYHLTEAGTTSTFYLSWSSSIRLGSGSTMPHPVTMAGAYEPINSRETTGGMQPQSGSDSRTGYSRLFGSFHPGGCNMLMADASVHFLPETIDLDIYRQLGIRNDSAPVGGLPQ 326
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A3ZRN0_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZRN0_9BACT) HSP 1 Score: 102 bits (253), Expect = 1.200e-23 Identity = 57/120 (47.50%), Postives = 71/120 (59.17%), Query Frame = 1
Query: 4 NTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ 363
NT +VGETKY LT G Y SWAS + G P LA + INS G D+ S+LFGS+HPGGC+ L+ D SV+F+SET+DLN+YRQLG +D LP GG P+
Sbjct: 205 NTLMVGETKYALTPEGRADGIYTSWASGTKTDAFGC---PWVLAAARDQINSNPKVGLT----HDTLNVMSKLFGSYHPGGCHFLLGDGSVHFMSETIDLNLYRQLGKLDDQLPTGGFPR 317
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A4V0I458_9BACT (Uncharacterized protein n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A4V0I458_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 1.060e-22 Identity = 57/120 (47.50%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGLP 360
TNTF+VGETKY T G ++ WAS L G +P +A INS G G+ D +SRLFGSFH GGCN +M D SV FVS+T+ L Y+QL +RND LP+GG P
Sbjct: 216 TNTFVVGETKYCTTPTGRSDGIHIGWASGTNLQEFG---NPYGVAAAVLQINSIGTNG----GNADQLGNFSRLFGSFHTGGCNFVMCDGSVRFVSDTIALATYQQLAVRNDGLPLGGAP 328
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A2S8GT17_9BACT (Prepilin-type cleavage/methylation domain-containing protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GT17_9BACT) HSP 1 Score: 98.2 bits (243), Expect = 3.450e-22 Identity = 56/117 (47.86%), Postives = 69/117 (58.97%), Query Frame = 1
Query: 4 NTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGG 354
NTF+VGE+KY LT G Y WAS + + G+ P LA + INS G D+ ++LFGS+HPGGC L+ D SV+F+ ETMDLNIYRQLG ND LP GG
Sbjct: 205 NTFMVGESKYCLTPTGRSDGIYTGWASGSKTDSYGS---PYVLAAARDQINSNPKVGL----KFDTLNIMTKLFGSYHPGGCFFLLGDGSVHFLPETMDLNIYRQLGKANDGLPAGG 314
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A6C7I8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia maris TaxID=122 RepID=A6C7I8_9PLAN) HSP 1 Score: 98.2 bits (243), Expect = 3.650e-22 Identity = 53/120 (44.17%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 4 NTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGLPQ 363
N LVGE+ Y+ T A T + Y+ WAS+ +G+GG+ H + L IN+ V + D R S FGSFH GGC+ L+AD SV+F+SE +D+ ++R LGIRND LP+GG Q
Sbjct: 207 NVLLVGESHYNTTTANTSNGSYVGWASTPNVGSGGSR-HAINLTAADGGINA----APVDPNTGDPRDYQSHHFGSFHTGGCHFLLADGSVHFISENVDITMFRSLGIRNDGLPVGGFTQ 321
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A518C2T7_9BACT (Uncharacterized protein n=2 Tax=Pirellulaceae TaxID=2691357 RepID=A0A518C2T7_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 6.730e-22 Identity = 56/119 (47.06%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKGSTDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGL 357
TN F+VGET+Y LT +G ++ WAS+ +L + GT P+ LA T E INS G D+ ++LFGS+HPGGC LM DASV+F+ ET+DL Y+ LG +D LP GGL
Sbjct: 203 TNIFMVGETRYCLTPSGRPDGYHSGWASATKLDSWGT---PLVLAATREQINSDPRDGI----KNDTLNIMTKLFGSYHPGGCMFLMGDASVHFIPETIDLATYQSLGKIDDGLPTGGL 314
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Match: A0A517T8G8_9PLAN (Uncharacterized protein n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517T8G8_9PLAN) HSP 1 Score: 96.3 bits (238), Expect = 2.470e-21 Identity = 53/119 (44.54%), Postives = 75/119 (63.03%), Query Frame = 1
Query: 4 NTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPINSRIPTGSVPKG-STDSRTGYSRLFGSFHPGGCNMLMADASVNFVSETMDLNIYRQLGIRNDSLPIGGL 357
N F+ GE+ Y+ T + T S+ Y SWAS+ T G P LA +N+ + +P S D R + LFGS+H GGC+M+MAD SV+F+SE +DL+ +R LGIR+D+LP+GGL
Sbjct: 222 NVFMAGESHYNTTRSNTRSSVYQSWASASNPSTKG--PLLGNLAAADGGVNAGVTDPQLPNSPSADPRDETAYLFGSYHVGGCHMMMADGSVHFISENIDLDTFRSLGIRDDALPVGGL 338 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127530.5550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127530.5550.1 >prot_M-pyrifera_M_contig127530.5550.1 ID=prot_M-pyrifera_M_contig127530.5550.1|Name=mRNA_M-pyrifera_M_contig127530.5550.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=122bp TNTFLVGETKYHLTEAGTVSTFYLSWASSIRLGTGGTMPHPVTLAGTYEPback to top mRNA from alignment at M-pyrifera_M_contig127530:3..368+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127530.5550.1 ID=mRNA_M-pyrifera_M_contig127530.5550.1|Name=mRNA_M-pyrifera_M_contig127530.5550.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=366bp|location=Sequence derived from alignment at M-pyrifera_M_contig127530:3..368+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127530:3..368+ >mRNA_M-pyrifera_M_contig127530.5550.1 ID=mRNA_M-pyrifera_M_contig127530.5550.1|Name=mRNA_M-pyrifera_M_contig127530.5550.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig127530:3..368+ (Macrocystis pyrifera P11B4 male)back to top |