mRNA_M-pyrifera_M_contig12698.5435.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12698.5435.1
Unique NamemRNA_M-pyrifera_M_contig12698.5435.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: A0A6H5JFI1_9PHAE (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFI1_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 4.790e-113
Identity = 181/216 (83.80%), Postives = 198/216 (91.67%), Query Frame = 1 
Query:    1 QIKQANDEALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREK-EPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEV 645
            QIKQA+DEA+V+RRRFQG+GDHMD+F  NFFLNGFVVKEVNV TWLR+D+VNPTLEEIQRFKSRREK +PG         NR+AEDKETEIMEDLAMAQAMEP +D PLFSKGDTVVV KGDL DLMG+VLRVRQTGQS +DA+VHIQPLVEELADEVVELKP+QLEKYIKVGGHVRIIDGR+TGETGTILK+VKNPDGASRAMVLTDMS+KELEV
Sbjct:  218 QIKQASDEAMVERRRFQGHGDHMDYFQNNFFLNGFVVKEVNVSTWLRADRVNPTLEEIQRFKSRREKRDPGXXXXXXXXRNRDAEDKETEIMEDLAMAQAMEPTSDAPLFSKGDTVVVAKGDLTDLMGRVLRVRQTGQSQADAVVHIQPLVEELADEVVELKPDQLEKYIKVGGHVRIIDGRFTGETGTILKIVKNPDGASRAMVLTDMSSKELEV 433
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: D7FI29_ECTSI (Transcription elongation factor SPT5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI29_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.250e-111
Identity = 180/217 (82.95%), Postives = 201/217 (92.63%), Query Frame = 1 
Query:    1 QIKQANDEALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREK-EPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            +IKQA+DEA+VDRRRFQG+GDHMD+F  NFFLNGFVVKEVNV TWLR+D+VNPTLEEIQRFKSRREK +PG       + NR+AEDK+TEIMEDLAMAQAMEP +D PLFSKGDTVVVVKGDL DLMG+VLRVRQTGQS +DA+VHIQPLVEELADEVVELKP+QLEKYIKVGGHVRIIDGR+TGETGTILK+VKNPDGASRAMVLTDMS+KELE++
Sbjct:  322 EIKQASDEAMVDRRRFQGHGDHMDYFQNNFFLNGFVVKEVNVSTWLRADRVNPTLEEIQRFKSRREKRDPGDGXXXXXERNRDAEDKDTEIMEDLAMAQAMEPTSDAPLFSKGDTVVVVKGDLTDLMGRVLRVRQTGQSQADAVVHIQPLVEELADEVVELKPDQLEKYIKVGGHVRIIDGRFTGETGTILKIVKNPDGASRAMVLTDMSSKELELQ 538
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BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: A0A0W8DSQ3_PHYNI (Uncharacterized protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DSQ3_PHYNI)

HSP 1 Score: 140 bits (352), Expect = 4.920e-35
Identity = 87/208 (41.83%), Postives = 127/208 (61.06%), Query Frame = 1 
Query:   25 ALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            A V RRR+   G+ MD F  +F+  GF++KEVN+ T L ++ VNPTL+EI RF S                    ED E    E LA  +A + KN + L +KGDTV V++GDL++LMG VL       +A+D  V + PL EE+ D +++ + +QL KY+KVG H+++I G Y+GETGT++  V + +GA  A+VL D  A+E++VR
