mRNA_M-pyrifera_M_contig123951.4890.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123951.4890.1
Unique NamemRNA_M-pyrifera_M_contig123951.4890.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A7Y2IGA7_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2IGA7_9ACTN)

HSP 1 Score: 182 bits (463), Expect = 2.570e-55
Identity = 91/140 (65.00%), Postives = 106/140 (75.71%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAK 420
            PALGMIPI+R GG     AL+AA+ V+ +GGLFGIYPEGTRSRS  LHKGHTGAARLA++TGAPIIPVG++GT EIQPP QS P P R AT++FG PI+  RY     DRA YR++ DE+MFEI  L G  Y D YA AK
Sbjct:   81 PALGMIPIDRRGGEHAASALEAAKSVLQSGGLFGIYPEGTRSRSGKLHKGHTGAARLALETGAPIIPVGLIGTREIQPPDQSLPTPFRKATIKFGTPIDTSRYADRIGDRALYREITDELMFEIQALCGLEYEDTYAGAK 220          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A7Y2DNY1_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DNY1_9ACTN)

HSP 1 Score: 180 bits (456), Expect = 3.040e-54
Identity = 92/140 (65.71%), Postives = 105/140 (75.00%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAK 420
            PALGMIPI+R GG     AL+AA+ +++  GLFGIYPEGTRSRS  LHKGHTGAARLA++TG PIIPVG+VGT EIQPP QS P P +SATVRFG PI+V RY     DR  YRQ+ DE+MFEI  L G  YV  YA AK
Sbjct:   87 PALGMIPIDRRGGEHAASALEAAKSILNHDGLFGIYPEGTRSRSGKLHKGHTGAARLAVETGKPIIPVGLVGTREIQPPDQSLPTPFKSATVRFGRPIDVSRYADRVGDRGVYRQITDELMFEIQALCGLEYVHVYAGAK 226          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A7X6P076_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P076_9ACTN)

HSP 1 Score: 174 bits (442), Expect = 7.420e-52
Identity = 84/138 (60.87%), Postives = 104/138 (75.36%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYAS 414
            PA+GMIPI+R GGS    AL+AA GV+D G LFGIYPEGTRSRS  LHKGHTG ARLA+    PIIPVGI+G++++QPP   +PRP  + T+RFG+PI+V RY    NDR   RQ+ DEVM+ I +L+GQ YVD YA+
Sbjct:   83 PAMGMIPIDRSGGSAAEGALNAAAGVLDRGELFGIYPEGTRSRSGKLHKGHTGVARLALRCNVPIIPVGIIGSVDVQPPDAKFPRPFMNVTIRFGKPIDVSRYADRANDRMVLRQITDEVMYSIRDLSGQEYVDTYAT 220          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: UPI001E4BEFCC (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E4BEFCC)

HSP 1 Score: 172 bits (437), Expect = 1.470e-51
Identity = 88/138 (63.77%), Postives = 103/138 (74.64%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYAS 414
            PALGMIPI+RGGGS    ALD A  ++D+G LFGIYPEGTRSR   LHKGHTGAARLA+ TG PIIPVG+ GTLE+QPP  S P+P R+  VR G P++V RY    +DR   RQ+ DEVMFEI EL+ Q YVD YA+
Sbjct:   82 PALGMIPIDRGGGSAAERALDKAAELLDSGELFGIYPEGTRSRDGLLHKGHTGAARLAMRTGCPIIPVGLQGTLEVQPPDCSLPKPFRTLRVRVGRPVDVTRYLDRADDRIVLRQITDEVMFEIRELSAQRYVDTYAT 219          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A431IPU5_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A431IPU5_9ACTN)

HSP 1 Score: 174 bits (442), Expect = 1.400e-50
Identity = 83/143 (58.04%), Postives = 104/143 (72.73%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAKDRP 429
            PA+GMIPI+R GG     ALDAA G ++AG LFGIYPEGTR+R   LHKGHTG ARLA+ TG+PI+PVGI+G+ ++QPP   +P P R   +RFG PI V RY+   NDR   RQ++DEVM+EI  L+GQ YVD YA+   +P
Sbjct:  158 PAMGMIPIDRSGGDSATAALDAAAGCLEAGELFGIYPEGTRARDGLLHKGHTGVARLALRTGSPIVPVGIIGSDQVQPPDAKFPAPFRRVHIRFGRPISVERYQDRANDRMVLRQIVDEVMYEIRNLSGQTYVDSYATKPSKP 300          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A3N5KJ50_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KJ50_9ACTN)

HSP 1 Score: 169 bits (429), Expect = 2.050e-50
Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAK 420
            PA+GMIPI+R GG   + AL AA   +  G LFGI+PEGTRSR  HLHKGHTGAARLA+ TG PI PVG+VGT +IQPP    P+   SA +R G+PI+V RY+    D   YR+L DE+M+EI ELTGQ Y+DRYA+ K
Sbjct:   71 PAMGMIPIDRSGGRSSDAALQAASSALARGHLFGIFPEGTRSRDGHLHKGHTGAARLALATGCPIFPVGVVGTADIQPPDAKVPKLFGSAQIRIGQPIDVARYKGRDGDHLVYRELTDELMYEIRELTGQHYIDRYATKK 210          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: UPI001D11E59C (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D11E59C)

