mRNA_M-pyrifera_M_contig126480.5340.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig126480.5340.1
Unique NamemRNA_M-pyrifera_M_contig126480.5340.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A2J0LHK5_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase (Fragment) n=1 Tax=Candidatus Omnitrophica bacterium CG12_big_fil_rev_8_21_14_0_65_50_5 TaxID=1974754 RepID=A0A2J0LHK5_9BACT)

HSP 1 Score: 175 bits (443), Expect = 5.640e-55
Identity = 80/101 (79.21%), Postives = 94/101 (93.07%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQYNA++ALDMGL+N VVPL+QLE ET++WC+EIL +SP+A+RCLKA+LNAD DGQAGLQELAG+ATML+YMSEEGQEGRNA+ QKRKPDF KFPK P
Sbjct:    9 FLCRQYNAQEALDMGLVNIVVPLEQLETETIQWCKEILANSPMAIRCLKAALNADCDGQAGLQELAGNATMLYYMSEEGQEGRNAFVQKRKPDFSKFPKRP 109
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: C4L9G1_TOLAT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=3 Tax=Tolumonas TaxID=43947 RepID=C4L9G1_TOLAT)

HSP 1 Score: 180 bits (456), Expect = 1.350e-54
Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQY+A+QALDMGL+NTVVPL +LE ETV WCREILQHSP+ALRCLKA+LNAD DGQAGLQELAG+ATMLFYM+EEGQEGRNA+N+KR+PDF KFP+ P
Sbjct:  186 FLCRQYDAQQALDMGLVNTVVPLAELEKETVRWCREILQHSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNEKREPDFNKFPRNP 286
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: B4S4J6_PROA2 (1,4-dihydroxy-2-naphthoyl-CoA synthase n=11 Tax=Chlorobiaceae TaxID=191412 RepID=B4S4J6_PROA2)

HSP 1 Score: 178 bits (452), Expect = 3.750e-54
Identity = 80/101 (79.21%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            +LCRQYNA++ALDMGL+NTVVPL++LE ETVEWCREILQHSP++LRCLK++LNAD DGQAGLQELAG+AT+L+YMSEE QEG+NA+ +KRKPDFGKFPK P
Sbjct:  173 YLCRQYNAQEALDMGLVNTVVPLERLEEETVEWCREILQHSPLSLRCLKSALNADCDGQAGLQELAGNATLLYYMSEEAQEGKNAFVEKRKPDFGKFPKRP 273
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A2G6CZQ5_9PROT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6CZQ5_9PROT)

HSP 1 Score: 179 bits (453), Expect = 4.280e-54
Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQYNAEQALDMGL+NTVVPL +LE ETV+WCR+ILQHSP+ALRCLK++ NAD DGQAGLQELAG+ATMLFYM+EEGQEGR+AY +KRKPDFG+F + P
Sbjct:  190 FLCRQYNAEQALDMGLVNTVVPLQELEQETVDWCRQILQHSPLALRCLKSAFNADTDGQAGLQELAGNATMLFYMTEEGQEGRDAYLEKRKPDFGRFKRQP 290
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A6C8GL67_SALET (Naphthoate synthase n=1 Tax=Salmonella enterica subsp. enterica serovar Adelaide str. A4-669 TaxID=913063 RepID=A0A6C8GL67_SALET)

HSP 1 Score: 173 bits (439), Expect = 8.430e-54
Identity = 81/101 (80.20%), Postives = 93/101 (92.08%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQY+A+QALDMGL+NTVVPL  LE ETV WCRE+LQ+SP+ALRCLKA+LNAD DGQAGLQELAG+ATMLFYM+EEGQEGRNA+NQKR+PDF KF + P
Sbjct:   50 FLCRQYDAQQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP 150
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A496PRK3_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A496PRK3_9BACT)

HSP 1 Score: 177 bits (449), Expect = 1.070e-53
Identity = 83/101 (82.18%), Postives = 95/101 (94.06%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQYNA+QAL+MGLINTVVPLD+LE ETV+WCREIL +SPIA+RCLKA+LNAD DGQAGLQELAG+ATMLFYM+EEGQEGRNA+ +KRKPDF KFP+ P
Sbjct:  173 FLCRQYNAKQALEMGLINTVVPLDKLEDETVKWCREILANSPIAIRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFVEKRKPDFSKFPRQP 273
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A660PZS4_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A660PZS4_9BACT)