Sbjct:  320 ADVARRRYPSTGEMMDTFDNDFYQEGFLIKEVNIATMLTTEDVNPTLDEINRFSSVA-----------------GEDGEHTAEEMLASVEADDWKNKVDL-TKGDTVRVIEGDLINLMGVVLSTN----TANDT-VRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVISGMYSGETGTVV-AVDDSEGAPVAIVLVDSMAREIQVR 503
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BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: A0A662WE80_9STRA (Transcription elongation factor SPT5 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WE80_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.610e-34
Identity = 84/208 (40.38%), Postives = 128/208 (61.54%), Query Frame = 1 
Query:   25 ALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            A V RRR+   G+ MD F  +F+ +GF++KEV++ T L +D VNPTL+EI RF S                    ED E    + LA  ++ + KN + L +KGDTV V++GDL++LMG VL       +A+D  V + PL EE+ D +++ + +QL KY+KVG H++++ G Y+GETGT++  V + +GA  A+VL D  A+E++VR
Sbjct:  322 ADVIRRRYPSTGEMMDSFDNDFYQDGFLIKEVSIATMLLTDDVNPTLDEINRFSS-----------------ATGEDGEHSAEDMLASVESDDWKNKVEL-TKGDTVRVIEGDLINLMGVVLSTN----TANDT-VRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGMYSGETGTVV-AVDDTEGAPVAIVLVDSMAREIQVR 505
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: M4BXU6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXU6_HYAAE)

HSP 1 Score: 137 bits (346), Expect = 7.920e-34
Identity = 84/208 (40.38%), Postives = 129/208 (62.02%), Query Frame = 1 
Query:   25 ALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            A + RRR+   G+ MD F  +F+ +GF++KEVN+ T L ++ +NPTLE+I RF S  E                 ED E    + LA  +A + K+ + L +KGDTV V++GDL++LMG VL       SA+D  V + PL EE+ D +++ + +QL KY+KVG H++++ G Y+GETGT++  V + +GA  A+VL D  A+E++VR
Sbjct:  331 ADLARRRYPSTGEMMDSFDNDFYQDGFLIKEVNIATMLTTEDLNPTLEDINRFSSVAE-----------------EDGEHTTKDMLASVEADDWKSKVEL-TKGDTVRVIEGDLINLMGVVLSTN----SANDT-VRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGMYSGETGTVV-AVDDSEGAPVAVVLVDSMAREIQVR 514
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: K3WKC8_GLOUD (Transcription elongation factor SPT5 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKC8_GLOUD)

HSP 1 Score: 137 bits (346), Expect = 8.540e-34
Identity = 81/206 (39.32%), Postives = 128/206 (62.14%), Query Frame = 1 
Query:   31 VDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            V RRR+   G+ +D F  +++ +GF++KEVN+ T L+ + VNPTL+EI +F +      GA +D +DD               LA   A + KN + L +KGDTV V++GDL++LMG VL       + S+  V + PL EE+ D +++ + +QL KY+KVG H++++ G Y+GETGT++  V + DG+  A+VL D  A+E++VR
