mRNA_M-pyrifera_M_contig1273.5496.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1273.5496.1 vs. uniprot
Match: D7FKQ0_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKQ0_ECTSI) HSP 1 Score: 360 bits (925), Expect = 1.720e-108 Identity = 229/402 (56.97%), Postives = 276/402 (68.66%), Query Frame = 1
Query: 1 IEAERTEVLRLTSALSTLRSTLRQEAKAATAREAGLKAVLASESEAXXXXXXXXXXXXSLIASAQGTEGGDGGVDHPPSVSVSGARFAIEAQRAKHEAARRRLQALEDENRTLRRSKADNXXXXXXXXXXXXXRDFLLREKDSLDERLQTLELRQQAFQQRKKAGHEDGTPD-VARDKLEEELRELQGQLSKEVDLRAKEAMDFAGRLKEKDEQAAEQLSKTLKQVMDGVKSQAGHIRGTVAQLEEERDRAIAARKDANRELEDVRCQLEGMQREKANATSDFDAQMQQSARERAALWLAVNKLDVLEAAKDAAIKDLQTEGEDKSRELKRLEAHNAGLTRELGQVDMSLMQALEDNGLTLDSVKLQNTPTSRRVSRRRLASHGRSSITNGHVAGNPPPHPQ 1203
+EAERTEVLRL L+ LR+ QEA A +EA LKA+LASE+EA SLI+SAQ E G D + S+ GAR AIEAQ AKHEA+RRR+QALED+NR L++ +A+ RDFLLR +ARD LE+++R L+ +L++E DLRAKEA +FA A EQL TLKQVM+GVKSQAGHIRGTV QLEEERDRAI+ ++ A +ELED++C+LE +++EK+ A SDFD QM+QSARERAALWLAVNKLDVLEAAKD+AIK+LQ EGEDK+R LK L+AHNAGLTRELGQVDMSLMQALEDNGLTLDSV+LQNTP SRR+ RRR +SH ITNG AG+PPP P+
Sbjct: 1886 VEAERTEVLRLAGELNDLRAAAEQEATAGREKEAALKAMLASETEASRAEQVEVEDLLSLISSAQDPESGGRTADDA-AASIPGARAAIEAQWAKHEASRRRVQALEDDNRALKQREAEAQANLDRLGLLEEERDFLLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALARDGLEDQVRGLKERLARETDLRAKEAKEFAXXXXXXXXXAEEQLGDTLKQVMEGVKSQAGHIRGTVTQLEEERDRAISGKQAAVKELEDIKCELEAVKKEKSEARSDFDEQMKQSARERAALWLAVNKLDVLEAAKDSAIKELQKEGEDKARALKVLQAHNAGLTRELGQVDMSLMQALEDNGLTLDSVRLQNTPMSRRLGRRRPSSHDPVGITNGRAAGSPPPEPE 2286
BLAST of mRNA_M-pyrifera_M_contig1273.5496.1 vs. uniprot
Match: A0A7S3Y771_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y771_HETAK) HSP 1 Score: 63.5 bits (153), Expect = 1.820e-8 Identity = 51/140 (36.43%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 541 ELRELQGQLSKEVDLRAKEAMDFAGRLKEKDEQAAEQLSKTLKQVMDGVKSQAGHIRGTVAQLEEERDRAIAARKDANRELEDVRCQLEGMQREKANATSDFDAQMQQSARERAALWLAVNKLDVLEAAKDAAIKDLQTE 960
E+R L+GQL E + R KE L+ +D + A++L L +V++GV+SQ+ +R VA+L+ RD+ + ELE R RE AALWL VNKLD L+AAKDAA+++LQ +
Sbjct: 12 EVRYLRGQLDLEREARRKETAKLDALLRARDAEHAKELQGALDEVLEGVRSQSTTVRHQVARLQ--RDKRVL-----RGELEAARAAGRRXXXXXXXXXXXXXXXXXXXXRELAALWLTVNKLDTLDAAKDAAMQELQAD 144 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1273.5496.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1273.5496.1 >prot_M-pyrifera_M_contig1273.5496.1 ID=prot_M-pyrifera_M_contig1273.5496.1|Name=mRNA_M-pyrifera_M_contig1273.5496.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=401bp IEAERTEVLRLTSALSTLRSTLRQEAKAATAREAGLKAVLASESEASRAEback to top mRNA from alignment at M-pyrifera_M_contig1273:2767..11544- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1273.5496.1 ID=mRNA_M-pyrifera_M_contig1273.5496.1|Name=mRNA_M-pyrifera_M_contig1273.5496.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8778bp|location=Sequence derived from alignment at M-pyrifera_M_contig1273:2767..11544- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1273:2767..11544- >mRNA_M-pyrifera_M_contig1273.5496.1 ID=mRNA_M-pyrifera_M_contig1273.5496.1|Name=mRNA_M-pyrifera_M_contig1273.5496.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2406bp|location=Sequence derived from alignment at M-pyrifera_M_contig1273:2767..11544- (Macrocystis pyrifera P11B4 male)back to top |