HSP 1 Score: 177 bits (448), Expect = 1.510e-53
Identity = 80/101 (79.21%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQY+A+QALDMGL+NTVVPLD+LE ETV+WCREIL +SP+A+RCLKA++NAD DGQAGL+ELAG+ATMLFYMSEEGQEGRNA+N+KRKP+F KFP+ P
Sbjct:  173 FLCRQYHAQQALDMGLVNTVVPLDRLEEETVQWCREILANSPMAIRCLKAAMNADCDGQAGLRELAGNATMLFYMSEEGQEGRNAFNEKRKPNFSKFPRQP 273
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BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A231MTL4_9GAMM (1,4-dihydroxy-2-naphthoyl-CoA synthase (Fragment) n=1 Tax=Zobellella denitrificans TaxID=347534 RepID=A0A231MTL4_9GAMM)

HSP 1 Score: 174 bits (442), Expect = 1.920e-53
Identity = 81/101 (80.20%), Postives = 93/101 (92.08%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCR Y+A +ALDMGL+NTVVPL +LE ETV WCRE+LQHSP+ALRCLKA+LNAD DGQAGLQELAG+ATMLFYM+EEGQEGRNA+NQKR+PDFGKF + P
Sbjct:  110 FLCRLYDAAEALDMGLVNTVVPLAELERETVRWCREMLQHSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRRPDFGKFRRNP 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A524LSY4_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Calditrichales bacterium TaxID=2528038 RepID=A0A524LSY4_9BACT)

HSP 1 Score: 176 bits (447), Expect = 2.140e-53
Identity = 80/101 (79.21%), Postives = 96/101 (95.05%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            +LCRQYNA+QALDMGL+NTVVPL++LE ETV+WCREIL++SP+A+RCLK++LNAD DGQAGLQELAG+ATMLFYM+EEGQEGRNA+ +KRKPDF KFPK P
Sbjct:  173 YLCRQYNAQQALDMGLVNTVVPLERLEEETVQWCREILENSPLAIRCLKSALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFVEKRKPDFKKFPKRP 273
[Close]
BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Match: A0A7Y2FGA9_9BACT (1,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7Y2FGA9_9BACT)

HSP 1 Score: 176 bits (447), Expect = 2.610e-53
Identity = 81/101 (80.20%), Postives = 94/101 (93.07%), Query Frame = 1 
Query:    1 FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKASLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKLP 303
            FLCRQY+A QALDMGL+NTVVP  +LE ETV+WCREIL HSP+ALRCLKA+LNAD DGQAGLQELAG+AT+LFYM+EEGQEGRNA+N+KRKPDF +FP+LP
Sbjct:  180 FLCRQYDARQALDMGLVNTVVPYAELEAETVKWCREILAHSPMALRCLKAALNADCDGQAGLQELAGNATLLFYMTEEGQEGRNAFNEKRKPDFDRFPRLP 280
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126480.5340.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2J0LHK5_9BACT5.640e-5579.211,4-dihydroxy-2-naphthoyl-CoA synthase (Fragment) ... [more]
C4L9G1_TOLAT1.350e-5482.181,4-dihydroxy-2-naphthoyl-CoA synthase n=3 Tax=Tol... [more]
B4S4J6_PROA23.750e-5479.211,4-dihydroxy-2-naphthoyl-CoA synthase n=11 Tax=Ch... [more]
A0A2G6CZQ5_9PROT4.280e-5480.201,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Pro... [more]
A0A6C8GL67_SALET8.430e-5480.20Naphthoate synthase n=1 Tax=Salmonella enterica su... [more]
A0A496PRK3_9BACT1.070e-5382.181,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=can... [more]
A0A660PZS4_9BACT1.510e-5379.211,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=can... [more]
A0A231MTL4_9GAMM1.920e-5380.201,4-dihydroxy-2-naphthoyl-CoA synthase (Fragment) ... [more]
A0A524LSY4_9BACT2.140e-5379.211,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Cal... [more]
A0A7Y2FGA9_9BACT2.610e-5380.201,4-dihydroxy-2-naphthoyl-CoA synthase n=1 Tax=Gem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126480contigM-pyrifera_M_contig126480:203..508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score180.6
Seed ortholog evalue3.6e-43
Seed eggNOG ortholog595494.Tola_0431
Preferred namemenB
KEGG rclassRC01923
KEGG koko:K01661
KEGG ReactionR07263
KEGG Pathwayko00130,ko01100,ko01110,map00130,map01100,map01110
KEGG ModuleM00116
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0008150,GO:0008152,GO:0008935,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:0071890,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
EggNOG OGs1QTZ2@1224,1T1TZ@1236,1Y3GP@135624,COG0447@1,COG0447@2
Ec32 ortholog descriptionnaphthoate synthase
Ec32 orthologEc-24_003920.1
EC4.1.3.36
COG Functional cat.H
BiGG ReactioniJN678.menB,iYL1228.KPN_02660
Best tax levelAeromonadales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size306
Cds size306
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815779.3111956-CDS-M-pyrifera_M_contig126480:202..5081622815779.3111956-CDS-M-pyrifera_M_contig126480:202..508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126480 203..508 -
1692277565.4782233-CDS-M-pyrifera_M_contig126480:202..5081692277565.4782233-CDS-M-pyrifera_M_contig126480:202..508Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig126480 203..508 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126480.5340.1prot_M-pyrifera_M_contig126480.5340.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig126480 203..508 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig126480.5340.1

