mRNA_M-pyrifera_M_contig124022.4902.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A849E7A9_9HYPH (MFS transporter (Fragment) n=1 Tax=Anderseniella sp. TaxID=1872568 RepID=A0A849E7A9_9HYPH) HSP 1 Score: 158 bits (399), Expect = 1.150e-43 Identity = 89/174 (51.15%), Postives = 115/174 (66.09%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAI-ADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY+ID GWRMAF +PG FS+ G+ YF LRH AI D S+ F+ + LL+R+ +IVF+TT + +I+FQST+F+LPKIFDER+QG A W Q +GQ D+ATM+G LAFIVF AS Q+IVG LD+YGPR VFM +A +QLV F+L
Sbjct: 146 ALITGYLIDNGGWRMAFVLPGIFSIAIGLAYFALRHDAIRTDRVTSKPVGQFSTAAPSPA------NRTLLVRVSAIVFLTTAVSSIIFQSTTFALPKIFDERLQGLASQLSVWTQRVGETGQGDMATMVGSLAFIVFAAASIAQVIVGSMLDRYGPRLVFMTVAIMQLVFFSL 313
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A848W7B1_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W7B1_9PROT) HSP 1 Score: 149 bits (377), Expect = 3.100e-40 Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAI-ADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY+ID GWR+A+ +PG FS+ G +Y LR ++I AD T + A + + + LL+R+ +IVF+TT + +I+FQSTSF+LPKIFDER+QG W + QADVAT +G+LAF VF +AS QLIVG LD+YGPR +FM +A++Q+V F L
Sbjct: 146 ALITGYLIDHGGWRVAYILPGIFSIIVGFIYIALRWESIIADRTGPK------AVQVTAPGHDTVDHRRLLVRVSAIVFLTTAVSSIIFQSTSFALPKIFDERLQGLVAQLSSWAEGVADPSQADVATTVGILAFTVFAVASMAQLIVGSMLDRYGPRTIFMLMASMQVVFFLL 313
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: UPI001BAA94AA (MFS transporter n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAA94AA) HSP 1 Score: 149 bits (376), Expect = 4.040e-40 Identity = 84/173 (48.55%), Postives = 111/173 (64.16%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY ID GWR AF +PG S+ G++Y + Q I P+ AA +A LL+RI +IVF+TT + +I+FQST+F+LPKIFDER+QG A+ DW L+ +ADVATM+G AF VF +AS QL VG+ LD++GPR VF+ AA+QLV FAL
Sbjct: 146 ALVTGYFIDHGGWRAAFVVPGVVSIITGVIYTVTVWQDITRPKTVSTAPATAA------VVDAASHRALLLRISAIVFLTTSVSSIVFQSTTFALPKIFDERLQGTAQALADWLNTSGLTARADVATMVGAFAFTVFAVASMAQLAVGHLLDRHGPRVVFLGAAAMQLVFFAL 312
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A451BG03_9GAMM (Major Facilitator Superfamily protein n=1 Tax=Candidatus Kentron sp. MB TaxID=2138164 RepID=A0A451BG03_9GAMM) HSP 1 Score: 148 bits (374), Expect = 8.090e-40 Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
ALLTGY+ID GWRMAF +PG FS+ G++Y LR Q I D + + R A LL+R+ +IVF+TT + +++FQST+F+LPKIFDER+Q A W Q AT++G LAFIVFT+AS QL+VG LD+YGPR V++ +AA+Q+V F+L
Sbjct: 146 ALLTGYLIDNGGWRMAFIVPGVFSLGMGLIYLALRWQCI-----QADRSAQKVTDNRAELTGAPAHRGLLMRVSAIVFLTTAISSLIFQSTTFALPKIFDERLQNLAATLSAWIDPMIAPDQGSAATIVGGLAFIVFTVASIAQLVVGAMLDRYGPRRVYLVVAAIQIVFFSL 313
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A2E7QIA7_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QIA7_9PROT) HSP 1 Score: 146 bits (369), Expect = 1.080e-39 Identity = 85/183 (46.45%), Postives = 114/183 (62.30%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAI----------ADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY+ID GWRMAF +PG FS+ G Y LR +I AD ++ +PS+ A LLIR+ +IVF+TT + +I+FQ+T+F+LPKIFDER+Q A + W SGQ D+AT+IG LAFIVF +AS QLIVG LD+ GPR VFM +A +Q+V F++
Sbjct: 73 ALITGYLIDNGGWRMAFILPGIFSIATGFAYMSLRWSSIHADRKETKVPADEPRAKPSPSYRA---------------LLIRVSAIVFLTTAVSSIIFQATTFALPKIFDERLQNLASDLSVWTNRIAGSGQGDIATVIGSLAFIVFAVASMAQLIVGSMLDRIGPRLVFMVVATIQIVFFSI 240
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: UPI0010AB0A32 (MFS transporter n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI0010AB0A32) HSP 1 Score: 147 bits (371), Expect = 2.350e-39 Identity = 83/172 (48.26%), Postives = 113/172 (65.70%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAI-ADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCF 513
AL+TG++ID GWRMAF +PG FS+ G+ Y+ LRH AI +D T SR S +E + + IRI +I+F+T + +++FQST+F+LPK+FDERIQG A N W Q + ADVAT IG LAF+VF +AS QL+VG +LD+ G R VFM +A +Q+V F
Sbjct: 146 ALITGFLIDHGGWRMAFILPGIFSIAMGMAYWALRHGAIRSDHTASRTPGSAKTDEL------PISDRGIYIRISAIIFLTIAVSSVIFQSTTFALPKVFDERIQGLAGNVSAWLQGVATADNADVATAIGSLAFLVFAVASMAQLVVGAALDRLGARQVFMIVAFIQIVFF 311
