mRNA_M-pyrifera_M_contig123769.4861.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123769.4861.1
Unique NamemRNA_M-pyrifera_M_contig123769.4861.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A1X7TB26_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7TB26_AMPQE)

HSP 1 Score: 74.7 bits (182), Expect = 1.370e-12
Identity = 57/153 (37.25%), Postives = 82/153 (53.59%), Query Frame = 1
Query:   13 DELGRTPLHAAAASCTSPEHTNILKLLVSNGAA-VDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFA-AHFSR---KECILVLAENDASIECVDNRGRTPLHAAA--ASDEMVEKIIASTSNPLHCDKDGRTALHLA 450
            D+ G TPLH+A A     ++  I+KLL++ G A V+  D   RTPLF A+   G ++AV +LL  GA     DK G  P+H A A + R   K   L++ + +A +  VD   RTPL  A    + E V+ ++ + +     DKDG T LH A
Sbjct:  712 DKYGDTPLHSAIARYERNKN-KIVKLLITKGNADVNAVDRNKRTPLFDAVY-YGNIEAVDILLTNGARTNVVDKYGDTPLHSAIARYERNKNKIVKLLITKGNADVNAVDRNKRTPLFDAVYYGNIEAVDILLTNGARTNVVDKDGETLLHCA 862          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: E9GBW6_DAPPU (Uncharacterized protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9GBW6_DAPPU)

HSP 1 Score: 70.9 bits (172), Expect = 2.640e-11
Identity = 50/155 (32.26%), Postives = 80/155 (51.61%), Query Frame = 1
Query:    1 VHAKDELGRTPLHAAAASCTSPEHTNILKLLVSNGAA-VDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAA-HFSRKECILVLAEND-ASIECVDNRGRTPLHAA--AASDEMVEKIIASTSNPLHCDKDGRTALHLA 450
            + A +E G   LH A+      E T+++ +++ +G   ++  DN+G TPL +AI G+      + L+ +GADP   DK G  P+H AA H    E I ++ EN    I  ++  G T LH A  A + EM  +++   ++P   D D   + HLA
Sbjct:  326 ISAVEEKGTNALHLASLFA---ETTDLIDVVLESGKFDINGTDNVGSTPLHYAIMGANWEINTRHLIGKGADPNIADKKGNTPLHLAASHAKAIETISLILENQQVDINHINKGGGTALHHAIIAQNVEMARRMLEKGADPTLRDNDDTNSFHLA 477          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A8B7Y7P4_ACAPL (ankyrin repeat, PH and SEC7 domain containing protein secG-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y7P4_ACAPL)

HSP 1 Score: 68.9 bits (167), Expect = 1.320e-10
Identity = 42/123 (34.15%), Postives = 65/123 (52.85%), Query Frame = 1
Query:    1 VHAKDELGRTPLHAAAASCTSPEHTNILKLLVSNGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPC--AKDKGGCQPMHFAAHFSRKECILVLAENDASIECVDNRGRTPLHAAAA 363
            VH  ++  +T LH  A       +  ++K L+   + ++E DN+GRTPL WAI   GM  +V++LL  G       +DK G  P+H A   +R + + +L   D ++  VD  GRTP   AA+
Sbjct:  200 VHKTNKHKQTVLHLVAGE----GNDELIKYLLDCESKINELDNLGRTPLHWAII-QGMKSSVEILLENGGGKAIDVQDKFGFYPIHCAVQVNRPDIVRLLVHKDCNLSAVDFAGRTPFVYAAS 317          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: UPI000C71AE2B (ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI000C71AE2B)

