mRNA_M-pyrifera_M_contig126289.5308.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A6G0X690_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X690_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 2.160e-13 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 1
Query: 19 LGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLGD 309
LG GK+ ARGFVR+W D + V SP+++L +TY+ H D+YRL T D ALG+ +V ST + ++EW +RL D
Sbjct: 51 LGCGKTCFARGFVRAWCQDEQLDVTSPTYLLINTYEPPVDTKRS-----------TLYHLDLYRLESVTATDAQALGLEDVFSTGTSIVEWPDRLQD 136
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A357V0S7_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=3 Tax=Rhodospirillales TaxID=204441 RepID=A0A357V0S7_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 5.100e-12 Identity = 41/102 (40.20%), Postives = 52/102 (50.98%), Query Frame = 1
Query: 1 IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLG 306
I L GLG+GK+V ARGFVR+ +G VPSP+F L YD G D HFD+YRLN P + L I + + ++EW ERLG
Sbjct: 38 IALWGGLGMGKTVIARGFVRALLGPDE-EVPSPTFTLVQPYD---------------GPDATLYHFDLYRLNDP--EEAFELDIEDAFADGISLIEWPERLG 121
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A2M7GJ15_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Rhodospirillales bacterium CG15_BIG_FIL_POST_REV_8_21_14_020_66_15 TaxID=1974092 RepID=A0A2M7GJ15_9PROT) HSP 1 Score: 65.5 bits (158), Expect = 3.970e-11 Identity = 40/102 (39.22%), Postives = 51/102 (50.00%), Query Frame = 1
Query: 1 IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLG 306
I L GLG+GK+V ARGF+R+ G VPSP+F L YD G D HFD+YRLN P + L I + + ++EW ERLG
Sbjct: 38 IALRGGLGMGKTVVARGFIRALAGGGE-DVPSPTFTLVQPYD---------------GADFTVYHFDLYRLNDP--EEAFELDIEDAFADGVSLIEWPERLG 121
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: UPI00190416A5 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE n=1 Tax=Aestuariivirga sp. YIM B02566 TaxID=2800327 RepID=UPI00190416A5) HSP 1 Score: 66.6 bits (161), Expect = 1.200e-10 Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 1
Query: 19 LGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERL 303
LG GK+ AR F+++ GD VPSP+F L TYDAT + H D+YRL+ + +LD LG+ +L+T +++EW ERL
Sbjct: 37 LGAGKTTLARSFIQALAGDE-IEVPSPTFTLVQTYDATR---------------IPVAHVDLYRLS--SAGELDELGLDELLTTHQLIVEWPERL 113
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A2D8YZN1_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2D8YZN1_9PROT) HSP 1 Score: 63.9 bits (154), Expect = 1.550e-10 Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 1
Query: 1 IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLG 306
I L GLG+GK+V ARG VR+ +G VPSP+F L Y+ G D HFD+YRLN P + L I + + ++EW ERLG
Sbjct: 38 IALWGGLGMGKTVIARGIVRALLGTDE-EVPSPTFTLVQPYE---------------GPDYTVFHFDLYRLNDP--EEAYELDIEDAFAEGLSLIEWPERLG 121
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: UPI001648EFD9 (tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE n=3 Tax=unclassified Stappia TaxID=2629676 RepID=UPI001648EFD9) HSP 1 Score: 63.9 bits (154), Expect = 1.070e-9 Identity = 36/94 (38.30%), Postives = 46/94 (48.94%), Query Frame = 1
Query: 19 LGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGER 300
LG GKS AR +R+ D VPSP+F L TY TA + HFD+YRL +LD LG+ VL T + ++EW ER
Sbjct: 55 LGAGKSTFARALLRTLADDPALEVPSPTFTLVQTYPLTA---------------LPVAHFDLYRLEDE--EELDELGLDEVLETGAALIEWPER 131
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A511XQF7_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Acetobacter oeni TaxID=304077 RepID=A0A511XQF7_9PROT) HSP 1 Score: 60.5 bits (145), Expect = 3.510e-9 Identity = 40/103 (38.83%), Postives = 51/103 (49.51%), Query Frame = 1
Query: 1 IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLGD 309
I+L LG GKSV AR F+R D VPSP+F L TYDAT HFD++RL+ P L+ LG + + V++EW ERL D
Sbjct: 31 ILLSGPLGAGKSVFARAFLRELCHDPALDVPSPTFTLVQTYDATISPVA---------------HFDLWRLDGPEA--LEELGWDDARN-GVVLVEWPERLED 115
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A6G6WUE6_9HYPH (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Nordella sp. HKS 07 TaxID=2712222 RepID=A0A6G6WUE6_9HYPH) HSP 1 Score: 62.4 bits (150), Expect = 3.700e-9 Identity = 34/95 (35.79%), Postives = 50/95 (52.63%), Query Frame = 1
Query: 19 LGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERL 303
LG GK+ AR F+++ G+ VPSP+F L TYDAT + H D+YRL + +LD LG+ +L + +++EW ERL
Sbjct: 37 LGAGKTTLARSFIQALAGEE-IEVPSPTFTLVQTYDATR---------------IPVAHVDLYRL--ASAGELDELGLDELLKSHQLIVEWPERL 113
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A0F6YIR7_9DELT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6YIR7_9DELT) HSP 1 Score: 58.5 bits (140), Expect = 1.640e-8 Identity = 33/97 (34.02%), Postives = 47/97 (48.45%), Query Frame = 1
Query: 19 LGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLGD 309
LG GK+ R R R P+ SP+F L H + T+G V H D+YRL+ P +LDALG+P ++ S ++EWG R +
Sbjct: 34 LGAGKTFLVRAIARGLRVPEREPITSPTFTLVH--EITSGR-------------VAITHADLYRLDDP--GELDALGLPEAITRSITIVEWGARFAE 113
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Match: A0A2D9F0F3_9PROT (tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9F0F3_9PROT) HSP 1 Score: 58.2 bits (139), Expect = 2.550e-8 Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 1
Query: 1 IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECGTRMLWGGEDVDCIHFDMYRLNPPTLNDLDALGIPNVLSTSSVVMEWGERLG 306
I L GLG+GKSV ARG +R+ VPSP+F L YDA D HFD+YRL P + L I + + ++EW ERLG
Sbjct: 38 IALRGGLGMGKSVFARGLIRALTAPDE-DVPSPTFTLVQPYDAA---------------DFILYHFDLYRLEDP--EEAFELDIEDAFADGVSLIEWPERLG 121 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126289.5308.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig126289.5308.1 >prot_M-pyrifera_M_contig126289.5308.1 ID=prot_M-pyrifera_M_contig126289.5308.1|Name=mRNA_M-pyrifera_M_contig126289.5308.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp IVLCRGLGVGKSVCARGFVRSWIGDSRFPVPSPSFVLAHTYDATAGEAECback to top mRNA from alignment at M-pyrifera_M_contig126289:20..328- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig126289.5308.1 ID=mRNA_M-pyrifera_M_contig126289.5308.1|Name=mRNA_M-pyrifera_M_contig126289.5308.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig126289:20..328- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig126289:20..328- >mRNA_M-pyrifera_M_contig126289.5308.1 ID=mRNA_M-pyrifera_M_contig126289.5308.1|Name=mRNA_M-pyrifera_M_contig126289.5308.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig126289:20..328- (Macrocystis pyrifera P11B4 male)back to top |