mRNA_M-pyrifera_M_contig126913.5422.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A640Y9Z6_9BACT (Amino acid permease n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A640Y9Z6_9BACT) HSP 1 Score: 176 bits (446), Expect = 6.260e-50 Identity = 96/168 (57.14%), Postives = 120/168 (71.43%), Query Frame = 1
Query: 10 ALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHP-DLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
ALL G ESAR N +V +KL LVLFI VG F + SNW+PFVP SEG FGDFG G+ RAAGVVF Y+ FDA++TA+ EARRP R++P LLAT++ +T LYV + +VMTGLVPYG LNV DPL +A+ A L WL ++ AA++GLAA VL +GQ+RI
Sbjct: 169 ALLYLGTRESARANNAMVALKLGVLVLFIVVGTFYVTRSNWEPFVPASEGGFGDFGPTGILRAAGVVFFAYVGFDAVSTAAAEARRPQRTIPFGLLATVLISTVLYVLIGIVMTGLVPYGSLNVADPLALAVRAGGGSLDWLESAISAAAVIGLAATVLVTFYGQTRI 336
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A351ZY72_9BACT (Amino acid permease (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A351ZY72_9BACT) HSP 1 Score: 168 bits (426), Expect = 7.050e-48 Identity = 89/176 (50.57%), Postives = 126/176 (71.59%), Query Frame = 1
Query: 1 LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAH--PD----LGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
L+ LLI+G ESA N ++V IKL+ ++LFI G ++A NW PF+P + G FG++G +G+FRAAGV+F YI FDA++TA+QEA+ P R +P+ +LA+L T LY+ V+LV+TG+VPY +LNVPDP+ VA+DA PD LGWL +V + AI GL++ +L +L GQ RI
Sbjct: 176 LITILLIKGIRESATFNNVIVVIKLIVILLFIGFGFQYVNAENWTPFIPENTGNFGEYGWSGIFRAAGVIFFAYIGFDAVSTAAQEAKNPQRDMPIGILASLAVCTVLYILVSLVLTGIVPYTMLNVPDPIAVAVDAARLPDGSLALGWLSPLVKIGAIAGLSSVILVMLMGQPRI 351
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A7W0YM11_9BACT (Amino acid permease n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A7W0YM11_9BACT) HSP 1 Score: 168 bits (426), Expect = 6.850e-47 Identity = 89/170 (52.35%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEGFGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAH-PDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
L+ LLI G SESA+ N ++V IKL ++LFI G I+ NW+PFVPP++G G FG G+ R AGV+F YI FDA++TA+QE R P R +P+ +L +L T LYV+VALV+TG+V Y LNVPDP+ V +DA P L WLR VV + AI GL++ +L +L GQ RI
Sbjct: 187 LITILLIVGISESAKFNNVVVVIKLTVVLLFIGFGLAFINRENWEPFVPPAQGDGRFGWDGIVRGAGVIFFAYIGFDAVSTAAQETRNPQRDMPIGILGSLAICTVLYVSVALVLTGIVDYSQLNVPDPIAVGIDAAGPSLAWLRPVVKIGAIAGLSSVILVMLLGQPRI 356
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A7V2F5E8_RHOMR (Amino acid permease n=2 Tax=Bacteria TaxID=2 RepID=A0A7V2F5E8_RHOMR) HSP 1 Score: 168 bits (425), Expect = 7.770e-47 Identity = 87/171 (50.88%), Postives = 124/171 (72.51%), Query Frame = 1
Query: 1 LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDA-HPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
L+ LL+ G ESA +N ++V +K+ L+LFI G F I+ NW+PF+PP+EG FG +G +G+ R AGV+F YI FDA++TA+QEAR P R +P+ +L +L +T LYV VALV+TG+V Y +LNVPDP+ VA+DA P+L WLR ++ + AI GL++ +L +L GQ RI
