mRNA_M-pyrifera_M_contig12633.5311.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: D7FNL5_ECTSI (Short-chain alcohol dehydrogenase-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNL5_ECTSI) HSP 1 Score: 330 bits (847), Expect = 9.670e-110 Identity = 169/199 (84.92%), Postives = 178/199 (89.45%), Query Frame = 1
Query: 1 RRKTTPDASALFDNNPNIQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
RRK TPDAS+LFDNNPNI VVDGVDV DEGAG LV ALE G+PKVDVLINNAG+M R RN LDI VLRESMEVNAYGA+RIT+ LL KR+LA+PGAKI+LITSKMGSMADNSSGGAY YRMSKAALNAAGVSLAHDLK DGMAVAILHPGWVRT MTGDSGLVD +ESVAGMT RIEEL L NSGTFWGFKGDVIPW
Sbjct: 40 RRKATPDASSLFDNNPNIHVVDGVDVTMDEGAGCLVSALEKAGSPKVDVLINNAGVMKRDRNTLDIGVLRESMEVNAYGALRITNTLLGKRMLAAPGAKIILITSKMGSMADNSSGGAYGYRMSKAALNAAGVSLAHDLKGDGMAVAILHPGWVRTRMTGDSGLVDTHESVAGMTDRIEELDLSNSGTFWGFKGDVIPW 238
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A7Z9G4R6_9DELT (SDR family oxidoreductase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Z9G4R6_9DELT) HSP 1 Score: 197 bits (501), Expect = 7.480e-58 Identity = 113/199 (56.78%), Postives = 144/199 (72.36%), Query Frame = 1
Query: 4 RKTTPDASALFDNNPNIQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSR-SRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
RK++PD +L ++ V GVDV+ DE L L G+ ++D+LINNAGI+ R S LD+D + E +VN+ G +R+T A LR R+ S GAK+ +I+S+MGS+ADNSSG Y YRMSKAA+N AGVSLA DLK G+AVAILHPGWVRT MTG++GLVDA ES AG+ ARIEELTL NSGTFW G+++PW
Sbjct: 33 RKSSPDLDSL-----KLRTVCGVDVSSDEAVQMLDAEL---GDTQLDLLINNAGILRRESLEELDMDSMLEQFKVNSLGPLRVT-ATLRHRM--SAGAKVAIISSRMGSIADNSSGSRYGYRMSKAAVNIAGVSLARDLKPQGIAVAILHPGWVRTDMTGNTGLVDAKESAAGLIARIEELTLENSGTFWHMNGEILPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A7S2V6A8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6A8_9STRA) HSP 1 Score: 183 bits (464), Expect = 8.160e-52 Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 1
Query: 40 NNPNIQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSRNALDIDVLRESM---EVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIE-ELTLGNSGTFWGFKGDVIPW 597
N PN ++++G+DV D +L LE + + KVD+LINNAG +R ++LD V +++ EVNA G +R+T L +RLL SPG K+ LITS+MGSM DN+SGG YAYRMSKAALNAAGVSLA DLK G++VAILHPGWVRTAMT GL+ ESV+GM +E EL L SGT+W G+V+ W
Sbjct: 73 NLPNTEIIEGIDVTCDASVKKLADFLEQS-DLKVDILINNAGSAARG-DSLDEIVYNDAVKAFEVNAVGPLRVTKQLYDRRLLTSPGCKVGLITSRMGSMKDNTSGGRYAYRMSKAALNAAGVSLAFDLKPLGVSVAILHPGWVRTAMTNFDGLISPKESVSGMVKILEDELDLNTSGTWWHTNGEVLQW 260
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A523MPW3_9GAMM (SDR family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523MPW3_9GAMM) HSP 1 Score: 178 bits (452), Expect = 1.500e-50 Identity = 101/187 (54.01%), Postives = 131/187 (70.05%), Query Frame = 1
Query: 43 NPNIQVVDGVDVAKDEGAGRLVQALENTGNP-KVDVLINNAGIM-SRSRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
+P I + G D+ G ++A T P +D+LINNAGI+ S + LDI+ +R+ EVNA G +R+T +LL GAKIVL+TS+MGS+ADN SGG+Y YRMSKAALNAAG+SLA DL+ G+AVAILHPG+VRT MTG SGL+D ESVAG+ RI+ L L NSG+FW G+++PW
