mRNA_M-pyrifera_M_contig123826.4872.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A517W9H0_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517W9H0_9PLAN) HSP 1 Score: 103 bits (256), Expect = 9.910e-26 Identity = 51/55 (92.73%), Postives = 55/55 (100.00%), Query Frame = 1
Query: 1 MSVTVGDAQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDSP 165
MSVTVGDAQNYVILG+TGS+GSELS+RLVKAGHKVMLGGRDQEKLN+LSTELDSP
Sbjct: 1 MSVTVGDAQNYVILGATGSIGSELSQRLVKAGHKVMLGGRDQEKLNRLSTELDSP 55
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A518A3G0_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A3G0_9PLAN) HSP 1 Score: 75.5 bits (184), Expect = 4.260e-15 Identity = 33/55 (60.00%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 1 MSVTVGDAQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDSP 165
+S ++G + YV+LG+TG+VGSE+S+RL +AGH+VMLGGRDQ++L+ LS+ELD+P
Sbjct: 3 ISDSIGQSLGYVVLGATGAVGSEISQRLARAGHRVMLGGRDQQRLDDLSSELDAP 57
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A517WRW4_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WRW4_9PLAN) HSP 1 Score: 72.4 bits (176), Expect = 6.330e-14 Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 1
Query: 19 DAQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDSP 165
+ QN+V+LG+TGSVGS+LSRRL+ AGH V+LGGRD+ KL +L ELD+P
Sbjct: 9 EQQNFVVLGATGSVGSDLSRRLISAGHHVLLGGRDKNKLQELGAELDAP 57
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A517ZQH0_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Symmachiella dynata TaxID=2527995 RepID=A0A517ZQH0_9PLAN) HSP 1 Score: 65.9 bits (159), Expect = 1.720e-11 Identity = 31/44 (70.45%), Postives = 41/44 (93.18%), Query Frame = 1
Query: 31 YVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDS 162
+V+LG+TGS+GSELSRRLV +G +V+LGGR+ EKL+QLSTELD+
Sbjct: 12 FVVLGATGSIGSELSRRLVASGAQVVLGGRNSEKLDQLSTELDA 55
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A518I4X1_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I4X1_9PLAN) HSP 1 Score: 62.8 bits (151), Expect = 2.450e-10 Identity = 29/45 (64.44%), Postives = 40/45 (88.89%), Query Frame = 1
Query: 22 AQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTEL 156
+Q +VILG+TG++GSELSRRLV+AGH+V LGGR+Q++L L+ EL
Sbjct: 10 SQKFVILGATGAIGSELSRRLVQAGHEVFLGGRNQQRLQCLAEEL 54
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A5C6AZW7_9PLAN (3-oxoacyl-[acyl-carrier-protein] reductase FabG n=1 Tax=Symmachiella macrocystis TaxID=2527985 RepID=A0A5C6AZW7_9PLAN) HSP 1 Score: 61.2 bits (147), Expect = 8.980e-10 Identity = 29/44 (65.91%), Postives = 40/44 (90.91%), Query Frame = 1
Query: 31 YVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDS 162
+V+LG+TGSVGSELSRRLV +G +V+LGGR+ EKL++LS EL++
Sbjct: 12 FVVLGATGSVGSELSRRLVASGAQVVLGGRNSEKLDELSAELNA 55
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A6G8PY87_9ACTN (SDR family oxidoreductase n=1 Tax=Rubrobacter marinus TaxID=2653852 RepID=A0A6G8PY87_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 1.680e-8 Identity = 26/44 (59.09%), Postives = 35/44 (79.55%), Query Frame = 1
Query: 31 YVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDS 162
YV+LG+TG +GSELSRRL K G +++LG RD E+L L+ ELD+
Sbjct: 10 YVVLGATGGIGSELSRRLAKGGARLVLGARDGERLRSLAAELDA 53
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: C1F7J8_ACIC5 (Oxidoreductase, short chain dehydrogenase/reductase family n=2 Tax=Acidobacterium capsulatum TaxID=33075 RepID=C1F7J8_ACIC5) HSP 1 Score: 53.5 bits (127), Expect = 5.720e-7 Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 22 AQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTEL 156
A NYVILG+ G +GS L+RRL AGH++ L GRDQ +L L+ E+
Sbjct: 2 ANNYVILGAYGGIGSALTRRLADAGHRLFLVGRDQARLQPLAAEV 46
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A4R1LAS3_9BACT (NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) n=1 Tax=Acidipila rosea TaxID=768535 RepID=A0A4R1LAS3_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 1.100e-6 Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 1
Query: 22 AQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTEL 156
A+NYVILG+ G +GSEL+R+L G ++ML GRD E+L L+ EL
Sbjct: 2 AENYVILGAYGGIGSELARQLAARGSRLMLVGRDSERLGALAKEL 46
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Match: A0A5C6AV21_9BACT (3-alpha-(Or 20-beta)-hydroxysteroid dehydrogenase n=1 Tax=Rhodopirellula pilleata TaxID=2714738 RepID=A0A5C6AV21_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 1.120e-6 Identity = 23/45 (51.11%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 31 YVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTELDSP 165
Y+I+G+ G +GS+L RRL AG++VM+ GR++EKL+ L+ EL P
Sbjct: 8 YIIVGAAGGIGSDLCRRLTAAGNRVMMVGRNEEKLSALAEELGQP 52 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123826.4872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123826.4872.1 >prot_M-pyrifera_M_contig123826.4872.1 ID=prot_M-pyrifera_M_contig123826.4872.1|Name=mRNA_M-pyrifera_M_contig123826.4872.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp MSVTVGDAQNYVILGSTGSVGSELSRRLVKAGHKVMLGGRDQEKLNQLSTback to top mRNA from alignment at M-pyrifera_M_contig123826:356..520+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123826.4872.1 ID=mRNA_M-pyrifera_M_contig123826.4872.1|Name=mRNA_M-pyrifera_M_contig123826.4872.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=165bp|location=Sequence derived from alignment at M-pyrifera_M_contig123826:356..520+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123826:356..520+ >mRNA_M-pyrifera_M_contig123826.4872.1 ID=mRNA_M-pyrifera_M_contig123826.4872.1|Name=mRNA_M-pyrifera_M_contig123826.4872.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig123826:356..520+ (Macrocystis pyrifera P11B4 male)back to top |