Sbjct: 179 LMTTLLVIGIRESATMNNLVVMVKIFVLLLFIGAGIFFINPDNWEPFIPPNEGKFGIYGWSGILRGAGVIFFAYIGFDAVSTAAQEARNPQRDMPIGILGSLGISTLLYVVVALVLTGIVSYKMLNVPDPIAVAVDAVGPELFWLRPLIKIGAIAGLSSVILVMLLGQPRI 349
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A831X6N7_9BACT (Amino acid permease (Fragment) n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A831X6N7_9BACT) HSP 1 Score: 167 bits (422), Expect = 9.140e-47 Identity = 89/169 (52.66%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 4 VGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
V LLI G ESA NA +V +K+ ++LFI GA ++ NW PFVPPS G FG FG +GV R AGV+F YI FDA++TA+QEARRP R +P+ +LA+L T LY+AV+ V+TG+V Y LNVPDP+ V +DA LGWLR ++ + AI GL++ +L +L GQ RI
Sbjct: 175 VSGLLILGIRESAGTNAAIVLVKVAVILLFIGFGASFVNPENWKPFVPPSTGEFGQFGWSGVLRGAGVIFFAYIGFDAVSTAAQEARRPQRDMPIGILASLAICTVLYIAVSAVLTGIVHYSKLNVPDPMAVGIDAT-GLGWLRPLIKLGAIAGLSSVILVMLLGQPRI 342
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A7J9YVE8_9ACTN (Amino acid permease n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7J9YVE8_9ACTN) HSP 1 Score: 167 bits (424), Expect = 9.950e-47 Identity = 91/167 (54.49%), Postives = 119/167 (71.26%), Query Frame = 1
Query: 13 LLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLG-VALDAHPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
LL G ESAR N +V +K+ L+ F GAF + +N +PFVPP+EG FGD+GV+G+ RAAGVVF Y+ FDA++TA+ EARRP R++PV LLAT+ +TALYV + +VMTGLV Y L+VPDP+ A A P L WL V+VAA++GLAA VL +GQ+RI
Sbjct: 170 LLFLGMRESARANNAMVALKIGVLIAFAIAGAFFVTGANLEPFVPPNEGGFGDYGVSGILRAAGVVFFAYVGFDAVSTAAAEARRPQRTIPVGLLATVAISTALYVVIGVVMTGLVDYHRLDVPDPIAEAARAAGPSLAWLETAVSVAAVVGLAATVLVTFYGQTRI 336
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A1F5ITP0_9BACT (Amino acid permease n=1 Tax=Candidatus Dadabacteria bacterium RIFCSPHIGHO2_12_FULL_53_21 TaxID=1797756 RepID=A0A1F5ITP0_9BACT) HSP 1 Score: 167 bits (424), Expect = 1.010e-46 Identity = 88/167 (52.69%), Postives = 120/167 (71.86%), Query Frame = 1
Query: 13 LLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHPD-LGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
LL G ESA +++V IKL L++FI VG F I+ NW PF+PP+EG FG FG +GV R AGV+F YI FDA++TA+QE R P R++P+ +L +LV AT LY+ VALV+TG+V Y +LNVPDP+ VA+D + L WLR ++ + AI GL + ++ LLFGQ+RI
Sbjct: 182 LLTMGIRESAAATSLIVIIKLTVLLVFIGVGFFYINRENWQPFIPPNEGTFGHFGWSGVLRGAGVIFFAYIGFDAVSTAAQETRNPQRNVPIGILGSLVVATVLYIVVALVLTGVVKYSMLNVPDPIAVAVDFMGEKLYWLRPLIKIGAIAGLTSVIIVLLFGQTRI 348
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A2V7HM72_9BACT (Amino acid permease n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7HM72_9BACT) HSP 1 Score: 167 bits (424), Expect = 1.090e-46 Identity = 88/170 (51.76%), Postives = 123/170 (72.35%), Query Frame = 1
Query: 1 LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
L+ LLI G ESARVN +V IK+L L+LF+AVGA ++ +NW PF+PP+ G FG FG +G+ R AG++F YI FDA++TASQEA+ PGRS+P+ +L +L T +Y+AV LVMTGLVPY L+VP P+ +A+ A + WL ++N+ AI G+++ +L L GQSRI
