mRNA_M-pyrifera_M_contig127507.5543.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A5A8C2X2_CAFRO (VPS10 domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C2X2_CAFRO) HSP 1 Score: 140 bits (353), Expect = 1.760e-35 Identity = 70/166 (42.17%), Postives = 98/166 (59.04%), Query Frame = 1
Query: 1 SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQRFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARVN 498
S AD + VF G+ +H ++D G TY AV + E++ HP +++LA+ +S +C A+G CYK LF S D G WK L YVVQF+WAH++ A P + I + K G QRFG WD V+ T+DLF RT+V+ GNRFLFT +L +A+V+
Sbjct: 148 SPADPNMVFFTGDNGMHLLTRDGGATYEAVGAAEKLGEIRLHPKNTDMMLAAGLSERCGDRAAAGACYKRLFASLDGGKNWKMLHDYVVQFEWAHSMRNNMAGDYPQETIIYSALVEKKGTQRFGQWDHRVDLFITEDLFVNSRTIVKRGNRFLFTDLFLAIAQVD 313
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A3P3YJW0_PLABS (VPS10 domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YJW0_PLABS) HSP 1 Score: 98.2 bits (243), Expect = 1.060e-20 Identity = 67/163 (41.10%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 22 VFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGY--CYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQRFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAK-YLFVARVNP 501
V LLG+ S D G T+ A+ + + T+VK HP A LLA +++A+C S + S C + + +S+D G TW + YV Q DWA E G P +FAT+ + K G QRF D V+FV TDD F++ LV GNRFL TA ++FVA V+P
Sbjct: 188 VVLLGDA-FSAVSSDGGSTFRALGLD-RVTDVKSHPEKASWLLALALTAQCRSGKTSDKHRCVQQVHVSEDLGQTWNAIADYVSQADWARGSFYEP--GSPRR-LFATVSNNKHGGQRFQASDPDVDFVMTDDYFQSYDVLVPGGNRFLTTAAAFMFVAAVDP 345
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A7S0YT18_9CRYP (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YT18_9CRYP) HSP 1 Score: 90.1 bits (222), Expect = 6.740e-18 Identity = 59/167 (35.33%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 1 SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQRFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARVNP 501
S A + G G+V W +KD G +Y+ S E+K HPT E +LAS + S Y +LF+S DFG +WK L V QF+WA A + + C+ K G F WD ++FV + D F + +V HGNRF Y FVA +NP
Sbjct: 115 SKAHADYAVMQGFGDVSWYTKDQGGSYARHSFGA-LVEMKLHPTNPEWVLASKYEGEFPSR------YLSLFVSVDFGKSWKKLASNVFQFEWADPAAAGRQEKTIYACVRKPDTQPKKG---FASWDPNIDFVVSHDFFGSSDVVVEHGNRFAVHPPYWFVAAMNP 271
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A077Y8W3_PLAYE (Sortilin, putative n=14 Tax=Plasmodium (Vinckeia) TaxID=418101 RepID=A0A077Y8W3_PLAYE) HSP 1 Score: 90.1 bits (222), Expect = 6.890e-18 Identity = 52/161 (32.30%), Postives = 90/161 (55.90%), Query Frame = 1
Query: 22 VFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAE-ASGYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQ-RFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARVN 498
V ++G H+ S D+G+T+ ++ + + H A+ L SS ++ C S + +SG C + L ++KD GA+++ + YVVQF+W + + D I+ T + G+Q RF W V+FV T++ + LV+HGN+FL + Y+FVA++N
Sbjct: 144 VLVIGAQNSHYISDDAGETFKLINYKNKINFWQFHNKKAQWALVSSWTSACFSTDNSSGECMQTLSLTKDLGASFQLIDIYVVQFNWGDVSSHSE------DTIYYTRHRNRNGHQQRFSGWSKDVDFVSTNNFGKDVEVLVKHGNKFLISNGYIFVAKLN 298
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: L1IK17_GUITC (VPS10 domain-containing protein (Fragment) n=4 Tax=Geminigeraceae TaxID=589343 RepID=L1IK17_GUITC) HSP 1 Score: 89.7 bits (221), Expect = 9.150e-18 Identity = 58/168 (34.52%), Postives = 82/168 (48.81%), Query Frame = 1
Query: 1 SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKV-GNQRFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARVNP 501
S AD + G GE +W +K+ G+TY+ + E+K HP+ AE +LAS Y +LF+S DFG +WK + V QF+WA + G IFA + + + F WD V+FV + D F+ +V HGNRF Y FVA +NP
Sbjct: 109 SHADPKYAVMKGYGESNWFTKNQGETYTKREFGIM-NEIKLHPSQAEWILASKYEGSFPDR------YLSLFLSVDFGQSWKKIVSRVFQFEWADP----KIKGFNEKTIFACVRKQDAPAKKNFAEWDPNVDFVISHDFFKNSDIVVPHGNRFALHRPYWFVAAMNP 265
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A4D8Y4X3_9ALVE (VPS10 domain-containing protein n=1 Tax=Perkinsus sp. BL_2016 TaxID=2494336 RepID=A0A4D8Y4X3_9ALVE) HSP 1 Score: 89.7 bits (221), Expect = 9.290e-18 Identity = 57/164 (34.76%), Postives = 88/164 (53.66%), Query Frame = 1
Query: 10 DTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEAS-GYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQ-RFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARV 495