Sbjct:  327 VVRRRYPSTGEMLDSFDNDWYKDGFLIKEVNINTMLQMEDVNPTLDEINKFSA-----IGAGEDGNDDF--------------LASVDADDWKNKVEL-TKGDTVRVIEGDLINLMGVVLST-----NTSNDTVRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGIYSGETGTVV-AVDDSDGSPVAIVLVDSMAREIQVR 506
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: A0A2D4BZ82_PYTIN (Transcription elongation factor SPT5, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZ82_PYTIN)

HSP 1 Score: 137 bits (345), Expect = 1.250e-33
Identity = 85/204 (41.67%), Postives = 129/204 (63.24%), Query Frame = 1 
Query:   37 RRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            RRR    G+ MDFF  +++ +GF++KEVN+ T L++++VNPTL+EI +F S    E GA     DD+               A   A + KN + L +KGDTV V++GDL++LMG V+       +A+D  V + PL EE+ D +++ + +QL KY+KVG H++++ GRY+GETGT++  V + DGA  A+VL D  AKE++VR
Sbjct:  336 RRRHPTTGEMMDFFENDYYKDGFLIKEVNIVTMLQTEEVNPTLDEINKFSSA-VGESGA-----DDV--------------AAPVDADDWKNRVDL-TKGDTVRVIEGDLINLMGVVVSTN----TANDT-VRVMPLHEEIKDTILDFQMKQLMKYVKVGDHIKVVSGRYSGETGTVV-AVDDTDGAPIAIVLVDSMAKEIQVR 512
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: A0A8K1CH86_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH86_PYTOL)

HSP 1 Score: 136 bits (343), Expect = 2.150e-33
Identity = 82/204 (40.20%), Postives = 129/204 (63.24%), Query Frame = 1 
Query:   37 RRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            RRR    G+ MDFF  +F+ +GF++KEVN+ T L+++ VNP L+EI +F S      G  +D  D++              +A  +A + KN + L +KGDTV V++GDL++LMG V+       +A+D  V + PL EE+ D +++ + +QL KY+KVG H++++ GRY+GETGT++  V + +GA  A+VL D  AKE++VR
Sbjct:  331 RRRHPTTGEMMDFFDNDFYKDGFLLKEVNIVTMLQTEDVNPNLDEINKFSS----VIGEDEDGSDEV--------------MANVEADDWKNRVEL-TKGDTVRVIEGDLINLMGVVVSTN----TANDT-VRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGRYSGETGTVV-AVDDSEGAPIAIVLVDSMAKEIQVR 509
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: H3GCB7_PHYRM (Transcription elongation factor SPT5 n=28 Tax=Peronosporaceae TaxID=4777 RepID=H3GCB7_PHYRM)

HSP 1 Score: 136 bits (342), Expect = 2.930e-33
Identity = 84/208 (40.38%), Postives = 126/208 (60.58%), Query Frame = 1 
Query:   25 ALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            A V RRR+   G+ MD F  +F+  G ++KEVN+ T L ++ VNP+L+EI RF S                    ED E    E LA  +A + KN + L +KGDTV V++GDL++LMG VL       +A+D  V + PL EE+ D +++ + +QL KY+KVG H++++ G Y+GETGT++  V + +GA  A+VL D  A+E++VR
Sbjct:  321 ADVARRRYPSTGEMMDTFDNDFYQEGLLIKEVNIATMLTTEDVNPSLDEINRFSSVA-----------------GEDGEHSAEEMLASVEADDWKNKVEL-TKGDTVRVIEGDLVNLMGVVLSTN----TANDT-VRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGMYSGETGTVV-AVDDSEGAPVAIVLVDSMAREIQVR 504
