mRNA_M-pyrifera_M_contig123796.4866.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123796.4866.1
Unique NamemRNA_M-pyrifera_M_contig123796.4866.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A7S1C6E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C6E3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.200e-33
Identity = 65/121 (53.72%), Postives = 84/121 (69.42%), Query Frame = 1
Query:   13 MMDALASRD-IEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEG---EECSFIKLVDVNRTVVAHGI 363
            M+ AL S D  ++A++DATN+T+KRRSW  S +A    G RVMFLE +C D ++I SNIRE KL SPDY     E A+ DFL RI+HY  +YEPVD+G   E  S+IKL+DV R VVA+ +
Sbjct:    1 MVAALQSPDGPDIAIFDATNTTRKRRSWAESTLATH--GFRVMFLEPLCTDDAIIRSNIREVKLKSPDYIGMNEEDAIRDFLRRIEHYSRVYEPVDDGGDEEHYSYIKLIDVGRRVVANRV 119          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A5N5TI88_9CRUS (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5TI88_9CRUS)

HSP 1 Score: 115 bits (287), Expect = 1.120e-27
Identity = 56/121 (46.28%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEE--CSFIKLVDVNRTVVAH 357
            A+KD+ + L S + +VAV+DATN+T +RR WI +++  +L G ++ ++ES+CND  +IESNIRE KL SPDY     + A+ DF++RI+HY+ IY P+DE +E   SF+K+++    VV H
Sbjct:  135 ALKDVCNWLNSGEGDVAVFDATNTTVERRRWIFNIVVRKL-GFKLFYVESICNDQKIIESNIREVKLSSPDYVGVNPDEAIKDFIQRIEHYKDIYHPLDEEKEEHLSFMKIINTGEKVVVH 254          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: UPI001E673F1E (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 1-like isoform X1 n=4 Tax=Astacidea TaxID=6712 RepID=UPI001E673F1E)

HSP 1 Score: 113 bits (283), Expect = 5.320e-27
Identity = 60/121 (49.59%), Postives = 86/121 (71.07%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEEC--SFIKLVDVNRTVVAH 357
            A++D+ + L S  + VAVYDATNS ++RR  I  +I ER+ G ++ F+ES+CND ++IE+NI E K+ +PDY +   E AV DFL+RI+HYR +YEP+DE +E   SF+K+ D  R VV H
Sbjct:  114 ALQDVCEFLQSGGM-VAVYDATNSNEERRQLIHHVICERM-GYKLFFIESICNDPNIIETNIMECKVTNPDYTNMEKEDAVKDFLKRIEHYRTMYEPLDEDKESQYSFMKIFDAGRRVVVH 232          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A4U1HAC3_9DELT (Fructose-2,6-bisphosphatase n=2 Tax=Polyangium aurulentum TaxID=2567896 RepID=A0A4U1HAC3_9DELT)

HSP 1 Score: 110 bits (274), Expect = 6.210e-26
Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEECSFIKLVDVNRTVVAHGI 363
            A+ DM+D L     EV ++DATNSTK+RR  +      R  G  ++F+ES+CND+SV+E+N+RETKL SPDY D   EAA  DFL+RI HY ++YE +D+  + S+IK++DV R V  + I
Sbjct:  127 ALDDMIDWLQDGG-EVGIFDATNSTKERRKVVEERT--RKAGVPLVFIESLCNDASVVEANVRETKLSSPDYTDMDPEAATRDFLQRIAHYESMYETLDDPGQ-SYIKIIDVGRQVTLNRI 243          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: UPI000719C268 (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase-like n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719C268)

HSP 1 Score: 109 bits (272), Expect = 6.380e-26
Identity = 61/123 (49.59%), Postives = 85/123 (69.11%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEEC--SFIKLVDVNRTVVAHGI 363
            AMKDM   L +   EVA++DATN+T++RR  I  ++ E+L G R++F+ES+C+D  VIESNI+E KL SPDY  K  + +V DF+ERI HY A YE +DE E+C  SFIK+ +V    + + I
Sbjct:   98 AMKDMCTWLHNGG-EVAIFDATNTTRERRQMISDVVQEQL-GYRLLFVESVCDDPLVIESNIKEVKLSSPDYKGKDPDESVRDFMERIRHYAAQYEQIDEHEDCEYSFIKIYNVGEKFLVNRI 218          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A7M7MR56_APIME (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 1 isoform X2 n=36 Tax=Hymenoptera TaxID=7399 RepID=A0A7M7MR56_APIME)

HSP 1 Score: 109 bits (272), Expect = 1.060e-25
Identity = 55/121 (45.45%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEEC--SFIKLVDVNRTVVAH 357
            A+KD+   L S D EVAV+DATNST +RR  IR+++ E++ G ++ F+ES+CND  ++E NI E K+ SPDYA+   E  ++DF+ RI+HY+  Y+P+DE +E   SF+K+ +    V+ H
Sbjct:  107 ALKDVCQWLESGDGEVAVFDATNSTIERRQLIRNIVVEKM-GFKLFFVESVCNDPEIVEQNIMEVKVSSPDYANMNKEEVLADFMLRIEHYQEKYQPLDETQESDLSFMKIYNTGEKVLVH 226          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A3R7MSA5_PENVA (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase n=7 Tax=Penaeus TaxID=133894 RepID=A0A3R7MSA5_PENVA)