Sbjct: 41 SPGIDIHAGYDITD----GVAIEAFARTVEPGTIDLLINNAGILHGMSLDDLDIESVRQQFEVNALGPLRVTRSLLHA---LKDGAKIVLLTSRMGSIADNDSGGSYGYRMSKAALNAAGMSLARDLRGRGIAVAILHPGYVRTDMTGQSGLLDVDESVAGLLERIDGLNLANSGSFWHSNGELLPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: UPI001688FB54 (SDR family oxidoreductase n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001688FB54) HSP 1 Score: 178 bits (451), Expect = 2.170e-50 Identity = 104/184 (56.52%), Postives = 130/184 (70.65%), Query Frame = 1
Query: 52 IQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSR-SRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTG-DSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
+QV GVD+ D L L GN +DVLINNAGI+ R + LD D +R+ EVNA GA+R+T LL RL A G+K+VLITS+MGS+ADN+SGG+Y YRMSK AL+ AG SLAHDLK+ G+AVA+LHPG V+T MT SG + A SV G+ ARI++LTL NSGTFW G+V+PW
Sbjct: 44 VQVETGVDITDDASVASLSDRL---GNQSIDVLINNAGILQRVTLEDLDFDSIRQQFEVNALGALRVTHTLL-PRLKA--GSKVVLITSRMGSIADNTSGGSYGYRMSKVALSMAGKSLAHDLKSRGIAVAVLHPGLVQTRMTNFTSGGISAETSVKGLLARIDQLTLDNSGTFWHSNGEVLPW 221
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A1H1PEU6_9GAMM (Short-chain dehydrogenase n=1 Tax=Halopseudomonas xinjiangensis TaxID=487184 RepID=A0A1H1PEU6_9GAMM) HSP 1 Score: 177 bits (450), Expect = 2.970e-50 Identity = 97/182 (53.30%), Postives = 129/182 (70.88%), Query Frame = 1
Query: 55 QVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSR-NALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
+V+ G+DV + E +LV+AL G+ ++DVLINNAG++ R ++D D +R+ MEVNAY +R+T ALL L GAKI ITS+MGSMADN SGG Y YR SKAALNA G SLA DLK G+AVA+LHPG+V+T MTG++G + ES G+ ARI+ L+L N+G+FW G+ +PW
Sbjct: 45 RVISGIDVTRQESVAKLVEAL---GSQQIDVLINNAGLLHDERLGSIDFDSIRQQMEVNAYAPLRVTEALLP---LLGQGAKIANITSRMGSMADNDSGGRYGYRASKAALNAFGKSLAMDLKPRGIAVALLHPGYVKTRMTGNTGQLTPEESARGLVARIDALSLENTGSFWHSNGESLPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: UPI001CBCA980 (SDR family oxidoreductase n=1 Tax=Pseudomonas nanhaiensis TaxID=2830842 RepID=UPI001CBCA980) HSP 1 Score: 177 bits (450), Expect = 2.970e-50 Identity = 97/182 (53.30%), Postives = 128/182 (70.33%), Query Frame = 1
Query: 55 QVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSR-NALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
+V+ VDV +DE +LV+AL+ +D+LINNAG++ R +D D +R+ MEVNAY +R+T ALL L GAK+ ITS+MGSMADN SGG Y YR SKAALNA G SLA DLK G+AVA+LHPG+V+T MTG++G + ES AG+ ARI+ LTL N+G+FW G+++PW
Sbjct: 45 RVISSVDVTRDEDVRKLVEALDGE---SIDLLINNAGLLRDERLGTIDFDSIRQQMEVNAYAPLRVTEALLP---LLGQGAKVANITSRMGSMADNDSGGRYGYRASKAALNAFGKSLAMDLKGRGIAVALLHPGYVQTRMTGNTGQMTPEESAAGIAARIDALTLDNTGSFWHSNGELLPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A2E9QWS4_9DELT (Short-chain dehydrogenase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2E9QWS4_9DELT) HSP 1 Score: 177 bits (449), Expect = 4.180e-50 Identity = 97/183 (53.01%), Postives = 126/183 (68.85%), Query Frame = 1
Query: 52 IQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSR-NALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
