mRNA_M-pyrifera_M_contig125081.5086.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A0A6I6AC70_9PLAN (Glycoside hydrolase n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AC70_9PLAN) HSP 1 Score: 355 bits (910), Expect = 2.960e-119 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 1
Query: 1 LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ
Sbjct: 165 LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 335
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A0A517R9R1_9PLAN (GH10 domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517R9R1_9PLAN) HSP 1 Score: 319 bits (817), Expect = 3.360e-105 Identity = 151/171 (88.30%), Postives = 159/171 (92.98%), Query Frame = 1
Query: 1 LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
L ILHQRAQSLKLPVSLGCNLG IP+S E QICQAFDA N DL+NWK IE +EG+QNWD CDQQVDWCEKN+LLIRGGCLLDFAP+GLPDWLESWKLDMVNFQSI+SHFIETAITRYTGSIR WTLVSA+NTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ
Sbjct: 165 LMILHQRAQSLKLPVSLGCNLGEFIPNSQETRQICQAFDAANTDLINWKLIEQFEGDQNWDLCDQQVDWCEKNHLLIRGGCLLDFAPQGLPDWLESWKLDMVNFQSIISHFIETAITRYTGSIRTWTLVSAINTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 335
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A6C1A8_9PLAN (GH10 domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6C1A8_9PLAN) HSP 1 Score: 317 bits (811), Expect = 2.700e-104 Identity = 148/171 (86.55%), Postives = 160/171 (93.57%), Query Frame = 1
Query: 1 LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
LTILHQR+Q++KLPVSLGCNLG IP++SE QICQAFDA N+DLVNWK IE YEG+QNWD CDQQV+WCEK +LLIRGGCLLDFAP GLPDWLESWKLDMVNFQSI+SHFIETAITRYTGSIR WTLVSAMNTGGVFGLNEETRLTLTARAIE+AKQTDDSIQC+IRVEQ
Sbjct: 165 LTILHQRSQTMKLPVSLGCNLGEFIPNASEGKQICQAFDAANIDLVNWKLIEKYEGDQNWDLCDQQVEWCEKKHLLIRGGCLLDFAPHGLPDWLESWKLDMVNFQSIISHFIETAITRYTGSIRTWTLVSAMNTGGVFGLNEETRLTLTARAIEIAKQTDDSIQCYIRVEQ 335
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A0A517W335_9PLAN (Glycosyl hydrolase family 10 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W335_9PLAN) HSP 1 Score: 303 bits (776), Expect = 6.090e-99 Identity = 142/171 (83.04%), Postives = 155/171 (90.64%), Query Frame = 1
Query: 1 LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
L ILHQR+Q++KLPVSLGCNLG IP+ E ICQAFDA N DL+NWK IE EG+QNW+ CDQQVDWCEKN+LLIRGGCLLDFAP GLPDWLESWKLDMVNFQSI+SHFIETAITRY+GSIR WT+VS+MNTGGVFGLNEETRLTLTARAIEVAK+TDDSIQCFIRVEQ
Sbjct: 171 LAILHQRSQAMKLPVSLGCNLGEFIPNKQESQLICQAFDAANTDLINWKLIEPIEGDQNWELCDQQVDWCEKNHLLIRGGCLLDFAPHGLPDWLESWKLDMVNFQSIISHFIETAITRYSGSIRIWTMVSSMNTGGVFGLNEETRLTLTARAIEVAKKTDDSIQCFIRVEQ 341
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A0A2E7CYA3_9PLAN (Glycoside hydrolase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7CYA3_9PLAN) HSP 1 Score: 180 bits (457), Expect = 2.080e-51 Identity = 84/166 (50.60%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 16 QRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
+R +S +LP SLGCNLG +P + +QIC F A ++ V+WK++E EGE W+ D+QVDWC +N +L+RGG LLD +P GLP WL W+ D N QS + ++ETAI+RY G IR W + S +NTGG LNEE RLTL AR +EVA+Q D+ + IRV+Q
Sbjct: 168 RRHRSQQLPASLGCNLGNTVPGNEWPSQICTKFTAASIP-VSWKHVEPAEGEYFWELYDEQVDWCTENKMLMRGGPLLDMSPGGLPAWLSQWEHDFFNLQSFLCDYVETAISRYLGKIRTWEISSRVNTGGALQLNEENRLTLVARTLEVARQVDEEAKLLIRVDQ 332
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: UPI0014218C27 (endo-1,4-beta-xylanase n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014218C27) HSP 1 Score: 168 bits (425), Expect = 9.810e-47 Identity = 82/166 (49.40%), Postives = 106/166 (63.86%), Query Frame = 1
Query: 16 QRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
+RA++ LP SLGC LG P+ AF+A V + W+ IE EG+ WD D QV+WCEKN LL+ G LLD +PEGLPDWL W+ +++N QS VS F+ETAITRY G IR W + + NTGG L+EE RL+L AR +E+A Q D Q +RV+Q
Sbjct: 165 RRARTTHLPASLGCGLGHAPPNPDWEDSFVNAFNAALVP-IEWRFIEPEEGKYEWDTNDAQVEWCEKNRLLMTAGPLLDLSPEGLPDWLWQWQHEVLNLQSFVSDFVETAITRYAGRIRFWEVAARANTGGALALSEEDRLSLAARTLEIASQVDQDNQLMVRVDQ 329