D S V + N VH+ + DSG + + HPT + L SS + C S++ + G C L+++KD G T++ ++ YVVQF W ++ D I+ + F K G+Q R W+ GV+FV TDD + T+V+HGN+FL + Y+FVA+V
Sbjct: 53 DKSSVLISTNKLVHFMTDDSGVNWRILQHQDTIHTYIFHPTKGKWGLLSSWTDACDSSKRNTGVCKHMLYLTKDGGKTFQLVSSYVVQFSWGDKKQKQE------DRIYFSHFRSKSGHQQRLTLWNTGVDFVYTDDEGSSLHTIVQHGNKFLVSNGYIFVAKV 210
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A7S0Y4L3_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4L3_HEMAN) HSP 1 Score: 89.0 bits (219), Expect = 1.720e-17 Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = 1
Query: 1 SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQRFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVARVNP 501
S A+ + G +V W +KD G++Y S E+K HPT E +LAS + S Y +LF+S DFG +WK L V QF+WA A + + C+ D K + F WD ++FV + D F + + +V HGNRF Y FVA +NP
Sbjct: 106 SKANADYAVMQGFSDVSWYTKDQGESYHRHSFGA-LVEMKLHPTNPEWVLASKYEGEFPSR------YLSLFVSVDFGKSWKKLVSNVFQFEWADASAKGRHEKTIYACVRKA--DTKP-KKSFASWDPNIDFVVSHDFFGSSKVIVEHGNRFAVHPPYWFVAAMNP 262
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A1Y1ID90_KLENI (Vacuolar protein sorting 10 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1ID90_KLENI) HSP 1 Score: 82.4 bits (202), Expect = 3.270e-15 Identity = 58/173 (33.53%), Postives = 80/173 (46.24%), Query Frame = 1
Query: 19 RVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEV---KPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLT-------YYVVQFDWAHNLAPEQADGLPVDCIFATLFDRK--VGNQRFGF----WDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVA 489
++F G G HW + D G+ Y V + T + + HPT E LL ++ C A C +LF++KDFG TW LT V FDW + G + I A+++ V N G WD +FVR+DDLF T RT+VR G +F LF+A
Sbjct: 114 KIFFRGFGNFHWITSDFGRMYERVLGPIGQTGMVTWRQHPTETEWLLVIAVRWSCWGASGPP-CGNDLFVTKDFGRTWTNLTDAAQDRILTFVDFDWGWSKVGPHPPGYTKETIIASVYQNTADVRNHLAGRGSNGWDPFTDFVRSDDLFRTHRTVVRCGAQFEVANGLLFLA 285
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A0G4EEP0_VITBC (VPS10 domain-containing protein (Fragment) n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EEP0_VITBC) HSP 1 Score: 81.6 bits (200), Expect = 5.450e-15 Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 1
Query: 10 DTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAE-----ASG------YCYKNLFISKDFGATWKFLTYYVVQFDWAHNLAPEQADGLPVDCIFATLFDRKVGNQ-RFGFWDAGVNFVRTDDLFETQRTLVRHGNRFLFTAKYLFVAR 492
D + V ++G H+ S D+G+T+ + + + HPT L S+ S +CH+A A+G C L+++KD G + ++ YVVQF W +Q + I+ T K G Q ++G W V+F T+D + R L+ HGN+FL + Y FVA+
Sbjct: 118 DKNIVLVVGTKHSHFISNDAGRTWRRLKQRVPIHSWQFHPTQPHWALLSAWSDQCHTASEPAKTAAGGAATDKACNHMLYVTKDLGVQFHLVSSYVVQFSWGDVKHNQQ------NWIYFTHHRTKEGGQPKYGGWTKNVDFAVTEDFGRSHRVLMHHGNKFLVSNGYTFVAK 284
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Match: A0A7S0U7J2_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U7J2_HEMAN) HSP 1 Score: 75.1 bits (183), Expect = 1.460e-13 Identity = 36/93 (38.71%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 1 SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLASSMSAKCHSAEASGYCYKNLFISKDFGATWKFLTYYVVQFDW 279
S AD+ R+FL G G+ HW + D G+++ ++ VK H T A+ +LAS MS KC+S +G C ++L++S DFG +++ V Q+DW
Sbjct: 103 SDADSKRLFLQGGGKTHWVTYDRGESFLRRRAHMPLGGVKMHKTQADYMLASRMSEKCYSRAKAGECDQDLYVSYDFGTSFRRAVRRVSQYDW 195 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127507.5543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127507.5543.1 >prot_M-pyrifera_M_contig127507.5543.1 ID=prot_M-pyrifera_M_contig127507.5543.1|Name=mRNA_M-pyrifera_M_contig127507.5543.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp SSADTSRVFLLGNGEVHWASKDSGKTYSAVSPNLQFTEVKPHPTAAELLLback to top mRNA from alignment at M-pyrifera_M_contig127507:3..503- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127507.5543.1 ID=mRNA_M-pyrifera_M_contig127507.5543.1|Name=mRNA_M-pyrifera_M_contig127507.5543.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=501bp|location=Sequence derived from alignment at M-pyrifera_M_contig127507:3..503- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127507:3..503- >mRNA_M-pyrifera_M_contig127507.5543.1 ID=mRNA_M-pyrifera_M_contig127507.5543.1|Name=mRNA_M-pyrifera_M_contig127507.5543.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig127507:3..503- (Macrocystis pyrifera P11B4 male)back to top |