mRNA_M-pyrifera_M_contig123834.4874.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: UPI00191144C3 (PEP-CTERM system TPR-repeat protein PrsT n=3 Tax=Skermanella TaxID=204447 RepID=UPI00191144C3) HSP 1 Score: 63.2 bits (152), Expect = 1.060e-9 Identity = 33/69 (47.83%), Postives = 44/69 (63.77%), Query Frame = 1
Query: 49 SALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAAIKE 255
+ PA D +SQ F++DA+ + A + A+IQLRNALQQD NL AR++LGE LR P +A KE
Sbjct: 39 AGFTPAHADTQRSQGFYQDAIRQYEAGNAGAAVIQLRNALQQDGGNLEARLLLGEMYLRTGDPVSAEKE 107
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: UPI0013012DE9 (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Skermanella pratensis TaxID=2233999 RepID=UPI0013012DE9) HSP 1 Score: 62.0 bits (149), Expect = 2.690e-9 Identity = 36/69 (52.17%), Postives = 42/69 (60.87%), Query Frame = 1
Query: 49 SALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAAIKE 255
+ APA D +SQ F +DAV A A+IQLRNALQQD NNL AR +LGE LR P +A KE
Sbjct: 35 AGFAPAHADPQRSQGFQQDAVRQLEAGDANAALIQLRNALQQDANNLEARQLLGELYLRTGDPVSAEKE 103
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: S6AAG0_SULDS (Putative TPR repeat:Tetratricopeptide TPR 4 n=2 Tax=Sulfuricella TaxID=935200 RepID=S6AAG0_SULDS) HSP 1 Score: 62.0 bits (149), Expect = 2.690e-9 Identity = 32/75 (42.67%), Postives = 47/75 (62.67%), Query Frame = 1
Query: 22 ATFFLLLAVSALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAA 246
A F LL+ S AA +Q+ +F+EDA+ + + + AIIQL+NALQQD N L A ++LG + L + QP +A
Sbjct: 21 ALFALLIGFSGSIKAANKNEQASKFYEDALVRYEKKDFAGAIIQLKNALQQDANMLAAHVLLGRSFLEKGQPNSA 95
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: UPI0018DCC0D5 (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Inhella proteolytica TaxID=2795029 RepID=UPI0018DCC0D5) HSP 1 Score: 60.8 bits (146), Expect = 6.870e-9 Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 34 LLLAVSALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAA 246
LLLA +L PAA Q+ +FEDA+ F A+ A IQL+NALQQD N+LPA++++G+ L + P+ A
Sbjct: 9 LLLATVSL-PAAAQASQAGRYFEDALKRFEAKDLDGATIQLKNALQQDRNHLPAQLLMGKVALANSDPQRA 78
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: A0A512DWI8_9PROT (Uncharacterized protein n=2 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DWI8_9PROT) HSP 1 Score: 60.1 bits (144), Expect = 1.280e-8 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 1
Query: 7 SMVSFATFFLLLAVSALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAAIKE 255
S+++ AT F + PA D QSQ F+++ V ++ + + A+IQLRNA+QQDP NL AR +LG+ LR +A KE
Sbjct: 6 SLIALATCF-----TVFTPAHADTQQSQRFYDEGVQQLQSGNASAAVIQLRNAIQQDPANLKARQLLGQLYLRTGDAVSAEKE 83
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: UPI0019998C5D (PEP-CTERM system TPR-repeat protein PrsT n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019998C5D) HSP 1 Score: 58.9 bits (141), Expect = 3.270e-8 Identity = 32/73 (43.84%), Postives = 52/73 (71.23%), Query Frame = 1
Query: 34 LLLAVSA-LAPA-AIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAA 246
LL+A++A L PA A ++++ ++EDA+ F+ + AI+QL+NALQQ+P L AR++LG+ LR+ +P AA
Sbjct: 10 LLIALTAVLQPALAAPQEEAARYYEDALSRFQQGNMAAAIVQLKNALQQEPGMLAARVLLGKAHLRQGEPAAA 82