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A2E9Y0S0_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E9Y0S0_9PROT) HSP 1 Score: 146 bits (369), Expect = 4.620e-39 Identity = 80/171 (46.78%), Postives = 108/171 (63.16%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCF 513
AL+ GY+ID GWRMAF IPGCFS+ G Y LR I + P+ + + AL L+R+ IVF TT + +++FQ+T+F+LPKIFDER+QG A W + +GQ DVAT+IG LAFIVF +AS QL+VG LD++GPR VFM ++ +QL+ F
Sbjct: 146 ALIAGYLIDHGGWRMAFIIPGCFSILVGFFYMALRWDGIHAERNATIVPNAGNAAPPSASYRAL-----LLRVSIIVFFTTAVSSVIFQATTFALPKIFDERLQGLAAELSAWMENFAWAGQGDVATVIGSLAFIVFAVASIAQLVVGSMLDRFGPRHVFMVVSTIQLIFF 311
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A2D6T5D6_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T5D6_9PROT) HSP 1 Score: 145 bits (367), Expect = 9.080e-39 Identity = 79/174 (45.40%), Postives = 112/174 (64.37%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAI-ADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+ GY+ID GWR+AF +PG FS+ G+ Y LR +++ D T S+ +T S LL+R+ +IVF+TT + +++FQST+F+LPKIFDER+QG A W + L GQ D AT+IG AFIVF +AS QL+VG LD++GPR VF+ +A +Q++ F L
Sbjct: 146 ALIAGYLIDNGGWRLAFVLPGAFSIALGMAYLALRWESMHVDQTASKAAGGDVGADTTVS------NRALLMRVSAIVFLTTAVSSVIFQSTTFALPKIFDERLQGLAAAMSTWAEXIALPGQGDTATVIGSFAFIVFAVASMAQLVVGSMLDRFGPRQVFLTVAVIQIIFFTL 313
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A840N4F4_9BRAD (MFS family permease n=1 Tax=Afipia massiliensis TaxID=211460 RepID=A0A840N4F4_9BRAD) HSP 1 Score: 144 bits (364), Expect = 2.450e-38 Identity = 83/175 (47.43%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNP-SFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSG-QADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY ID GWRMAF +PG FS+ G++Y HQ ST + P AA + S +AL ++RI +IVF+TT + +++FQST+F+LPKIFDER+QG A W ++ + D+ATM+G FIVF +AS QL+VG LDK GPR VF+ +AA+Q+V FAL
Sbjct: 146 ALITGYFIDNGGWRMAFVVPGVFSIIIGVLY--AAHQWSEVSTAHQKAPVPAAAAPAQSSDMKAL-----ILRISAIVFLTTAVSSLVFQSTTFALPKIFDERLQGIATEMTQWLSASGVTAAKGDIATMVGAFTFIVFAVASLAQLVVGSLLDKLGPRTVFLIVAAIQIVFFAL 313
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Match: A0A2A4R946_9HYPH (MFS transporter n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A4R946_9HYPH) HSP 1 Score: 143 bits (361), Expect = 6.070e-38 Identity = 80/173 (46.24%), Postives = 108/173 (62.43%), Query Frame = 1
Query: 1 ALLTGYMIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNPSFAANETRKSFFEALKQHPLLIRIFSIVFITTILINILFQSTSFSLPKIFDERIQGFAKNSLDWFQLDQLSGQADVATMIGVLAFIVFTIASFGQLIVGYSLDKYGPRAVFMFLAALQLVCFAL 519
AL+TGY+ID GWRMAF +PG FS+ G +Y LR Q+I R P + + E+ L+R+ +IVF+TT + +++FQST+F+LPKIFDER+QG A W SG+ D AT IG LAF VF +AS QL+VG LD+ GPR VFM +A +Q++ F L
Sbjct: 146 ALVTGYLIDNGGWRMAFVLPGFFSIAMGFIYMTLRWQSIHAE---RAEPKPVREKAKSG--ESADYRKQLMRVSAIVFLTTAVSSVIFQSTTFALPKIFDERLQGVAAQLSVWMNTVPGSGEGDAATAIGFLAFTVFAVASMAQLVVGLMLDRVGPRRVFMVVATIQIIFFLL 313 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124022.4902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig124022.4902.1 >prot_M-pyrifera_M_contig124022.4902.1 ID=prot_M-pyrifera_M_contig124022.4902.1|Name=mRNA_M-pyrifera_M_contig124022.4902.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp MIDTTGWRMAFFIPGCFSVFCGIVYFLLRHQAIADSTFSRDNPSFAANETback to top mRNA from alignment at M-pyrifera_M_contig124022:2..520+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig124022.4902.1 ID=mRNA_M-pyrifera_M_contig124022.4902.1|Name=mRNA_M-pyrifera_M_contig124022.4902.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig124022:2..520+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig124022:2..520+ >mRNA_M-pyrifera_M_contig124022.4902.1 ID=mRNA_M-pyrifera_M_contig124022.4902.1|Name=mRNA_M-pyrifera_M_contig124022.4902.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1002bp|location=Sequence derived from alignment at M-pyrifera_M_contig124022:2..520+ (Macrocystis pyrifera P11B4 male)back to top |