mRNA_M-pyrifera_M_contig12745.5526.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: D7FH82_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH82_ECTSI) HSP 1 Score: 130 bits (327), Expect = 5.010e-31 Identity = 58/128 (45.31%), Postives = 86/128 (67.19%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLVELMVMIQLDGACSCSPSRERATETQEKD 389
+L+FEK A+ D GA++ ++ C EV + +PG+CRF M SHV H++M+ LA++ RARG+YD++R AYNS P + PIPPFEEW+G+SS+CD + CR +EL+++ G + RA E D
Sbjct: 299 TLVFEKAAKGDFTGAVERIDRCVEVFEGFPGVCRFFMGSHVAHIMMTALAVIGDSRARGMYDRLRRAYNSTRLPDSTPIPPFEEWQGVSSFCDTFYCRTMELLIVGDEMGGIFAAGQNARADHQNEGD 426
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: A0A6H5JZG3_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG3_9PHAE) HSP 1 Score: 127 bits (318), Expect = 2.360e-29 Identity = 56/128 (43.75%), Postives = 84/128 (65.62%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLVELMVMIQLDGACSCSPSRERATETQEKD 389
+L+FEK A+ D GA++ ++ C EV + +PG+CRF M SHV H++++ LA + R RG+YD++R AYNS P + PIPPFEEW+G+SS+CD + CR +EL+++ G + RA E D
Sbjct: 379 TLVFEKAAKGDFSGAVERIDRCVEVFETFPGVCRFFMGSHVAHIMVTALAAIGNSRTRGMYDRLRRAYNSTRFPDSSPIPPFEEWQGVSSFCDTFYCRTMELLIVGDEMGGMFAAGQNARADHQNEGD 506
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: D8LFZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFZ9_ECTSI) HSP 1 Score: 103 bits (257), Expect = 9.040e-23 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 3
Query: 27 ARKDIGGALDHLENCGEVLQRYPGLCRFTM-WSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLVELMVMIQLDGACSCSP 353
A D GAL+ L C E+ +RYPG+CR + W H+ H ++ LA +D RAR +++++R AYN + +RP PP EEW+GLS++CD++ CRL E +V + GA S P
Sbjct: 120 ANGDADGALERLGYCVEIFERYPGVCRCMLQWCHLPHAAVAALAAIDDSRARELHNRLREAYNPSRPTASRPAPPSEEWQGLSAFCDDFQCRLFEAIVARKPLGAFSTPP 229
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: A0A6H5K8E7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8E7_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.960e-22 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTM-WSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRL 302
+L+F + A D G L+ + +C EVL+RYPG+CRF + W H+ H ++ LA MD RARG+Y+++R AYN + P PP E W+GLS++CD+++C L
Sbjct: 412 NLVFHRAANGDAVGMLEKIGHCVEVLERYPGVCRFMLGWCHLVHAALAALAAMDDCRARGLYNRLREAYNQFRPSASLPAPPLEAWQGLSAFCDHFHCML 511
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: D8LU16_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI) HSP 1 Score: 104 bits (260), Expect = 1.030e-21 Identity = 46/104 (44.23%), Postives = 66/104 (63.46%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLVELMV 317
+L+F K A+ D+ AL+ + C V +RYPGLC TM H H+++ LA + PRAR +YD +RA YNS G+ P+PP EEW G+ +CD+ CR +E +V
Sbjct: 300 TLVFVKGAKGDLNAALERVGRCVAVFERYPGLCSGTMGYHNAHIVLVCLAAISDPRARAMYDSLRATYNSFRPAGSLPVPPLEEWHGVDVFCDDCYCRAIEQLV 403
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: D8LU17_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU17_ECTSI) HSP 1 Score: 103 bits (257), Expect = 2.370e-21 Identity = 42/100 (42.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRF-TMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRL 302
+L F+K A+ D GG L+ L C EV + YPG+CR+ T+W H+ H ++ LA +D +RG+Y ++R YN + + P PP+EEW G+S++CD++ C L
Sbjct: 424 TLAFQKAAKGDAGGTLERLGRCVEVFELYPGVCRYMTLWCHLAHSVLGALAAIDDSSSRGLYTRLREVYNPSRPSSSLPAPPWEEWRGISAFCDDFQCSL 523
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: A0A6H5JYW4_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE) HSP 1 Score: 102 bits (255), Expect = 5.710e-21 Identity = 46/113 (40.71%), Postives = 72/113 (63.72%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLVELMVMIQLDGACS 344
+L+FEK A+ D L+ + C EV + YPG+CR T+ H H+++ LA + AR +YD++R +YNS +RP+PP+EEW+GL ++CD++ CR +E +V L A S
Sbjct: 424 TLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAMEGLVASDLMKAFS 536
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: A0A6H5JPH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH8_9PHAE) HSP 1 Score: 100 bits (249), Expect = 1.850e-20 Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 3
Query: 6 SLIFEKIARKDIGGALDHLENCGEVLQRYPGLCRFTM-WSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCRLV 305
+L+F++ A D GGAL+ L C EV +RYP + RF + W H+ H ++ LA +D RAR +Y+++R AYN +L + P+PP EEW+GL ++C ++ CR V
Sbjct: 121 NLVFKRAANGDAGGALERLGCCVEVFERYPCVYRFMLQWCHLAHAALAALAAIDDSRARELYNRLREAYNPSLPTASLPVPPKEEWQGLVTFCHDFQCRCV 221
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Match: A0A6H5K8L6_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L6_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 6.690e-6 Identity = 24/77 (31.17%), Postives = 43/77 (55.84%), Query Frame = 3
Query: 69 CGEVLQRYPGLCRFTMWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEGLSSYCDNYNCR 299
C ++ RYPGLCRF+ W H++H L++ LA ++ ++++R YNS +P + W + +C++ CR
Sbjct: 477 CAKIFVRYPGLCRFSRWQHLSHCLLTVLATLEDAEP---FEELRQVYNSVRTEDLVEVPEQQAWT-MVGFCNHIFCR 549 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12745.5526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12745.5526.1 >prot_M-pyrifera_M_contig12745.5526.1 ID=prot_M-pyrifera_M_contig12745.5526.1|Name=mRNA_M-pyrifera_M_contig12745.5526.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp MWSHVTHMLMSYLAIMDGPRARGIYDQMRAAYNSALRPGTRPIPPFEEWEback to top mRNA from alignment at M-pyrifera_M_contig12745:4472..6223+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12745.5526.1 ID=mRNA_M-pyrifera_M_contig12745.5526.1|Name=mRNA_M-pyrifera_M_contig12745.5526.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1752bp|location=Sequence derived from alignment at M-pyrifera_M_contig12745:4472..6223+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12745:4472..6223+ >mRNA_M-pyrifera_M_contig12745.5526.1 ID=mRNA_M-pyrifera_M_contig12745.5526.1|Name=mRNA_M-pyrifera_M_contig12745.5526.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig12745:4472..6223+ (Macrocystis pyrifera P11B4 male)back to top |