Sbjct: 174 LLTGLLIIGIRESARVNTAIVIIKVLVLMLFVAVGAHYVNTANWHPFIPPNAGEFGAFGYSGIVRGAGLIFFAYIGFDAVSTASQEAKNPGRSVPIGILGSLAICTVIYIAVGLVMTGLVPYQQLDVPSPIALAVRAT-GVQWLAPIINIGAICGISSVILVNLLGQSRI 342
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A1F3M0K5_9BACT (Amino acid permease n=1 Tax=Bacteroidetes bacterium GWF2_49_14 TaxID=1797354 RepID=A0A1F3M0K5_9BACT) HSP 1 Score: 167 bits (423), Expect = 1.610e-46 Identity = 83/170 (48.82%), Postives = 117/170 (68.82%), Query Frame = 1
Query: 1 LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEG-FGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
LV LLI G ESAR N I+V IKL ++ FI G F I+++NW PF+P + G FG FG++G+FR A V+F YI FDA++TA+ E++ P R LP+ +L +L+ T LY+ V LV+TG+VPY L VPDP+ V +DA P L WL ++ + A+ GL++ +L +L GQ RI
Sbjct: 180 LVTVLLITGVKESARFNNIIVAIKLTVIIAFILAGVFFINSANWQPFIPENTGTFGHFGISGIFRGAAVIFFAYIGFDAVSTAALESKNPQRDLPIGILGSLLICTVLYILVGLVLTGIVPYTQLGVPDPIAVGVDAVPQLKWLSPLIKIGAVAGLSSVILVMLMGQPRI 349
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Match: A0A0A0EPB9_9GAMM (Amino acid permease n=2 Tax=Lysobacter TaxID=68 RepID=A0A0A0EPB9_9GAMM) HSP 1 Score: 166 bits (421), Expect = 3.270e-46 Identity = 81/161 (50.31%), Postives = 118/161 (73.29%), Query Frame = 1
Query: 25 GASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPSEGFGDFGVAGVFRAAGVVFLTYISFDAIATASQEARRPGRSLPVALLATLVAATALYVAVALVMTGLVPYGVLNVPDPLGVALDAHPDLGWLRQVVNVAAILGLAAGVLALLFGQSRI 507
G S+SA VN+++V IK++A+++FIA A ID +NW PF+P +EG G FG +GV RAA +VF YI FDA++TA+ EA+ P R +P+ +L +LV T LY+ V+ V+TG++P+ +LN P+P+ ALD +P L WL+ VV VAAI GL++ +L +L GQ RI
Sbjct: 193 GISQSAIVNSVIVAIKVVAILMFIAFSAKYIDVANWQPFIPENEGPGKFGTSGVVRAAAIVFFAYIGFDAVSTAAGEAKNPQRDMPIGILGSLVICTILYIVVSAVLTGIMPFQLLNTPEPVSTALDNYPSLRWLQTVVQVAAIAGLSSVILVMLMGQPRI 353 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126913.5422.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126913.5422.1 >prot_M-pyrifera_M_contig126913.5422.1 ID=prot_M-pyrifera_M_contig126913.5422.1|Name=mRNA_M-pyrifera_M_contig126913.5422.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp LVGALLIRGASESARVNAILVGIKLLALVLFIAVGAFAIDASNWDPFVPPback to top mRNA from alignment at M-pyrifera_M_contig126913:2..508+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126913.5422.1 ID=mRNA_M-pyrifera_M_contig126913.5422.1|Name=mRNA_M-pyrifera_M_contig126913.5422.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=507bp|location=Sequence derived from alignment at M-pyrifera_M_contig126913:2..508+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126913:2..508+ >mRNA_M-pyrifera_M_contig126913.5422.1 ID=mRNA_M-pyrifera_M_contig126913.5422.1|Name=mRNA_M-pyrifera_M_contig126913.5422.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1014bp|location=Sequence derived from alignment at M-pyrifera_M_contig126913:2..508+ (Macrocystis pyrifera P11B4 male)back to top |