[Close]
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Match: F0W3M6_9STRA (Transcription elongation factor SPT5 n=2 Tax=Albugo TaxID=65356 RepID=F0W3M6_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.420e-33
Identity = 79/206 (38.35%), Postives = 130/206 (63.11%), Query Frame = 1 
Query:   31 VDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDKVNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAMEPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLVEELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGASRAMVLTDMSAKELEVR 648
            V RRR+   G+ MDF+  +++ +GF++KEVN+   L++++VNP L+EI +F +  E+E        DD N+            LA  +  + KN + L +KGDTV VV+GDL++LMG V+       + ++ +V + PL EE+ D +++ + +QL KY+KVG H++++ G Y+GETGT++  V + +GA  A+VL D  AKE++VR
Sbjct:  325 VVRRRYPATGEMMDFYDNDYYQDGFLIKEVNINMMLQTEEVNPRLDEINKFAAVAERE--------DDGNQEL----------LASMETGDWKNKVEL-AKGDTVRVVEGDLLNLMGIVVST-----NTANNLVRVMPLHEEIKDTILDFQVKQLIKYVKVGDHIKVVSGMYSGETGTVV-AVDDTEGAPVAIVLVDSMAKEIQVR 505
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12698.5435.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFI1_9PHAE4.790e-11383.80Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
D7FI29_ECTSI1.250e-11182.95Transcription elongation factor SPT5 n=1 Tax=Ectoc... [more]
A0A0W8DSQ3_PHYNI4.920e-3541.83Uncharacterized protein n=1 Tax=Phytophthora nicot... [more]
A0A662WE80_9STRA4.610e-3440.38Transcription elongation factor SPT5 n=1 Tax=Notho... [more]
M4BXU6_HYAAE7.920e-3440.38Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
K3WKC8_GLOUD8.540e-3439.32Transcription elongation factor SPT5 n=1 Tax=Globi... [more]
A0A2D4BZ82_PYTIN1.250e-3341.67Transcription elongation factor SPT5, putative n=1... [more]
A0A8K1CH86_PYTOL2.150e-3340.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GCB7_PHYRM2.930e-3340.38Transcription elongation factor SPT5 n=28 Tax=Pero... [more]
F0W3M6_9STRA5.420e-3338.35Transcription elongation factor SPT5 n=2 Tax=Albug... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12698contigM-pyrifera_M_contig12698:4022..8997 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.5
Seed ortholog evalue1.7e-95
Seed eggNOG ortholog2880.D7FI29
KEGG koko:K11292,ko:K15172
Hectar predicted targeting categoryother localisation
EggNOG free text desc.regulation of DNA-templated transcription, elongation
EggNOG OGsCOG5164@1,KOG1999@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03019,ko03021,ko03036
