mRNA_M-pyrifera_M_contig12749.5538.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI) HSP 1 Score: 281 bits (720), Expect = 6.350e-92 Identity = 147/177 (83.05%), Postives = 154/177 (87.01%), Query Frame = 2
Query: 2 AFFFKDRLGLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNGLSLGKG----GGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKATLF 520
AFFFKDRLGLGHN++LVAMMG+WTEGLVGVSLIAIGLLGLKESLLDYE PAFE KSAGSAVVEG G +AIF NGVLHGFSWDGAPSLAPALALSSW SVLWFL+AYCSGTM AMSATTT+IGEGSVRVGKALDQPDIPRKLS+VSSFVAITIGAVWLAKA F
Sbjct: 61 AFFFKDRLGLGHNKRLVAMMGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAVFF 237
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA) HSP 1 Score: 206 bits (523), Expect = 3.130e-62 Identity = 111/175 (63.43%), Postives = 135/175 (77.14%), Query Frame = 2
Query: 2 AFFFKDRL--GLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKATLF 520
AFF KDR+ G G + ++ +GT+TE LVGVSLI IGL+GLKESLLD P + +A ++ + G + G GG +AIFLNG+LHGFSWDGAPSLAPALA ++W VLWFL+AYC GTMAAMSA TTIIGEGSVRVG+AL+QPDIP++LS+VSS +AI IGAVWL KA F
Sbjct: 56 AFFLKDRIQAGGGGGGRWISKLGTYTEVLVGVSLITIGLIGLKESLLDK---PHEDDAAAAASEISGEKSPAKRG-GGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKAAFF 226
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA) HSP 1 Score: 160 bits (404), Expect = 2.750e-44 Identity = 86/170 (50.59%), Postives = 117/170 (68.82%), Query Frame = 2
Query: 2 AFFFKDRLGLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKA 511
AFF K RL + L+ + +TE L+GVSLI IGLLGLKE+ ++ + ++ GS + + +G + K GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM +MS T++IGEG+V+VG+ALD+P+IP+KL+ SS VAI +G VW KA
Sbjct: 68 AFFLKGRLSTYSHNTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGS-IAGSAASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 235
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.440e-43 Identity = 89/171 (52.05%), Postives = 119/171 (69.59%), Query Frame = 2
Query: 2 AFFFKDRLGLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSG-NGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKA 511
AFF K RL + L+ + +TE L+GVSLI IGLLGLKE+ ++ + ++ GS + GSG +G + K GKA+FLNG+LHGFSWDG P+LAPALA SW V+ FL +Y GTM +MS T++IGEG+V+VG+ALD+P+IP+KL+ SS VAI +G VW KA
Sbjct: 192 AFFLKGRLSTYSHSTLIPKLSLYTEVLIGVSLIIIGLLGLKEAA-HFDVSAVMPLEAEGS--ITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 359
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA) HSP 1 Score: 144 bits (362), Expect = 2.970e-37 Identity = 85/173 (49.13%), Postives = 109/173 (63.01%), Query Frame = 2
Query: 2 AFFFKDRLGLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESL-LDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKATL 517
AF KD+L L + +++ + TWTE LVG+SLI IG LG+KES D + A A E S GS K+IF NG+LHG SWDG PSLAPALA ++W V+ FL AYC G + +MS T++IGEGSVRVG+ D P IP++LS+ SS +AI IG +W K L
Sbjct: 148 AFLVKDKLNL-NKSPMISNLSTWTEILVGLSLILIGFLGVKESRSFDSDKAAAKEKLEQESGKKTGSF----------KSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGKGIL 307
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A1Z5K0A1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0A1_FISSO) HSP 1 Score: 137 bits (345), Expect = 1.440e-35 Identity = 75/154 (48.70%), Postives = 105/154 (68.18%), Query Frame = 2
Query: 41 EKLVAMMGTWTEGLVGVSLIAIGLLGLKESL-LDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVW 499
EK++A TE VG+SLI IG++G++E+ + + ++S +AVV+ + S K +A+ NG+LHGFSWDGAPSLAPA+A+++W L FL AY GTM M+ TT+IGEG+ + G+ LD+PDIP+KLS VSS +AI IGAVW
Sbjct: 77 EKVLAGASHVTEIAVGLSLIVIGVMGIREAREWEQDLTTTMASQSLSAAVVDQVASKHSTQK---RAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAVGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAIVIGAVW 227
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A7S2KN96_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KN96_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.530e-35 Identity = 79/171 (46.20%), Postives = 107/171 (62.57%), Query Frame = 2