++VV GVDV+ +L G+ K+D+LINNAGI+ R +D D + + EVN+ G +R+T LL S GAK+ L+TS+MGS+ADN+SG Y YRMSKAALN AGVSLAHDLK ++VAILHPG+VRT MTG G++DA +S AG+ RI+EL L NSGTFW G+V+PW
Sbjct: 44 VRVVTGVDVSDQASLDTFAASL---GDEKIDILINNAGILKRETLEEMDYDTIFKQFEVNSVGPLRVTHTLLPH---LSEGAKVALVTSRMGSIADNTSGSRYGYRMSKAALNMAGVSLAHDLKDRSISVAILHPGFVRTDMTGRQGMIDADQSAAGLIQRIDELNLDNSGTFWHTNGEVLPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A2S9YLA9_9DELT (Uncharacterized protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9YLA9_9DELT) HSP 1 Score: 176 bits (447), Expect = 8.290e-50 Identity = 99/183 (54.10%), Postives = 128/183 (69.95%), Query Frame = 1
Query: 52 IQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSRSR-NALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
++V G+DV E L + L G+ +DVLINNAGI+ S +ALD D +R EVNA G +R+ S+L R RL G+KI ++TS+MGS+ADNSSGG+Y YRMSKAA+N AGVSLAHDL+ +G+AVA+LHPGWV+T MTG +G + A ES G+ ARI+ LTL SG FW G +PW
Sbjct: 44 VRVEAGIDVTDGESLAELDRRL---GDLSIDVLINNAGILQPSTLDALDFDAIRRQFEVNAMGPLRVVSSL-RARL--GSGSKIAIVTSRMGSLADNSSGGSYGYRMSKAAVNMAGVSLAHDLRPEGVAVALLHPGWVQTEMTGGTGHITAQESARGLIARIDALTLETSGGFWHQDGSRLPW 220
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Match: A0A2G6CLS8_9PROT (Short-chain dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2G6CLS8_9PROT) HSP 1 Score: 176 bits (446), Expect = 1.170e-49 Identity = 98/183 (53.55%), Postives = 127/183 (69.40%), Query Frame = 1
Query: 52 IQVVDGVDVAKDEGAGRLVQALENTGNPKVDVLINNAGIMSR-SRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKMGSMADNSSGGAYAYRMSKAALNAAGVSLAHDLKADGMAVAILHPGWVRTAMTGDSGLVDAYESVAGMTARIEELTLGNSGTFWGFKGDVIPW 597
++V GVDV+ EG L + L G ++D+LINNAGI+ R S + + + + E EVN+ G +R+T ALL G+K+ L+TS+MGS+ADN+SG Y YRMSKAALN AGVSLAHDL+ G+AVAILHPG+VRT MT GL+DA ES G+ AR+E LTL SGTFW GD++PW
Sbjct: 44 VRVEAGVDVSAAEGVASLAERL---GATRIDLLINNAGILRRESLDEMSFESMVEQFEVNSLGPLRVTHALLTN---LGEGSKVGLVTSRMGSIADNTSGSRYGYRMSKAALNIAGVSLAHDLRHRGIAVAILHPGFVRTEMTNQQGLIDADESARGLLARLEALTLETSGTFWHQNGDILPW 220 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12633.5311.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12633.5311.1 >prot_M-pyrifera_M_contig12633.5311.1 ID=prot_M-pyrifera_M_contig12633.5311.1|Name=mRNA_M-pyrifera_M_contig12633.5311.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp MSRSRNALDIDVLRESMEVNAYGAVRITSALLRKRLLASPGAKIVLITSKback to top mRNA from alignment at M-pyrifera_M_contig12633:538..2436+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12633.5311.1 ID=mRNA_M-pyrifera_M_contig12633.5311.1|Name=mRNA_M-pyrifera_M_contig12633.5311.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1899bp|location=Sequence derived from alignment at M-pyrifera_M_contig12633:538..2436+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12633:538..2436+ >mRNA_M-pyrifera_M_contig12633.5311.1 ID=mRNA_M-pyrifera_M_contig12633.5311.1|Name=mRNA_M-pyrifera_M_contig12633.5311.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig12633:538..2436+ (Macrocystis pyrifera P11B4 male)back to top |