HSP 1 Score: 67.0 bits (162), Expect = 6.270e-10
Identity = 49/176 (27.84%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   13 DELGRTPLHAAAASCTSPEHTNILKLLVS------NGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKECILVL-------AENDASIECVDNRGRTPLHAA-----AASDEMVEKIIASTSNPLHCDKDGRTALHLAVMGDHTDSFITM 486
            D  G TPLH     C S    N L++  S          +D  DN+GRTPL WA+S  G+    + LL +GADP + ++ G  P+H   + +  + +L +        ++   I+  D  G T LH A      A    V+ ++ + ++P   + +G T LH+    D  D  + +
Sbjct:  350 DSDGSTPLHYI---CNS-HRGNWLRIFFSVTDDMQQTVLIDARDNLGRTPLHWALS-RGLDRVAEFLLRRGADPNSANEEGLTPLHIICNRNYNDDLLGIFFQICGNLQHTVQIDAQDKLGNTSLHLALKLGHCAKKNAVKLLLRNNADPNLVNGEGTTPLHILCQRDEDDGMMAL 520          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A6H5J0W0_9HYME (MYND-type domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5J0W0_9HYME)

HSP 1 Score: 65.1 bits (157), Expect = 3.020e-9
Identity = 52/180 (28.89%), Postives = 80/180 (44.44%), Query Frame = 1
Query:   13 DELGRTPLHAAAASCTSPEHTNI-LKLLVSNG------AAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHF------AAHFSRKECILVLA-------ENDASIECVDNRGRTPLHAAA--ASDEMVEKIIASTSNPLHCDKDGRTALHLAVMGDHTDSFITM 486
            D  G TPLH A   C      +I LK+L  +         +D  DN+GRTPL +A+    + +  +LLL +GAD  + D  G  P+HF       AH +    +  +        +    +   D  G T LH A   +S EMVE ++    +P   + +  T LH+     H+D F+ +
Sbjct:  298 DGEGSTPLHIA---CKCDYGDDIPLKMLFEHSDERFKPIRIDARDNLGRTPLHYAVRAKRIKEVAELLLREGADENSTDIEGLTPLHFICKRNETAHDNEDIDLAKMLFEVCDDMQRTLRVNAQDKLGNTALHYALNWSSKEMVELLLRRGGDPNLANVETLTPLHITCHKYHSDDFVKL 474          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A2V5IIW7_9EURO (Ankyrin n=1 Tax=Aspergillus indologenus CBS 114.80 TaxID=1450541 RepID=A0A2V5IIW7_9EURO)

HSP 1 Score: 64.3 bits (155), Expect = 5.190e-9
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 1
Query:   28 TPLHAAAASCTSPEHTNILK---LLVSNGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKECILVLAENDASIECVDNRGRTPLHAAA-----ASDEMVEKI 387
            TPLHA  A         +++   LL+  GA +D  D  GRTPL  A+    +   +  LL +GA    +D      +H+AA   R E +  L  + AS+ECVD+ GR+PL+ AA      +D++ EK+
Sbjct:  310 TPLHALYAMAHYTLRETLIQTSNLLLDKGANIDRQDYWGRTPLMLALLQDWI--PIDHLLTRGARLDIQDGISATALHYAAQLRRLEDVKQLRLDAASVECVDDGGRSPLYWAALAHENVADDLCEKL 435          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A6H5IYU6_9HYME (Uncharacterized protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5IYU6_9HYME)

HSP 1 Score: 63.2 bits (152), Expect = 1.440e-8
Identity = 46/128 (35.94%), Postives = 64/128 (50.00%), Query Frame = 1
Query:  112 VDEPDNMGRTPLFWAISGS----GMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKEC--------ILVLAENDASIECVDNRGRTPLHAAAASD--EMVEKIIASTSNPLHCDKD-GRTALHLA 450
            VD  DN+GRTPL+ A+S      G++D  +LL+  G DP A D  G   +H AA  S  +         +  L      I+  D RGRTPLH A A    ++ E ++   ++P   D   G TALH+A
Sbjct:  499 VDARDNLGRTPLYLALSKDNFNWGLVD--ELLITGGTDPYAVDAEGSTLLHLAARCSGSDDQADRTASHLFELESWPVPIDARDERGRTPLHLALAHGRKKLAESLLRRGADPHSTDASRGSTALHVA 624          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A6A5DRU9_SCHHA (Putative ank repeat-containing n=1 Tax=Schistosoma haematobium TaxID=6185 RepID=A0A6A5DRU9_SCHHA)