HSP 1 Score: 109 bits (273), Expect = 1.060e-25
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEEC--SFIKLVDVNRTVVAH 357
            A++D+ + L S  + VAVYDATN+ ++RR  I  +I +R+ G ++ F+ES+CND S+IE+NI E K+ +PDY +   E AV DFL+RI+HYR  YE +DE EE   SF+K+ D  R VV H
Sbjct:   78 ALQDVCEFLQSGGM-VAVYDATNTNRERRELIHHVICQRM-GYKLFFIESICNDPSIIETNIMECKVTNPDYTNMEKEDAVKDFLKRIEHYRISYETLDEDEESQYSFMKIFDAGRRVVVH 196          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A6T6AIQ6_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6AIQ6_9RHOD)

HSP 1 Score: 108 bits (271), Expect = 1.370e-25
Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = 1
Query:   10 DMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPV--DEGEECSFIKLVDVNRTVVAHGI 363
            DM++ L +   EV +YDATNST+ RR  +R+ +     G RV+F ES+C D SVIE+NI +TKL+SPDY DK    AV+DF +RI  Y   YEP+  +E + CSF+K+VD   + + + I
Sbjct:  156 DMIEWLKNEHGEVGIYDATNSTRSRRDLVRTTLENE--GIRVLFTESICTDESVIENNILQTKLFSPDYRDKDPATAVNDFRQRIHMYEKAYEPLGGEESKICSFVKIVDAGESFIVNKI 273          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: UPI000C789281 (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 1-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C789281)

HSP 1 Score: 108 bits (269), Expect = 2.270e-25
Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEE--CSFIKLVDVNRTVVAH 357
            A+ D MD L     +VA++DATN+T++RR  +   I  +  G + MFLES+CN  +++ESN+RE K++SPDY    AE A+SDFLERI HY  IYEP+ E  E   +FIK+ +     V H
Sbjct:   84 ALTDAMDFLRDGGGKVAIFDATNTTRERRKIVYDKIVNQ-NGLKCMFLESICNSDNIVESNVREVKVHSPDYKGVDAEEAISDFLERIKHYEDIYEPISEDSENHFAFIKIFNAGEKYVIH 203          
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Match: A0A8J4YKS1_CHIOP (6-phosphofructo-2-kinase/fructose-2, 6-bisphosphatase 1 n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YKS1_CHIOP)

HSP 1 Score: 108 bits (271), Expect = 2.420e-25
Identity = 59/121 (48.76%), Postives = 84/121 (69.42%), Query Frame = 1
Query:    1 AMKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESMCNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEGEEC--SFIKLVDVNRTVVAH 357
            A++D+ + L +  + VAVYDATN+T +RR  I  +I ER+ G ++ F+ES+CND S+IE+NI E K+ +PDY +   E AV DFL+RI+HYR  YE +DE +E   SF+K+ D  R VV H
Sbjct:  179 ALQDVCEFLQTGGM-VAVYDATNTTIERRQLIHHVICERM-GYKLFFIESLCNDPSIIETNIMECKVTNPDYTNMEKEDAVKDFLKRIEHYRLFYEALDEEKESKYSFMKIFDAGRRVVVH 297          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123796.4866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C6E3_9STRA2.200e-3353.72Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5N5TI88_9CRUS1.120e-2746.286-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
UPI001E673F1E5.320e-2749.596-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
A0A4U1HAC3_9DELT6.210e-2648.76Fructose-2,6-bisphosphatase n=2 Tax=Polyangium aur... [more]
UPI000719C2686.380e-2649.596-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
A0A7M7MR56_APIME1.060e-2545.456-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
A0A3R7MSA5_PENVA1.060e-2548.766-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
A0A6T6AIQ6_9RHOD1.370e-2546.67Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
UPI000C7892812.270e-2546.286-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]
A0A8J4YKS1_CHIOP2.420e-2548.766-phosphofructo-2-kinase/fructose-2, 6-bisphosphat... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123796contigM-pyrifera_M_contig123796:2..466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score110.9
Seed ortholog evalue4.1e-22
Seed eggNOG ortholog132113.XP_003487812.1
KEGG koko:K19029
KEGG Pathwayko00051,ko04152,ko04919,map00051,map04152,map04919
Hectar predicted targeting categoryother localisation
EggNOG free text desc.6-phosphofructo-2-kinase
EggNOG OGs38C8I@33154,3BE9G@33208,3CUJR@33213,3SIFX@50557,41TI3@6656,46E04@7399,COG0406@1,KOG0234@2759
EC2.7.1.105,3.1.3.46
COG Functional cat.G
Best tax levelHymenoptera
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size363
Cds size360
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123796.4866.1prot_M-pyrifera_M_contig123796.4866.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123796 2..463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815756.4100573-CDS-M-pyrifera_M_contig123796:1..2831622815756.4100573-CDS-M-pyrifera_M_contig123796:1..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123796 2..283 -
1692277554.7113755-CDS-M-pyrifera_M_contig123796:1..2831692277554.7113755-CDS-M-pyrifera_M_contig123796:1..283Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123796 2..283 -
1622815756.4248524-CDS-M-pyrifera_M_contig123796:385..4631622815756.4248524-CDS-M-pyrifera_M_contig123796:385..463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123796 386..463 -
1692277554.723335-CDS-M-pyrifera_M_contig123796:385..4631692277554.723335-CDS-M-pyrifera_M_contig123796:385..463Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123796 386..463 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815756.4356232-UTR-M-pyrifera_M_contig123796:463..4661622815756.4356232-UTR-M-pyrifera_M_contig123796:463..466Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig123796 464..466 -
1692277554.731156-UTR-M-pyrifera_M_contig123796:463..4661692277554.731156-UTR-M-pyrifera_M_contig123796:463..466Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig123796 464..466 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123796.4866.1

