mRNA_M-pyrifera_M_contig127340.5506.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A2D6HHI4_9BACT (PDZ domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HHI4_9BACT) HSP 1 Score: 217 bits (553), Expect = 5.340e-64 Identity = 112/169 (66.27%), Postives = 129/169 (76.33%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAALVG-NVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLG GGTGSL+ +G IHNGADDNASG+A VLELAR PPA DV+FALWSGEELGLLGS HW A+PT A V N+NLDMVGRA G L ++GAG++ A W+ A + A L+ AVSLSG GIGGSDHQSFL EIPA+HLF+G+HTDYH+PSDD ERFEA
Sbjct: 397 HLGRGGTGSLAPDGLGLIHNGADDNASGSAVVLELARAFTRRSSPPAGDVIFALWSGEELGLLGSEHWCAQPTVPLAEVAANLNLDMVGRADDGALTILGAGTSPAFAGWMDAAGAAADLELAVSLSGQGIGGSDHQSFLRREIPALHLFSGLHTDYHRPSDDTERFEA 565
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A2D5W9Z2_9BACT (PDZ domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W9Z2_9BACT) HSP 1 Score: 209 bits (532), Expect = 2.450e-61 Identity = 110/169 (65.09%), Postives = 128/169 (75.74%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAALVG-NVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLGLGGTGSL + GEIHNGADDNASGTA V+E+ARLL A PPA DV+ ALWSGEELGLLGS +W PT VG N+NLDMVGRA G L+V+GAG++ AAWL A AGL+ +VSLSG G+GGSDHQ+F+ IPA+H F+G H DYH+PSDD ERFEA
Sbjct: 340 HLGLGGTGSLHGGAFGEIHNGADDNASGTAVVIEMARLLAA-GPPPAGDVICALWSGEELGLLGSEYWSEHPTVPLDRVGANINLDMVGRAGDGHLEVLGAGTSPPFAAWLEAAGPAAGLELSVSLSGQGMGGSDHQTFIKRAIPALHFFSGTHPDYHRPSDDTERFEA 507
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A521L159_9BACT (M28 family peptidase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521L159_9BACT) HSP 1 Score: 205 bits (521), Expect = 4.110e-60 Identity = 108/169 (63.91%), Postives = 129/169 (76.33%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAALV-GNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLG GG G+L ++IG++HNGADDNASGTA LE+ARLL + PA DV+ ALWSGEE GLLGS HWV PT A V NVNLDMVGRA +G+LQV+G G++ AAW+ EA AGL+ A SLSG G+GGSDHQSFL +IPA+HLF+G H+DYH+PSDD ER EA
Sbjct: 289 HLGTGGHGALDPTAIGQVHNGADDNASGTAVALEIARLL--RERKPARDVLIALWSGEEEGLLGSQHWVRAPTLPLADVRANVNLDMVGRAGNGKLQVLGVGTSAPFAAWMGEAGRAAGLEIAASLSGQGLGGSDHQSFLAQQIPALHLFSGTHSDYHRPSDDTERVEA 455
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A2D5B0Z0_9BACT (PDZ domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B0Z0_9BACT) HSP 1 Score: 204 bits (518), Expect = 2.080e-59 Identity = 104/169 (61.54%), Postives = 131/169 (77.51%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAALVG-NVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLG GG GSL+ G+IHNGADDNASGTA LE+AR+L+ +E PA DVV ALWSGEELGLLGS +W PT ++V N+NLDMVGRA+SG+L V+GAG+A+ AWL A +A L+ V+LSG G+GGSDHQ+F+ +IPA+HLFTG+H+DYH+PSDD+E F A
Sbjct: 329 HLGRGGPGSLAPQQQGQIHNGADDNASGTAVCLEIARILM--EEKPAGDVVIALWSGEELGLLGSEYWARAPTLDLSVVSMNINLDMVGRAASGKLSVLGAGTAEDFEAWLDAAGPKAALELQVNLSGQGVGGSDHQTFIKRDIPALHLFTGLHSDYHRPSDDVEGFHA 495
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A523PHU3_9BACT (M28 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PHU3_9BACT) HSP 1 Score: 202 bits (514), Expect = 6.630e-59 Identity = 109/169 (64.50%), Postives = 125/169 (73.96%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAA-LVGNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLG GGTGSL+ DDNASGTA VLE+AR L AE E P DV+FALWSGEELGLLGS HWV +PT A + GN+NLDMVGR G LQV+GAGS+ AAW+ E AGL+ AVSLSG G+GGSDHQ+FL EIPA+HLF+G+H DYHKPSDD E+FEA
Sbjct: 317 HLGRGGTGSLARXXXXXXXXXXDDNASGTAVVLEVARRL-AEGEAPQGDVLFALWSGEELGLLGSEHWVQQPTIPLADVAGNLNLDMVGRCGGGTLQVLGAGSSPAFAAWMEECGEHAGLELAVSLSGQGLGGSDHQTFLKREIPALHLFSGLHGDYHKPSDDAEKFEA 484
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A7Y5PVC6_9PLAN (M28 family peptidase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PVC6_9PLAN) HSP 1 Score: 202 bits (513), Expect = 8.520e-59 Identity = 105/169 (62.13%), Postives = 126/169 (74.56%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAA-LVGNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
HLG GG GSL S +IHNGADDNASGTA ++E+AR L A+ P CDV+FA WSGEELGLLGS HW +PT +V N+NLDMVGRA +G+L +GAGSA+ A WL E +GL VSLSG G+GGSDHQ+FL +IPAVH F+G+H DYHKP+DD+ERFEA