Exons6
Model size648
Cds size648
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12698.5435.1prot_M-pyrifera_M_contig12698.5435.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12698 4022..8997 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815783.7040875-CDS-M-pyrifera_M_contig12698:4021..41381622815783.7040875-CDS-M-pyrifera_M_contig12698:4021..4138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 4022..4138 +
1692277567.5346556-CDS-M-pyrifera_M_contig12698:4021..41381692277567.5346556-CDS-M-pyrifera_M_contig12698:4021..4138Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 4022..4138 +
1622815783.7188833-CDS-M-pyrifera_M_contig12698:4983..50751622815783.7188833-CDS-M-pyrifera_M_contig12698:4983..5075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 4984..5075 +
1692277567.546985-CDS-M-pyrifera_M_contig12698:4983..50751692277567.546985-CDS-M-pyrifera_M_contig12698:4983..5075Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 4984..5075 +
1622815783.7299488-CDS-M-pyrifera_M_contig12698:5733..58391622815783.7299488-CDS-M-pyrifera_M_contig12698:5733..5839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 5734..5839 +
1692277567.5591044-CDS-M-pyrifera_M_contig12698:5733..58391692277567.5591044-CDS-M-pyrifera_M_contig12698:5733..5839Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 5734..5839 +
1622815783.7408786-CDS-M-pyrifera_M_contig12698:7271..73581622815783.7408786-CDS-M-pyrifera_M_contig12698:7271..7358Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 7272..7358 +
1692277567.5772655-CDS-M-pyrifera_M_contig12698:7271..73581692277567.5772655-CDS-M-pyrifera_M_contig12698:7271..7358Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 7272..7358 +
1622815783.7522311-CDS-M-pyrifera_M_contig12698:7677..78171622815783.7522311-CDS-M-pyrifera_M_contig12698:7677..7817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 7678..7817 +
1692277567.5921354-CDS-M-pyrifera_M_contig12698:7677..78171692277567.5921354-CDS-M-pyrifera_M_contig12698:7677..7817Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 7678..7817 +
1622815783.7658617-CDS-M-pyrifera_M_contig12698:8891..89971622815783.7658617-CDS-M-pyrifera_M_contig12698:8891..8997Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 8892..8997 +
1692277567.6042016-CDS-M-pyrifera_M_contig12698:8891..89971692277567.6042016-CDS-M-pyrifera_M_contig12698:8891..8997Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12698 8892..8997 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12698.5435.1

