mRNA_M-pyrifera_M_contig124178.4920.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A2P6NLR2_9EUKA (Importin N-terminal domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NLR2_9EUKA) HSP 1 Score: 95.9 bits (237), Expect = 4.550e-20 Identity = 57/160 (35.62%), Postives = 96/160 (60.00%), Query Frame = 1
Query: 1 VRVSDQDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFL-AGPF----AEMYYKMALRAFTAKTSESVQLSACELLECV 465
+++ +++N + SA+ LECL AIQT+L +I + E P+ VL P++ +L P+ ++FE+ +K++TF+TYF+ I ++ L P+ + D++ +L LDN +S+S + FL AGP+ +EMY K+ L SES L AC+L+E V
Sbjct: 602 IKICNENNDEDDSAITALECLGAIQTILEAISGRPELYPPIEEVLYPLLQVTLQPDLADFFEEGVKIITFITYFSNEISPRMWSLFPVLHDRFQE-CSDFIQDILNPLDNYISRSTETFLTAGPYLPMVSEMYKKLILNT---DESESNCLDACKLIEAV 757
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: L8GGA7_ACACA (Importin beta domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GGA7_ACACA) HSP 1 Score: 84.0 bits (206), Expect = 6.650e-16 Identity = 44/136 (32.35%), Postives = 80/136 (58.82%), Query Frame = 1
Query: 1 VRVSDQDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLAGPFAEMYYKMALRAF 408
VR++ D ++++A+ ECL AI+T+L SI K + V +L+P++ R L + +E+ E+ LK++ ++T++ I ++QL P+ + + WA D++ ++ LDN +S+ D FLA P Y KM L +
Sbjct: 578 VRLASADEEDDAAAMAATECLGAIETILDSITKTPDLFPQVEPLLVPLLVRLLDDDAMEFMEETLKIMAYLTFYGRGISPAMWQLFPLLYKAFDGWATDWMDQIIIPLDNYISRGNDVFLANPD---YLKMVLSMY 710
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A2G5CXA2_AQUCA (Importin N-terminal domain-containing protein n=4 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CXA2_AQUCA) HSP 1 Score: 82.0 bits (201), Expect = 3.120e-15 Identity = 41/115 (35.65%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 19 DNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLA 363
D G++ AL + CL+AI T+L S+ K + + LLP++ R L+ + E FE++L++V++MT+F+ +I +++ L P+ ++ + WA D+ P++L LDN +S+S FLA
Sbjct: 601 DEGDDPGALAAVGCLRAISTILESVSKLPNLFLEIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLDMWSLWPLMMEALADWAIDFFPNILVPLDNYISRSTAHFLA 715
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A830CWV7_9LAMI (Importin beta-like sad2 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CWV7_9LAMI) HSP 1 Score: 81.6 bits (200), Expect = 4.250e-15 Identity = 41/114 (35.96%), Postives = 75/114 (65.79%), Query Frame = 1
Query: 19 DNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFL 360
+ G++ AL + CL+AI T+L S+ + + V V LLP+++R L+ + E FE++L++V++MT+F+ +I E++ L P+ ++ + WA D+ P++L LDN +S+S FL
Sbjct: 541 EEGDDPGALAAVGCLRAISTILESVSRLPDLFVHVEPTLLPIMSRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRSTAHFL 654
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A2Z7B626_9LAMI (Putative importin-7 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B626_9LAMI) HSP 1 Score: 81.6 bits (200), Expect = 4.260e-15 Identity = 42/114 (36.84%), Postives = 73/114 (64.04%), Query Frame = 1
Query: 19 DNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFL 360
D G++ AL + CL+AI T+L SI + V + LLP++ R L+ + E FE++L++V++MT+F+ +I E++ L P+ ++ + WA D+ P++L LDN +S+S FL
Sbjct: 601 DEGDDPGALAAVGCLRAISTILESISRLPHLFVHIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRSTAHFL 714
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A200R7Z3_9MAGN (Importin-beta n=1 Tax=Macleaya cordata TaxID=56857 RepID=A0A200R7Z3_9MAGN) HSP 1 Score: 81.6 bits (200), Expect = 4.260e-15 Identity = 47/156 (30.13%), Postives = 90/156 (57.69%), Query Frame = 1
Query: 10 SDQDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLA---GPFAEMYYKMALRAFTAKTSESVQLS-ACELLECV 465
+D D ++S AL + CL+AI T+L S+ + + + + LLP++ R L+ + E +E++L++V++MT+F+ +I +++ L P+ ++ + WA D+ P++L LDN +S+S FL + + + M T K E + A +L+E V
Sbjct: 599 ADDDEADDSGALAAVGCLRAISTILESVSRLPDYFIKIEPTLLPIMRRMLTSDGQEVYEEVLEIVSYMTFFSPTISLDMWSLWPLMMEALGEWAIDFFPNILVPLDNYISRSTAHFLTCKDPDYQQSLWNMLSSVMTDKNMEDNDIEPAPKLIEVV 754