Sbjct: 308 HLGHGGEGSLDPQSGSQIHNGADDNASGTAVLIEVARQL-AKGPKPDCDVLFAAWSGEELGLLGSEHWAKDPTVALERVVANLNLDMVGRAGNGKLAALGAGSAEPFAPWLAELGPASGLTLEVSLSGQGVGGSDHQTFLKRKIPAVHFFSGLHPDYHKPTDDVERFEA 475
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A7Y4SW37_9BACT (M28 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4SW37_9BACT) HSP 1 Score: 190 bits (483), Expect = 1.450e-57 Identity = 101/152 (66.45%), Postives = 113/152 (74.34%), Query Frame = 1
Query: 52 IHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAALVG-NVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
IHNGADDNASGTA VLELAR L A P ACDVV ALWSGEELGLLGS HW P+ V N+NLDMVGR SG+L V+GAGSA + L A +RAGL +SLSG G+GGSDHQ+FL EIPA+H FTG+H DYH+PSDD ERFEA
Sbjct: 1 IHNGADDNASGTAVVLELARCLAASPRP-ACDVVLALWSGEELGLLGSEHWARNPSFALDTVAANLNLDMVGRGESGQLAVLGAGSAAEFSTLLAAAGARAGLALEISLSGQGVGGSDHQTFLKREIPALHFFTGLHADYHRPSDDSERFEA 151
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A7V0UIF6_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7V0UIF6_9BACT) HSP 1 Score: 149 bits (375), Expect = 1.020e-38 Identity = 80/169 (47.34%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGA-ALVGNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
H+GLG S + S G+IH+GADDNASGTA +LELARL+ D P V+F ++GEELGLLGS+H+V PT ++ G +N+DM+GR SS + V+G G++ AWL E+ GL + S GIGGSDH SF IP + F+G+H DYH+P+D ++ A
Sbjct: 374 HVGLGERNSAAPSEAGKIHHGADDNASGTAGILELARLMGDGDPKPRRSVLFVTFAGEELGLLGSSHFVNRPTVALNSIAGMINMDMIGRMSSNNISVIGVGTSPDFKAWLEESNQPVGLK--LGFSASGIGGSDHMSFNAKRIPVLFFFSGLHADYHRPTDTADKINA 540
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A3E0Q2T2_9BACT (M20/M25/M40 family metallo-hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q2T2_9BACT) HSP 1 Score: 146 bits (368), Expect = 9.980e-38 Identity = 85/166 (51.20%), Postives = 107/166 (64.46%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGAA-LVGNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSLSGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLER 495
H+G GG GSLS S EIHNGADDNASGTAA+LE+AR L A +E VVF ++GEE GLLGSAH+V EP + +N+DMVGR RL V G G++ AW+ AA GL ++ G G SDH SF +IP +HLFTG H+DYH+P+DD ++
Sbjct: 384 HVGRGGVGSLSPGST-EIHNGADDNASGTAALLEVARRLAAREEKLPRRVVFIAFTGEERGLLGSAHYVREPIFPLEDTIAMINMDMVGRLEEDRLTVFGTGTSPAWDAWIDAAAEEEGL--VLAKKPEGFGPSDHSSFYAKQIPVLHLFTGTHSDYHRPTDDWDK 546
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Match: A0A517Z4A3_9PLAN (Aminopeptidase YwaD n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517Z4A3_9PLAN) HSP 1 Score: 145 bits (366), Expect = 1.820e-37 Identity = 87/171 (50.88%), Postives = 109/171 (63.74%), Query Frame = 1
Query: 1 HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVVFALWSGEELGLLGSAHWVAEPTTGA-ALVGNVNLDMVGRASSGRLQVMGAGSAQGIAAWLPEAASRAGLDPAVSL--SGHGIGGSDHQSFLNHEIPAVHLFTGVHTDYHKPSDDLERFEA 504
H+GLGG GSL+ + E+HNGADDNASGTAA++ELAR L D+P VVF ++GEE GLLGSAH+V EP + V N+DMVGR +L V G+G++ AW E +R G D + L G G SDH SF EIP +HLFTG HTDYH+PSDD ++
Sbjct: 377 HVGLGGEGSLAPG-VKEVHNGADDNASGTAALIELARRLAERDQPLPRRVVFIAFTGEERGLLGSAHYVREPVFPLESTVAMFNMDMVGRLDEEKLTVFGSGTSS---AW-EEMLNRLGDDTGLELVRKPEGFGPSDHSSFYAKEIPVIHLFTGTHTDYHRPSDDWDKLNV 542 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127340.5506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig127340.5506.1 >prot_M-pyrifera_M_contig127340.5506.1 ID=prot_M-pyrifera_M_contig127340.5506.1|Name=mRNA_M-pyrifera_M_contig127340.5506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp HLGLGGTGSLSSSSIGEIHNGADDNASGTAAVLELARLLLAEDEPPACDVback to top mRNA from alignment at M-pyrifera_M_contig127340:2..505+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig127340.5506.1 ID=mRNA_M-pyrifera_M_contig127340.5506.1|Name=mRNA_M-pyrifera_M_contig127340.5506.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig127340:2..505+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig127340:2..505+ >mRNA_M-pyrifera_M_contig127340.5506.1 ID=mRNA_M-pyrifera_M_contig127340.5506.1|Name=mRNA_M-pyrifera_M_contig127340.5506.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig127340:2..505+ (Macrocystis pyrifera P11B4 male)back to top |