HSP 1 Score: 172 bits (435), Expect = 3.550e-50
Identity = 82/138 (59.42%), Postives = 102/138 (73.91%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYAS 414
            PA+GMIPI+R GG     ALDAA G ++AG LFGIYPEGTR+R   LHKGHTG ARLA+ TG PI+PVGI+G+ E+QPP   +P+P R   +RFG PI+V RY    +DR   RQ++DEVM+EI  L+GQ YVD YA+
Sbjct:   87 PAMGMIPIDRSGGDAAKAALDAAAGCLEAGELFGIYPEGTRARDGLLHKGHTGVARLALRTGVPIVPVGIIGSDEVQPPDSRYPQPFRRVHIRFGRPIDVERYMDRASDRLVLRQIVDEVMYEIRNLSGQTYVDTYAT 224          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A349BA85_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349BA85_9ACTN)

HSP 1 Score: 169 bits (428), Expect = 1.930e-49
Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAKD 423
            PA+GMIPI+R GGS    ALD A  V++ G LFGIYPEGTRSR   LH+GHTG ARLA+ TGAP+IPVG+ GT  IQP G + P+P RS  V  G PI+V RYR   +DR   RQLIDEVMFEI +L+GQ YVD YA+ +D
Sbjct:   84 PAIGMIPIDREGGSASQRALDTATRVLERGELFGIYPEGTRSRDGRLHRGHTGPARLALRTGAPLIPVGLRGTDRIQPAGAALPQPFRSCQVNIGAPIDVTRYRDRADDRLVLRQLIDEVMFEIRKLSGQEYVDTYANKRD 224          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: R4Z2S1_9ACTN (Putative Phospholipid/glycerol acyltransferase n=2 Tax=Candidatus Microthrix parvicella TaxID=41950 RepID=R4Z2S1_9ACTN)

HSP 1 Score: 169 bits (428), Expect = 5.640e-49
Identity = 85/143 (59.44%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAKDRP 429
            PA+GMIPI+R GG     ALDAA  V+  G LFGIYPEGTRSRS  LHKGHTG ARLA++T +PI+PVG++GTL +QPP   +PRP R   +RFGEPI   RY     DR   RQL DEVM+EI  LTGQ Y D YA+   +P
Sbjct:   87 PAMGMIPIDRRGGEHAQAALDAAADVLRRGELFGIYPEGTRSRSGDLHKGHTGMARLAMETNSPIVPVGLLGTLAVQPPDAKFPRPFRDVLIRFGEPISPDRYSDRLGDRLALRQLTDEVMWEIRRLTGQSYDDTYATKAAKP 229          
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Match: A0A359F7F0_9ACTN (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A359F7F0_9ACTN)

HSP 1 Score: 166 bits (419), Expect = 8.670e-48
Identity = 81/138 (58.70%), Postives = 99/138 (71.74%), Query Frame = 1
Query:    1 PALGMIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGAARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYRSTGNDRARYRQLIDEVMFEIGELTGQIYVDRYAS 414
            PA+GMIPI+R GG     ALD+A  +++AG LFGIYPEGTRSR+  LHKGHTG ARLA+ T  PIIPVGIVG LE+QPP   +P   R   +R+G PI+V RYR   NDR   RQ+ DE+M+EI  L+GQ Y D YA+
Sbjct:   86 PAMGMIPIDRTGGDSAQRALDSAARILEAGELFGIYPEGTRSRTGMLHKGHTGVARLALRTNVPIIPVGIVGALEVQPPDAKFPNLFREVVIRYGTPIDVSRYRDRANDRLVLRQITDELMYEIRNLSGQEYCDTYAT 223          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123951.4890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2IGA7_9ACTN2.570e-5565.001-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7Y2DNY1_9ACTN3.040e-5465.711-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7X6P076_9ACTN7.420e-5260.871-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
UPI001E4BEFCC1.470e-5163.771-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A431IPU5_9ACTN1.400e-5058.041-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A3N5KJ50_9ACTN2.050e-5059.291-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
UPI001D11E59C3.550e-5059.421-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A349BA85_9ACTN1.930e-4961.701-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
R4Z2S1_9ACTN5.640e-4959.44Putative Phospholipid/glycerol acyltransferase n=2... [more]
A0A359F7F0_9ACTN8.670e-4858.701-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123951contigM-pyrifera_M_contig123951:91..519 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score162.9
Seed ortholog evalue1.1e-37
Seed eggNOG ortholog1229780.BN381_50170
KEGG rclassRC00004,RC00037,RC00039
KEGG koko:K00655
KEGG ReactionR02241,R09381
KEGG Pathwayko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Phosphate acyltransferases
EggNOG OGs2GJ6V@201174,3UWK8@52018,COG0204@1,COG0204@2
EC2.3.1.51
COG Functional cat.I
Best tax levelunclassified Actinobacteria (class)
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Exons1
Model size429
Cds size417
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815757.634842-CDS-M-pyrifera_M_contig123951:90..5071622815757.634842-CDS-M-pyrifera_M_contig123951:90..507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123951 91..507 -
1692277555.3252213-CDS-M-pyrifera_M_contig123951:90..5071692277555.3252213-CDS-M-pyrifera_M_contig123951:90..507Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123951 91..507 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815757.6469617-UTR-M-pyrifera_M_contig123951:507..5191622815757.6469617-UTR-M-pyrifera_M_contig123951:507..519Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig123951 508..519 -
1692277555.340545-UTR-M-pyrifera_M_contig123951:507..5191692277555.340545-UTR-M-pyrifera_M_contig123951:507..519Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig123951 508..519 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123951.4890.1prot_M-pyrifera_M_contig123951.4890.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123951 91..507 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123951.4890.1