>prot_M-pyrifera_M_contig126480.5340.1 ID=prot_M-pyrifera_M_contig126480.5340.1|Name=mRNA_M-pyrifera_M_contig126480.5340.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
FLCRQYNAEQALDMGLINTVVPLDQLEHETVEWCREILQHSPIALRCLKA
SLNADEDGQAGLQELAGHATMLFYMSEEGQEGRNAYNQKRKPDFGKFPKL
P*
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mRNA from alignment at M-pyrifera_M_contig126480:203..508-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig126480.5340.1 ID=mRNA_M-pyrifera_M_contig126480.5340.1|Name=mRNA_M-pyrifera_M_contig126480.5340.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig126480:203..508- (Macrocystis pyrifera P11B4 male)
TTCCTCTGCCGTCAATACAACGCCGAACAAGCCCTCGACATGGGCCTCAT
CAACACCGTCGTTCCGCTCGACCAGCTCGAACATGAAACCGTCGAATGGT
GCCGCGAAATCCTCCAGCATTCGCCCATCGCGTTGCGCTGCCTAAAAGCA
TCCCTCAACGCGGACGAAGACGGCCAAGCCGGACTCCAAGAACTCGCCGG
TCACGCCACGATGCTCTTCTACATGTCGGAAGAAGGCCAAGAAGGCCGAA
ACGCCTACAACCAAAAACGAAAACCAGACTTCGGCAAATTCCCGAAATTG
CCGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig126480:203..508-

>mRNA_M-pyrifera_M_contig126480.5340.1 ID=mRNA_M-pyrifera_M_contig126480.5340.1|Name=mRNA_M-pyrifera_M_contig126480.5340.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig126480:203..508- (Macrocystis pyrifera P11B4 male)
TTCCTCTGCCGTCAATACAACGCCGAACAAGCCCTCGACATGGGCCTCAT
CAACACCGTCGTTCCGCTCGACCAGCTCGAACATGAAACCGTCGAATGGT
GCCGCGAAATCCTCCAGCATTCGCCCATCGCGTTGCGCTGCCTAAAAGCA
TCCCTCAACGCGGACGAAGACGGCCAAGCCGGACTCCAAGAACTCGCCGG
TCACGCCACGATGCTCTTCTACATGTCGGAAGAAGGCCAAGAAGGCCGAA
ACGCCTACAACCAAAAACGAAAACCAGACTTCGGCAAATTCCCGAAATTG
CCGTAGTTCCTCTGCCGTCAATACAACGCCGAACAAGCCCTCGACATGGG
CCTCATCAACACCGTCGTTCCGCTCGACCAGCTCGAACATGAAACCGTCG
AATGGTGCCGCGAAATCCTCCAGCATTCGCCCATCGCGTTGCGCTGCCTA
AAAGCATCCCTCAACGCGGACGAAGACGGCCAAGCCGGACTCCAAGAACT
CGCCGGTCACGCCACGATGCTCTTCTACATGTCGGAAGAAGGCCAAGAAG
GCCGAAACGCCTACAACCAAAAACGAAAACCAGACTTCGGCAAATTCCCG
AAATTGCCGTAG
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