>prot_M-pyrifera_M_contig12698.5435.1 ID=prot_M-pyrifera_M_contig12698.5435.1|Name=mRNA_M-pyrifera_M_contig12698.5435.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp
QIKQANDEALVDRRRFQGNGDHMDFFMGNFFLNGFVVKEVNVGTWLRSDK
VNPTLEEIQRFKSRREKEPGASDDSDDDINRNAEDKETEIMEDLAMAQAM
EPKNDIPLFSKGDTVVVVKGDLMDLMGKVLRVRQTGQSASDAIVHIQPLV
EELADEVVELKPEQLEKYIKVGGHVRIIDGRYTGETGTILKVVKNPDGAS
RAMVLTDMSAKELEVR
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mRNA from alignment at M-pyrifera_M_contig12698:4022..8997+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12698.5435.1 ID=mRNA_M-pyrifera_M_contig12698.5435.1|Name=mRNA_M-pyrifera_M_contig12698.5435.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4976bp|location=Sequence derived from alignment at M-pyrifera_M_contig12698:4022..8997+ (Macrocystis pyrifera P11B4 male)
CAGATCAAGCAAGCGAACGATGAGGCGTTGGTGGACCGTCGACGATTCCA
AGGCAATGGCGATCACATGGACTTTTTCATGGGAAATTTCTTCCTGAACG
GATTCGTGGTGAAGGAGGTGAGGAGGGAGAGGAGGGGAGGGAAGGGGGGG
GGGAGAAGGGAAGGAGGGCGGGTGGGGGGGGGGGGGCGTAGGGAGGGTGG
AAAGGAGGGAGGGAAGGTTGGGGGATTAGGAGAGGGAGGGAGGGAGTTGA
ACAAGGATGGAGGGATGGAAGGGGGGGAGGGAGTTGAACAAGGATGGAGG
GATGGAGGGGGGGGGGGTGTAGTGTAAAGGGTGAATTAATGCTTGCTGCC
GGGGCCGTTGGAAGTTGTGTGTGTACTGCTGTAGCTTGGGGATCAGCTAA
ATGACACGCATGTTGTTGTTGTTGTTGTTGCTGTTGCTGTTGCTGTTGCT
GTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGT
TGCTGTTGCTGTTGCTGTTGTCGTTGACGACGATACCGTTGTCAGGTGTT
GGAGACGAGCACCTCTTTCACCAGCACGCGGGGATCCTACTACTGTACAG
GAGCTCCTGCTGTTCACGCTACATATTCGTGCTCGTATCCGTAATATGTT
GTTGTTTTGTTTCTGTACCGATGTGCCTCGCGCGCCACGCACTTAGCTAA
CCCTATCCGCTGCTACAGCTGTTCTTTGTCGGCGTGGTTTATGGGCGTCG
GTCGAATCAATTAAAAAAAAAAAACTAGGAAATGCTACCCCGCGCCCCTT
GATCCCCCCCCCACCCCTGCTCCCCCGCGTTGCGTCGTGCTGCTGTGCTG
TTCTGTGTGCTGTGCTGTTGTGTTGCGCTGTGTCGTCGTGTTGTGTGTCG
TGGTGCTGTCTTGTTTACGTTTGCTTCTTTGGTTCTTTGGTTCTTTGCTT
GGGTGTGAACAGGTGAACGTGGGCACGTGGCTACGTTCGGACAAGGTTAA
CCCCACGCTCGAAGAGATCCAGCGCTTCAAAAGTCGAAGGGAGAAGGAAC
CTGGGTGAGAGAGGAGGGGAAAATGGGGGAGACGGGTGGGGTGGGTGGGG
TGGGTGGGAATGCGTAGTGTGGTGGTGGTGGTGGTGGTGGTAGAGTAGTA
CTATCGGCAATAGTACAGCAGTATAGTAGAAATAGAGTAGCAGAAAGAGG
ACCGACGGAGGCGGAGACGTTTAATAGAAAAAACGGGTTTAAAAGAGGTA
AGAGAACACCAGTACATATCATACGTCAAGCAACAGAAGTGAGTATGCCG
GTACGAATCGACTGTTTGACGGCTTTGCTTCTGCAGGCGCCGCAGGGGTT
CGTTTTTTTTAACTGAACATCATTCCAGTCCCTTTTTTCGCTTCCCCTTC
TTGTACGTAAATTGTCTCTTGGGCTGTTTTTTTGCCGCTTGGTTGATATT
TTTCTTTCCATTCGTTTTATGGGCGGCTTCTGTACCGGTCCTAACGGCGG
GACTCGGTGGTCCGGATTCGGATGCGGACTCGGGGGTTCGGATTCAATTT
TTGGTATTTTGTATTCGGATGTTGATTTGGATTCGATATTCGGTTTTTGT
TTTTGTTGTGATTCGGAATTCGATTTGGATTCGGATTCAAATTTTGGTTC