HSP 1 Score: 63.2 bits (152), Expect = 1.470e-8
Identity = 50/141 (35.46%), Postives = 69/141 (48.94%), Query Frame = 1
Query:    1 VHAKDELGRTPLHAAAASCTSPEHTNILKLLVSNGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAA------HFS------RKEC----ILVLAENDASIECVDNRGRTPLHAAAASDEM 375
            V+  D+ GRTP+  +        HT+I++LL+  GAAVD  D  GR+ L  A         V+ LL +G D   KD  GC P+H A        FS      R EC    + +L +  A++E  DN GRTPL  A  ++ M
Sbjct: 1242 VNMADKSGRTPVMLSVLG----GHTDIVRLLLFWGAAVDIMDYAGRSLLSIAAQIKNA-QIVQELLARGLDEAHKDHTGCTPLHLAVDNLITNEFSTENVNNRDECCEEVVRLLLDAGANLEETDNTGRTPLLVACQANNM 1377          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A8C4YXW2_GADMO (Ankyrin repeat domain 16 n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C4YXW2_GADMO)

HSP 1 Score: 62.8 bits (151), Expect = 1.490e-8
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   10 KDELGRTPLHAAAASCTSPEHTNILKLLVSNGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKECILVLAENDASIECVDNRGRTPLHAAA---ASDEMVEKIIA---STSNPLHC-DKDGRTALHLAVMGDHTDSFITM 486
            + ++ RTPLH AA      E  NIL  L   G   +  D+ G TP   A+    +     LL + GA P A DK GCQ +H  A   ++E +  L +    ++   N+  T L   A   A+ E     IA   S    LH  DK GR+ALH+A +G H D+  T+
Sbjct:  173 ESKILRTPLHTAAMHGCE-EVVNIL--LQRCGYISESADSCGVTPFMDAVRNGHIAVGKMLLEIHGASPTASDKLGCQSIHQVAVTGQEEALEFLVKE---LKVDVNQTATVLQLTALHYAAKEGHTGTIATLLSLGADLHVKDKKGRSALHMASIGQHADAARTL 332          
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Match: A0A165KV83_9BURK (Uncharacterized protein n=9 Tax=Acidovorax TaxID=12916 RepID=A0A165KV83_9BURK)