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: UPI00029B433A (endo-1,4-beta-xylanase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029B433A) HSP 1 Score: 167 bits (422), Expect = 2.990e-46 Identity = 78/159 (49.06%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 37 LPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
LP+S+GC + +P + F+ V V WK IE EGE NW+ D+Q+DWCE L++RGG LLD +P WL W+ D++N QS V F+ETAI RY G IR W + S MNTGG GLNEETRLTLTAR ++VA+Q D+ Q IR++Q
Sbjct: 175 LPISIGCEILGTLPPPATHVLYGTLFNTSTVS-VPWKVIEAIEGEYNWEATDKQLDWCESQKLMVRGGPLLDLGSNSMPGWLSRWEHDVLNLQSFVCDFVETAIARYVGRIRVWEICSRMNTGGAMGLNEETRLTLTARVLDVARQVDEEAQLIIRIDQ 332
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: UPI00199301F5 (Endo-1,4-beta-xylanase n=1 Tax=Candidatus Saccharimonas sp. TaxID=1917697 RepID=UPI00199301F5) HSP 1 Score: 165 bits (418), Expect = 1.130e-45 Identity = 74/159 (46.54%), Postives = 101/159 (63.52%), Query Frame = 1
Query: 37 LPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
LP S+GC L P AF++ V V W+ IE EGE +W+ CD+Q++WCE+ L++RGG L+D P+GLP WL W+ D+ N QS V F+ETAI+RY G IR W + + +NTGG L EE RLTL AR ++VA+Q D+ Q IR++Q
Sbjct: 175 LPASIGCELQGSTPKPEANELFAAAFNSATV-AVPWRKIEAVEGEYDWEPCDRQLEWCEQQKLMVRGGPLIDLGPDGLPPWLARWEHDIFNLQSFVCDFVETAISRYVGRIRIWEVAARLNTGGALSLTEENRLTLAARVLDVARQVDEEAQLLIRIDQ 332
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: A0A3L7PE83_9BACT (Glycoside hydrolase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PE83_9BACT) HSP 1 Score: 162 bits (411), Expect = 1.190e-44 Identity = 76/166 (45.78%), Postives = 103/166 (62.05%), Query Frame = 1
Query: 16 QRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
QR Q L P S+GC L IP AF++ V + W IE+ EGE NW+ CD+Q++WCE+ L++RGG LLD P GLP WL W+ D+ N QS V F+ETAI+RY G IR W + + +N+GG L E + LTL AR ++VA+Q D+ Q IR++Q
Sbjct: 170 QRFQGL--PASIGCELQGSIPSPDANELFSAAFNSATVSIP-WNKIEVVEGEYNWEPCDRQLEWCEQQKLMVRGGSLLDLGPGGLPTWLARWEHDIFNLQSFVCDFVETAISRYVGRIRLWEIAARLNSGGALALTEASLLTLAARVLDVARQVDEEAQLLIRIDQ 332
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Match: F0SMP4_RUBBR (Glycoside hydrolase family 10 n=2 Tax=Rubinisphaera TaxID=1649490 RepID=F0SMP4_RUBBR) HSP 1 Score: 160 bits (405), Expect = 8.210e-44 Identity = 76/158 (48.10%), Postives = 105/158 (66.46%), Query Frame = 1
Query: 40 PVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNIELYEGEQNWDQCDQQVDWCEKNNLLIRGGCLLDFAPEGLPDWLESWKLDMVNFQSIVSHFIETAITRYTGSIRNWTLVSAMNTGGVFGLNEETRLTLTARAIEVAKQTDDSIQCFIRVEQ 513
P GC+LG ++P+ F+A V L +WK IE EGE +WD DQQVDW +N ++++GG LL F LP+WLE+WK D++N QS +S ++ETA++RYTG IR W + + MNTGG+FG EE L LTAR I+VA+Q D Q ++RV+Q
Sbjct: 176 PALFGCDLGPVLPNQLPE-NFTDTFNAAAVTL-DWKAIESVEGEYSWDVYDQQVDWALRNKVMVKGGPLLGFQEGDLPNWLENWKHDILNLQSFLSDYVETAVSRYTGKIRMWEVAARMNTGGLFGYTEENLLALTARMIDVARQVDGESQIYVRVDQ 331 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125081.5086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig125081.5086.1 >prot_M-pyrifera_M_contig125081.5086.1 ID=prot_M-pyrifera_M_contig125081.5086.1|Name=mRNA_M-pyrifera_M_contig125081.5086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp LTILHQRAQSLKLPVSLGCNLGTLIPDSSERAQICQAFDAVNVDLVNWKNback to top mRNA from alignment at M-pyrifera_M_contig125081:2..514- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig125081.5086.1 ID=mRNA_M-pyrifera_M_contig125081.5086.1|Name=mRNA_M-pyrifera_M_contig125081.5086.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig125081:2..514- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig125081:2..514- >mRNA_M-pyrifera_M_contig125081.5086.1 ID=mRNA_M-pyrifera_M_contig125081.5086.1|Name=mRNA_M-pyrifera_M_contig125081.5086.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig125081:2..514- (Macrocystis pyrifera P11B4 male)back to top |