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: W1PWV1_AMBTC (Importin N-terminal domain-containing protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1PWV1_AMBTC) HSP 1 Score: 80.9 bits (198), Expect = 7.890e-15 Identity = 50/156 (32.05%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 10 SDQDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLA---GPFAEMYYKMALRAFTAKTSESVQLS-ACELLECV 465
+D+D G+ES AL + CL+AI T+L S+ + V +LLP++ R L+ + E FE++L++V++MT+F+ +I +++ L P+ ++ ++ WA D+ ++L LDN +S+S FL + + +KM K E + A +L+E V
Sbjct: 601 ADED-GDESGALAAVGCLRAISTILESVSRLPHLFPQVEPILLPIMQRMLTTDGQEVFEEVLEIVSYMTFFSPTISLDMWSLWPLMMEALDDWAVDFFENILVPLDNYISRSTAHFLTCKDPDYQQSLWKMLSSVMADKNMEDHDIEPAPKLIEAV 755
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A2K2BN81_POPTR (Importin N-terminal domain-containing protein n=8 Tax=Saliceae TaxID=238069 RepID=A0A2K2BN81_POPTR) HSP 1 Score: 80.9 bits (198), Expect = 7.890e-15 Identity = 44/127 (34.65%), Postives = 78/127 (61.42%), Query Frame = 1
Query: 19 DNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLAGPFAEMYYKMAL 399
D ++ AL + CL+AI T+L S+ + + V V LLP++ R L+ + E FE++L++V++MT+F+ I E++ L P+ ++ + WA D+ P++L LDN +S+ FLA E+ Y+ +L
Sbjct: 601 DEADDPGALAAVGCLRAISTILESVSRLPDLFVQVEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPIISTEMWSLWPLMIEALAEWAIDFFPNILVPLDNYISRGTAHFLA--CRELDYQQSL 725
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: UPI001CC41084 (importin beta-like SAD2 isoform X1 n=3 Tax=Proteaceae TaxID=4328 RepID=UPI001CC41084) HSP 1 Score: 80.5 bits (197), Expect = 1.080e-14 Identity = 40/114 (35.09%), Postives = 72/114 (63.16%), Query Frame = 1
Query: 19 DNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFL 360
D ++ AL + CL+AI T+L S+ + V + LLP++ R L+ + E FE++L++V++MT+F+ +I E++ L P+ + + WA D+ P++L LDN +S+S + FL
Sbjct: 602 DEADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTSDGQEIFEEVLEIVSYMTFFSPTISMEMWSLWPVMTEALTDWAIDFFPNILVPLDNYISRSTEHFL 715
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Match: A0A803Q5R9_CANSA (Importin N-terminal domain-containing protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803Q5R9_CANSA) HSP 1 Score: 80.5 bits (197), Expect = 1.080e-14 Identity = 40/116 (34.48%), Postives = 75/116 (64.66%), Query Frame = 1
Query: 16 QDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIARSLSPNYLEYFEDILKVVTFMTYFTESIPNEVFQLIPIYLQNVETWAQDYLPHMLPSLDNLVSKSKDFFLA 363
+++ ++S AL + CL+AI T+L S+ + V V LLP++ R L+ + E FE++L++V++MT+F+ +I +++ L P+ ++ + WA D+ P++L LDN +S+ FLA
Sbjct: 601 EEDADDSGALAAVGCLRAISTILESVSRLPHLFVQVEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLDMWSLWPLMMEALNDWAIDFFPNILVPLDNYISRGTAHFLA 716 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124178.4920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124178.4920.1 >prot_M-pyrifera_M_contig124178.4920.1 ID=prot_M-pyrifera_M_contig124178.4920.1|Name=mRNA_M-pyrifera_M_contig124178.4920.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp VRVSDQDNGNESSALVGLECLKAIQTVLVSIRKKTEALVPVIHVLLPMIAback to top mRNA from alignment at M-pyrifera_M_contig124178:3..519- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124178.4920.1 ID=mRNA_M-pyrifera_M_contig124178.4920.1|Name=mRNA_M-pyrifera_M_contig124178.4920.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=517bp|location=Sequence derived from alignment at M-pyrifera_M_contig124178:3..519- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124178:3..519- >mRNA_M-pyrifera_M_contig124178.4920.1 ID=mRNA_M-pyrifera_M_contig124178.4920.1|Name=mRNA_M-pyrifera_M_contig124178.4920.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=930bp|location=Sequence derived from alignment at M-pyrifera_M_contig124178:3..519- (Macrocystis pyrifera P11B4 male)back to top |