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: A0A1J5BB14_9PROT (BTAD domain-containing protein n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1J5BB14_9PROT) HSP 1 Score: 57.8 bits (138), Expect = 8.360e-8 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 34 LLLAVSALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAA 246
LLLA + A +Q+ F+EDA F AIIQL+NALQQDP LPA ++LG+ LR+ +P A
Sbjct: 11 LLLAGAIPTAGAAQPEQASRFYEDAQGRFEKNDVAGAIIQLKNALQQDPKLLPAYVLLGKAHLRKGEPGPA 81
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: A0A0J8GZW7_9ALTE (Uncharacterized protein n=1 Tax=Catenovulum maritimum TaxID=1513271 RepID=A0A0J8GZW7_9ALTE) HSP 1 Score: 57.4 bits (137), Expect = 1.140e-7 Identity = 32/75 (42.67%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 34 LLLAVSALAPAAID-RDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAAIKE 255
L +A+SA AA+ + S E++E+A+ + A+I+L+NALQQD NN+ ARI+LG+ L + EAA+KE
Sbjct: 7 LAIALSATLFAAVAIAETSSEYYENALQFHHKGESKAAVIELKNALQQDYNNVSARILLGKIYLANGEAEAAVKE 81
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: A0A840BVX1_9RHOO (Putative PEP-CTERM system TPR-repeat lipoprotein n=1 Tax=Niveibacterium umoris TaxID=1193620 RepID=A0A840BVX1_9RHOO) HSP 1 Score: 55.8 bits (133), Expect = 3.980e-7 Identity = 30/66 (45.45%), Postives = 43/66 (65.15%), Query Frame = 1
Query: 34 LLLAVSALAPA---AIDRDQSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLL 222
++LA+SAL P A D ++ F+EDA+ + YT A+IQL+NALQQD L A ++LG +LL
Sbjct: 13 MVLALSALLPGLAIAADTAKASRFYEDALARYERRDYTGAVIQLKNALQQDRKMLAAHVLLGRSLL 78
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Match: A0A2E6GIA1_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GIA1_9PROT) HSP 1 Score: 55.5 bits (132), Expect = 5.160e-7 Identity = 29/55 (52.73%), Postives = 38/55 (69.09%), Query Frame = 1
Query: 82 QSQEFFEDAVDYFRAESYTQAIIQLRNALQQDPNNLPARIMLGETLLRENQPEAA 246
+S E++EDA+ F + Y AIIQL+NALQQD NL AR++LG+T LR AA
Sbjct: 36 KSFEYYEDALRLFNNKDYRGAIIQLKNALQQDHRNLSARVLLGDTYLRLGNGAAA 90 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123834.4874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123834.4874.1 >prot_M-pyrifera_M_contig123834.4874.1 ID=prot_M-pyrifera_M_contig123834.4874.1|Name=mRNA_M-pyrifera_M_contig123834.4874.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=85bp MRSMVSFATFFLLLAVSALAPAAIDRDQSQEFFEDAVDYFRAESYTQAIIback to top mRNA from alignment at M-pyrifera_M_contig123834:267..521+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123834.4874.1 ID=mRNA_M-pyrifera_M_contig123834.4874.1|Name=mRNA_M-pyrifera_M_contig123834.4874.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=255bp|location=Sequence derived from alignment at M-pyrifera_M_contig123834:267..521+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123834:267..521+ >mRNA_M-pyrifera_M_contig123834.4874.1 ID=mRNA_M-pyrifera_M_contig123834.4874.1|Name=mRNA_M-pyrifera_M_contig123834.4874.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=510bp|location=Sequence derived from alignment at M-pyrifera_M_contig123834:267..521+ (Macrocystis pyrifera P11B4 male)back to top |