>prot_M-pyrifera_M_contig123951.4890.1 ID=prot_M-pyrifera_M_contig123951.4890.1|Name=mRNA_M-pyrifera_M_contig123951.4890.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
MIPIERGGGSRVNPALDAAQGVIDAGGLFGIYPEGTRSRSTHLHKGHTGA
ARLAIDTGAPIIPVGIVGTLEIQPPGQSWPRPNRSATVRFGEPIEVGRYR
STGNDRARYRQLIDEVMFEIGELTGQIYVDRYASAKDRP
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mRNA from alignment at M-pyrifera_M_contig123951:91..519-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123951.4890.1 ID=mRNA_M-pyrifera_M_contig123951.4890.1|Name=mRNA_M-pyrifera_M_contig123951.4890.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig123951:91..519- (Macrocystis pyrifera P11B4 male)
CCGGCGCTGGGAATGATCCCGATCGAGCGGGGCGGTGGTAGCAGGGTCAA TCCGGCGCTCGATGCGGCCCAGGGGGTGATCGATGCCGGCGGACTGTTCG GCATCTATCCCGAGGGCACCCGGAGTCGGTCGACCCATCTCCACAAGGGA CACACGGGTGCGGCTCGACTCGCCATCGACACCGGGGCGCCGATCATCCC GGTCGGCATCGTGGGAACGCTCGAGATCCAGCCGCCGGGCCAGTCCTGGC CCCGACCGAATCGCTCCGCAACCGTGCGGTTCGGCGAACCGATCGAGGTC GGGCGATATCGCTCGACCGGCAACGACCGGGCCAGGTACCGGCAGCTGAT CGACGAGGTCATGTTCGAGATCGGCGAATTGACCGGACAGATCTACGTCG ACCGATACGCCTCGGCGAAGGACCGACCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123951:91..519-

>mRNA_M-pyrifera_M_contig123951.4890.1 ID=mRNA_M-pyrifera_M_contig123951.4890.1|Name=mRNA_M-pyrifera_M_contig123951.4890.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig123951:91..519- (Macrocystis pyrifera P11B4 male)
ATGATCCCGATCGAGCGGGGCGGTGGTAGCAGGGTCAATCCGGCGCTCGA
TGCGGCCCAGGGGGTGATCGATGCCGGCGGACTGTTCGGCATCTATCCCG
AGGGCACCCGGAGTCGGTCGACCCATCTCCACAAGGGACACACGGGTGCG
GCTCGACTCGCCATCGACACCGGGGCGCCGATCATCCCGGTCGGCATCGT
GGGAACGCTCGAGATCCAGCCGCCGGGCCAGTCCTGGCCCCGACCGAATC
GCTCCGCAACCGTGCGGTTCGGCGAACCGATCGAGGTCGGGCGATATCGC
TCGACCGGCAACGACCGGGCCAGGTACCGGCAGCTGATCGACGAGGTCAT
GTTCGAGATCGGCGAATTGACCGGACAGATCTACGTCGACCGATACGCCT
CGGCGAAGGACCGACCAATGATCCCGATCGAGCGGGGCGGTGGTAGCAGG
GTCAATCCGGCGCTCGATGCGGCCCAGGGGGTGATCGATGCCGGCGGACT
GTTCGGCATCTATCCCGAGGGCACCCGGAGTCGGTCGACCCATCTCCACA
AGGGACACACGGGTGCGGCTCGACTCGCCATCGACACCGGGGCGCCGATC
ATCCCGGTCGGCATCGTGGGAACGCTCGAGATCCAGCCGCCGGGCCAGTC
CTGGCCCCGACCGAATCGCTCCGCAACCGTGCGGTTCGGCGAACCGATCG
AGGTCGGGCGATATCGCTCGACCGGCAACGACCGGGCCAGGTACCGGCAG
CTGATCGACGAGGTCATGTTCGAGATCGGCGAATTGACCGGACAGATCTA
CGTCGACCGATACGCCTCGGCGAAGGACCGACCA
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