ATGTGTTTCATTCGGATTTTGATTCGGATTCGGATTATAATTCGGGATCG
GAATCTGTGCAGCGCGTCGGACGACAGCGACGACGACATCAACCGCAACG
CTGAAGACAAGGAGACGGAGATTATGGAGGACCTTGCTATGGCTCAGGCG
ATGGAGCCCAAGAATGATGTGAGATCTGCCCTAAGTTTCTGCTGGGGATG
TGCTCTGGGTGGGGTTGTGTTACATTCGTCCTCACCTGTACAGTAGTTTC
CAGCTTGACTCGCGAGAGTTTTTTACACTCGGCGGCCTTGTAAGTAGGCG
CGCCATGATTGTTACGTGTAGTAGTACTACTACTAGTACTAGTACTACTA
CTACTACTACTACTACTACTGCTGCTACTACTACTACTACTACTACTACT
ACTACTACTACTACTACTACTACTACTTCTGCCTGTACTACTTCTGCCAC
TACTGCTAATACTACTGCTATATACAACTACTACTGCTACTACTACTACT
ACTACTATATACTATTAATACTACTACTGCTACTACCACTACTACTACTA
CAACTATTGTACTACTACTGACAGTACGGGCGGGCATAGGAATTAGAATC
TACGATGGACGCAAAAAATCACATACTCCCCTTATGTGTACCCACCATAG
ATGGTTCTGATTACTGCTGTATGCTCCCCCGTCGTATTGGTAGCGCTTTA
CTTGGTACAACTGGAATGTTGTACCTGTGCTGCTGCGGTAGGCTGTGTTG
CTTTCAGTGGGCTTCGTTGCGGGCTTGTACTGCTTACGCTAGGGTTTACC
GTTTACACCAGTAGGCTGTCGCTGCAAGTAGTAGGCTCTCGTACATACTG
TAAGTACAGTAGTATGCTTTTCCACCAATAGGTTCTACTGCTATATTTCA
AGGTCTGCTGCAGTTGATAGGATCTGTTATTACGGGGGTCCATAGTAAAT
AAGACCAAATATTCTCAGTAAAAATACGGAAATGTATAGGTTTTTATGTA
TACCATAGGTCCTATTAACTATGGACCCCCGTAATAATAGTGTCGTGCTG
TTACCCATGGGCTCTACTGCTGCATTCCAATGCTTACTGCAGTTGATAGG
GTCTACGGAGGTACTGCTATCAATAGGGCTCTACTGCATAGGCTCTACTG
TTGTATTCCTGTATCCAGTGGCTGACCGAATTTTTCCTTCCTATCCGCCC
GTGTCTCGTGCCTCGTGTCTCGTGCCTCGTGTCTCGTGTCTCGCGTCTAA
TGTCTCTTGTCTCGTGTCTCATGCCTCTTGTCTCGTGCATTGTGCCTCGT
TTCTCGTGCCTCGTGCCTCTTGCTTTGTATCTTATGTCTCGTGTCTGCAT
CTGCACGTGCTGGTGTCTTGCGTGACTGACCACTTGACTCTCCGCGCGGC
GGCTGGTTTGCGCTACCGATCGGAACCGATATGGAACCAACCCAATACCA
AACCAAACGGAAATGGAAACGGAAACGGCGACCGAAAACACTAAACCGAA
AAAAAACGAAACCGAAACCGAACCGAATGAACTCCGTAAACCGAATACGG
AAATCGAAACCGAAATCGAAACCGAAAATGAAATATGACGGGGAGCACAG
ATCCCGCTGTTCTCCAAGGGCGACACGGTGGTGGTGGTCAAGGGAGACCT
TATGGACCTCATGGGGAAGGTGTTGAGGGTCAGGCAGGTAAGATTATCTT
TTTTAGAAATGCCTGATAATATATACGTACGTGGTGTTCCATAGTAAGGC
GGCGGGCGTGGGTAGCACTGGCTGTTGCATGACTCCTGGGTGACTGTTGT
ACGCCTGCGTGGCATTGCTGTGTGGCAATGGTGTATGGCTGCAGCATGGC
TCATGATGCGTGACGATGCTGGATGACTGCTGCGTAACGTGTGCTGCACG
ACCCATGTCTGCGTGATTGTAGTAATGGCTATTGTGTGTGCTGCGTGGGT
GATGTACGTTTCATTGTGTGACGTATGGCGCTGCTGTGTATGTAACGGTT
TTGCAGACGGGACAATCGGCCTCGGATGCCATCGTGCACATCCAACCCCT
CGTCGAAGAGCTGGCGGATGAGGTGGTAGAGTTGAAGCCCGAACAGCTGG
AAAAGTACATCAAGGTCGGCGGGCACGTCAGGATCATCGATGGCAGGTGC
GCTGAGCGTTGGTGATACTGGCAGGGTGGTTGCGAAGAATTTGGTTGGAA
CCGAATCGGTCGGGTTTCTTGTAGTCTATTTTCTACATGAAAAGGACCCC
TCCTACACATGAAATATTCCCGAGAGTTTTTACCCAACCCAAAAACAATC
AGGTCAAACATGGCATTTTGGCAACATATTGCAACACAACCTTAGAAAGA
TCCCTAAAGTTTCGTCGGCTGGGATCATTATTGTACTTAAGAGTAGGAAA
CAGACCATAAGAAAAATCCAGTTGGTTTCAACCAATTTCTTCCCAAACTC
TCTGATGACGGTGGTGAGTGCTGGTGGTAGGTATTACGGGGGGCCATGGT