Query: 32 GHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNGLSLG-----------KGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKA 511
G N L+ G++ E +GVSLI IGLLG+KE+ ++E AP + +G +V G G S +A+ NG+LHGFSWDGAPSLAPA+A+++W L FL++Y GTMAAM+ TTIIGEG+ R LD+PD+PR LS+ SSF+A+ +G VW A
Sbjct: 2 GGNFDLLHHAGSFMELAIGVSLIVIGLLGIKEAK-EWE-AP----EDSGCDIVGEGGEGSSSSPQSLSAAAAPVSDAKRAVLFNGILHGFSWDGAPSLAPAVAIATWRGSLTFLLSYALGTMAAMALATTIIGEGTRRAAGKLDRPDLPRDLSVASSFLALVVGIVWCGLA 166
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A7S0FTD7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FTD7_9STRA) HSP 1 Score: 134 bits (338), Expect = 4.790e-35 Identity = 77/170 (45.29%), Postives = 113/170 (66.47%), Query Frame = 2
Query: 2 AFFFKDRLG-LGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESL---LDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVW 499
AF K+R+ +G + ++ E VG+SLI IG LG+KE+ + E A ++S +A + +G+ + + +A+ NGVLHGFSWDGAPSLAPA+A+++WT + FL++Y GTM+AM+ TTTIIGEG+ + G+ L +PDIP+KLS SS VA+ +GAVW
Sbjct: 24 AFALKNRVSKVGRLSTALDSASSFMELAVGLSLIFIGFLGMKEAREWSAEIEGAGESPSQSLSAAAAD---DGVKMAQK--RAVVFNGVLHGFSWDGAPSLAPAVAVATWTGNITFLLSYALGTMSAMAITTTIIGEGTRQAGEILHRPDIPQKLSYFSSIVALVVGAVW 188
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A7S4J5J5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5J5_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.500e-34 Identity = 78/171 (45.61%), Postives = 108/171 (63.16%), Query Frame = 2
Query: 2 AFFFKDRLG-LGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKA 511
AF K+R+ +G +V + E VG SL+ IGLLG+KE+ E E S S +G+ + + +A+ NGVLHGFSWDGAPSLAPA+A+++W + FL+AY GTMAAM+ TTT+IGEG+ + G+ L +PDIP+KLS VSS +AI +G W + A
Sbjct: 84 AFALKNRMSKMGAFSNIVHGASAFMEVAVGASLVFIGLLGIKEA---REWEAEIEGGSPQSLSAAAGEDGVKVAQK--RAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFWCSLA 249
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Match: A0A0G4EAE2_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EAE2_VITBC) HSP 1 Score: 138 bits (347), Expect = 6.510e-34 Identity = 84/177 (47.46%), Postives = 108/177 (61.02%), Query Frame = 2
Query: 2 AFFFKDRL------GLGHNEKLVAMMGTWTEGLVGVSLIAIGLLGLKESLL-DYEPAPAFETKSAGSAVVEGSGNGLSLGKGGGKAIFLNGVLHGFSWDGAPSLAPALALSSWTSVLWFLVAYCSGTMAAMSATTTIIGEGSVRVGKALDQPDIPRKLSIVSSFVAITIGAVWLAKA 511
AF KDR+ GL H L+ M TWTEGLVG+SLI IG G KE+ D E A A EG + LS G +F NG+LHGFS DGAP LAP+L+ + W +V FL++YC+GTM MSA + GEGS+R+ +A+D+PDIP++L+ +S A IG VW AKA
Sbjct: 268 AFVLKDRIFVMDAAGL-HGGALIERMETWTEGLVGLSLILIGFFGYKEARSWDAEELQAQLDARAKEEQKEGYRD-LSASLRRGLTLFFNGMLHGFSLDGAPGLAPSLSFTRWPAVFLFLLSYCTGTMLTMSACSAAAGEGSIRLTRAVDRPDIPKRLAFGASAFAAGIGIVWFAKA 442 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12749.5538.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12749.5538.1 >prot_M-pyrifera_M_contig12749.5538.1 ID=prot_M-pyrifera_M_contig12749.5538.1|Name=mRNA_M-pyrifera_M_contig12749.5538.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=156bp MMGTWTEGLVGVSLIAIGLLGLKESLLDYEPAPAFETKSAGSAVVEGSGNback to top mRNA from alignment at M-pyrifera_M_contig12749:6021..8318+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12749.5538.1 ID=mRNA_M-pyrifera_M_contig12749.5538.1|Name=mRNA_M-pyrifera_M_contig12749.5538.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2298bp|location=Sequence derived from alignment at M-pyrifera_M_contig12749:6021..8318+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12749:6021..8318+ >mRNA_M-pyrifera_M_contig12749.5538.1 ID=mRNA_M-pyrifera_M_contig12749.5538.1|Name=mRNA_M-pyrifera_M_contig12749.5538.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=936bp|location=Sequence derived from alignment at M-pyrifera_M_contig12749:6021..8318+ (Macrocystis pyrifera P11B4 male)back to top |