>prot_M-pyrifera_M_contig123796.4866.1 ID=prot_M-pyrifera_M_contig123796.4866.1|Name=mRNA_M-pyrifera_M_contig123796.4866.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=120bp
MKDMMDALASRDIEVAVYDATNSTKKRRSWIRSMIAERLPGTRVMFLESM
CNDSSVIESNIRETKLYSPDYADKTAEAAVSDFLERIDHYRAIYEPVDEG
EECSFIKLVDVNRTVVAHGI
back to top

mRNA from alignment at M-pyrifera_M_contig123796:2..466-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123796.4866.1 ID=mRNA_M-pyrifera_M_contig123796.4866.1|Name=mRNA_M-pyrifera_M_contig123796.4866.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=465bp|location=Sequence derived from alignment at M-pyrifera_M_contig123796:2..466- (Macrocystis pyrifera P11B4 male)
GCTATGAAGGATATGATGGATGCGCTGGCGTCCCGAGATATCGAAGTGGC GGTGTATGATGCCACCAACTCAACGAAGAAGGTAAGGAGGGTGGGAAGAA GGGTGCGGGGGAGAGGTGGGGCACATACGCACACACACACACACACACAC ACACACGCGCGCGCGCGCGCGCGCGCTTCGCAGCGTCGCTCCTGGATCCG CTCCATGATTGCGGAGCGGCTGCCAGGCACACGCGTCATGTTCCTGGAGA GCATGTGCAACGACTCGTCGGTGATCGAGAGCAACATCCGGGAGACTAAG CTGTACTCGCCGGACTACGCGGACAAGACCGCGGAGGCGGCGGTGAGCGA TTTCCTGGAGCGCATTGACCACTACAGGGCGATCTACGAGCCGGTGGACG AGGGGGAGGAATGCAGCTTCATCAAGCTGGTGGACGTGAACCGCACGGTG GTGGCGCACGGCATC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig123796:2..466-

>mRNA_M-pyrifera_M_contig123796.4866.1 ID=mRNA_M-pyrifera_M_contig123796.4866.1|Name=mRNA_M-pyrifera_M_contig123796.4866.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=720bp|location=Sequence derived from alignment at M-pyrifera_M_contig123796:2..466- (Macrocystis pyrifera P11B4 male)
ATGAAGGATATGATGGATGCGCTGGCGTCCCGAGATATCGAAGTGGCGGT
GTATGATGCCACCAACTCAACGAAGAAGATGAAGGATATGATGGATGCGC
TGGCGTCCCGAGATATCGAAGTGGCGGTGTATGATGCCACCAACTCAACG
AAGAAGCGTCGCTCCTGGATCCGCTCCATGATTGCGGAGCGGCTGCCAGG
CACACGCGTCATGTTCCTGGAGAGCATGTGCAACGACTCGTCGGTGATCG
AGAGCAACATCCGGGAGACTAAGCTGTACTCGCCGGACTACGCGGACAAG
ACCGCGGAGGCGGCGGTGAGCGATTTCCTGGAGCGCATTGACCACTACAG
GGCGATCTACGAGCCGGTGGACGAGGGGGAGGAATGCAGCTTCATCAAGC
TGGTGGACGTGAACCGCACGGTGGTGGCGCACGGCATCCGTCGCTCCTGG
ATCCGCTCCATGATTGCGGAGCGGCTGCCAGGCACACGCGTCATGTTCCT
GGAGAGCATGTGCAACGACTCGTCGGTGATCGAGAGCAACATCCGGGAGA
CTAAGCTGTACTCGCCGGACTACGCGGACAAGACCGCGGAGGCGGCGGTG
AGCGATTTCCTGGAGCGCATTGACCACTACAGGGCGATCTACGAGCCGGT
GGACGAGGGGGAGGAATGCAGCTTCATCAAGCTGGTGGACGTGAACCGCA
CGGTGGTGGCGCACGGCATC
back to top