AAATACCAGGTAAGACCTAATATTGTCAGTAAAAATAGCGAAATATGTAC
CTGGTAGGTTTTTGTGTGTACCGTAGGTCGTATTTAATATGATCCCCCGT
AAATAGTGTGGATGGTGGTGTTGGTGTAGGTGTAGGTACAGGTACTAACG
CTGACATCGCTACAAGCATGAAGGTCCTGAACGACGCCATCATCGTCATT
ATCACATGGTGGTGTTATTCATAGTGACTGAATCATGGTTACTTACTGGT
CTCGGGAAAAAGGTCGATTCAACGTTTTTACGGGTCAGGACAGAATAATC
GGTTCCCGCGCTTGATGTTGATGCGTGTAGATAGATATATTCAGGGCACA
CATACAGTAGATTCCTACCCTGGTCTGTGTATGATGTGGCCGGGTAGGAG
CCGGGCAACGCTGTAGGATCTGTTTTTTGTCCTGTGGTCCTGTGGGTTGG
ACCTGCACCATCCAGGTCCTGCACATCATCTCATAACGGCACGTTAGGAT
CTAGATCTGTCTGTAGACGATCTATATGTAGATTATCTATCTGTAGATGA
TCTGTCTGTAGACGATCTGTGTGTAGATGATCTATCTGTAGATGATCTGT
CTGTAGATGATCTATCTGATCTGCAGATGGTCTATCTGATCTGCAGATGG
TCTGTCTGTCTGTCCGACGTGTGAAAAGGATGTGTGGAACATTTACCTTC
TCTTTTGTTGACCTGACCAGGTATACTGGCGAGACGGGAACTATCCTGAA
GGTGGTCAAGAACCCTGACGGGGCGAGCAGGGCCATGGTGCTCACAGACA
TGAGCGCCAAAGAGCTGGAGGTGCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12698:4022..8997+

>mRNA_M-pyrifera_M_contig12698.5435.1 ID=mRNA_M-pyrifera_M_contig12698.5435.1|Name=mRNA_M-pyrifera_M_contig12698.5435.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig12698:4022..8997+ (Macrocystis pyrifera P11B4 male)
CAGATCAAGCAAGCGAACGATGAGGCGTTGGTGGACCGTCGACGATTCCA
AGGCAATGGCGATCACATGGACTTTTTCATGGGAAATTTCTTCCTGAACG
GATTCGTGGTGAAGGAGCAGATCAAGCAAGCGAACGATGAGGCGTTGGTG
GACCGTCGACGATTCCAAGGCAATGGCGATCACATGGACTTTTTCATGGG
AAATTTCTTCCTGAACGGATTCGTGGTGAAGGAGGTGAACGTGGGCACGT
GGCTACGTTCGGACAAGGTTAACCCCACGCTCGAAGAGATCCAGCGCTTC
AAAAGTCGAAGGGAGAAGGAACCTGGGTGAACGTGGGCACGTGGCTACGT
TCGGACAAGGTTAACCCCACGCTCGAAGAGATCCAGCGCTTCAAAAGTCG
AAGGGAGAAGGAACCTGGCGCGTCGGACGACAGCGACGACGACATCAACC
GCAACGCTGAAGACAAGGAGACGGAGATTATGGAGGACCTTGCTATGGCT
CAGGCGATGGAGCCCAAGAATGATCGCGTCGGACGACAGCGACGACGACA
TCAACCGCAACGCTGAAGACAAGGAGACGGAGATTATGGAGGACCTTGCT
ATGGCTCAGGCGATGGAGCCCAAGAATGATATCCCGCTGTTCTCCAAGGG
CGACACGGTGGTGGTGGTCAAGGGAGACCTTATGGACCTCATGGGGAAGG
TGTTGAGGGTCAGGCAGATCCCGCTGTTCTCCAAGGGCGACACGGTGGTG
GTGGTCAAGGGAGACCTTATGGACCTCATGGGGAAGGTGTTGAGGGTCAG
GCAGACGGGACAATCGGCCTCGGATGCCATCGTGCACATCCAACCCCTCG
TCGAAGAGCTGGCGGATGAGGTGGTAGAGTTGAAGCCCGAACAGCTGGAA
AAGTACATCAAGGTCGGCGGGCACGTCAGGATCATCGATGGCAGACGGGA
CAATCGGCCTCGGATGCCATCGTGCACATCCAACCCCTCGTCGAAGAGCT
GGCGGATGAGGTGGTAGAGTTGAAGCCCGAACAGCTGGAAAAGTACATCA
AGGTCGGCGGGCACGTCAGGATCATCGATGGCAGGTATACTGGCGAGACG
GGAACTATCCTGAAGGTGGTCAAGAACCCTGACGGGGCGAGCAGGGCCAT
GGTGCTCACAGACATGAGCGCCAAAGAGCTGGAGGTGCGTGTATACTGGC
GAGACGGGAACTATCCTGAAGGTGGTCAAGAACCCTGACGGGGCGAGCAG
GGCCATGGTGCTCACAGACATGAGCGCCAAAGAGCTGGAGGTGCGT
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