HSP 1 Score: 61.6 bits (148), Expect = 1.650e-8
Identity = 39/95 (41.05%), Postives = 53/95 (55.79%), Query Frame = 1
Query:   13 DELGRTPLHAAAASCTSPEHTNILKLLVSNGAAVDEPDNMGRTPLFWAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKECILVLA 297
            ++ G  PLH AA S  SP+H  I+ LL+ N A +D     G TPL  A +  G ++AV+LLL +GADP  K++ G     FA   SR E    +A
Sbjct:  119 NKTGWAPLHYAA-SAGSPQHAVIISLLLENHAYIDATSPNGTTPLMMA-AHYGSIEAVQLLLDEGADPTLKNQLGLTAADFALRVSRTESAEKIA 211          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123769.4861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1X7TB26_AMPQE1.370e-1237.25Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
E9GBW6_DAPPU2.640e-1132.26Uncharacterized protein n=1 Tax=Daphnia pulex TaxI... [more]
A0A8B7Y7P4_ACAPL1.320e-1034.15ankyrin repeat, PH and SEC7 domain containing prot... [more]
UPI000C71AE2B6.270e-1027.84ankyrin-1-like n=1 Tax=Trichogramma pretiosum TaxI... [more]
A0A6H5J0W0_9HYME3.020e-928.89MYND-type domain-containing protein n=1 Tax=Tricho... [more]
A0A2V5IIW7_9EURO5.190e-934.38Ankyrin n=1 Tax=Aspergillus indologenus CBS 114.80... [more]
A0A6H5IYU6_9HYME1.440e-835.94Uncharacterized protein n=1 Tax=Trichogramma brass... [more]
A0A6A5DRU9_SCHHA1.470e-835.46Putative ank repeat-containing n=1 Tax=Schistosoma... [more]
A0A8C4YXW2_GADMO1.490e-833.73Ankyrin repeat domain 16 n=2 Tax=Gadus morhua TaxI... [more]
A0A165KV83_9BURK1.650e-841.05Uncharacterized protein n=9 Tax=Acidovorax TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123769contigM-pyrifera_M_contig123769:16..501 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score73.6
Seed ortholog evalue9.8e-11
Seed eggNOG ortholog1182553.XP_007747179.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ankyrin repeat protein
EggNOG OGs38BVK@33154,3NW9Q@4751,3QJDH@4890,COG0666@1,KOG4177@2759
COG Functional cat.M
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
Exons1
Model size486
Cds size486
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815756.2113934-CDS-M-pyrifera_M_contig123769:15..5011622815756.2113934-CDS-M-pyrifera_M_contig123769:15..501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123769 16..501 +
1692277554.6318579-CDS-M-pyrifera_M_contig123769:15..5011692277554.6318579-CDS-M-pyrifera_M_contig123769:15..501Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123769 16..501 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123769.4861.1prot_M-pyrifera_M_contig123769.4861.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123769 16..501 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123769.4861.1

>prot_M-pyrifera_M_contig123769.4861.1 ID=prot_M-pyrifera_M_contig123769.4861.1|Name=mRNA_M-pyrifera_M_contig123769.4861.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
VHAKDELGRTPLHAAAASCTSPEHTNILKLLVSNGAAVDEPDNMGRTPLF
WAISGSGMLDAVKLLLVQGADPCAKDKGGCQPMHFAAHFSRKECILVLAE
NDASIECVDNRGRTPLHAAAASDEMVEKIIASTSNPLHCDKDGRTALHLA
VMGDHTDSFITM
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mRNA from alignment at M-pyrifera_M_contig123769:16..501+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123769.4861.1 ID=mRNA_M-pyrifera_M_contig123769.4861.1|Name=mRNA_M-pyrifera_M_contig123769.4861.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=486bp|location=Sequence derived from alignment at M-pyrifera_M_contig123769:16..501+ (Macrocystis pyrifera P11B4 male)
GTCCACGCGAAGGACGAGTTGGGCAGGACGCCCCTCCACGCGGCTGCTGC CAGCTGCACCAGCCCAGAGCACACGAACATCCTCAAGCTGCTGGTCTCCA ACGGGGCTGCAGTGGATGAGCCCGACAACATGGGCAGGACGCCCCTTTTC TGGGCCATCTCTGGCAGTGGCATGCTGGACGCTGTCAAGCTCCTTCTTGT GCAAGGAGCAGACCCTTGTGCCAAGGACAAGGGCGGCTGCCAGCCCATGC ACTTCGCCGCTCACTTCTCGCGCAAGGAGTGCATACTGGTGCTGGCGGAG AACGACGCCTCGATCGAGTGCGTGGACAACAGGGGCCGCACGCCCCTCCA CGCCGCCGCGGCCTCTGACGAAATGGTGGAGAAGATCATCGCCTCCACCT CCAACCCTCTCCACTGCGACAAGGACGGCCGCACGGCCCTCCACCTGGCG GTCATGGGCGACCACACGGACTCCTTCATCACCATG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123769:16..501+

>mRNA_M-pyrifera_M_contig123769.4861.1 ID=mRNA_M-pyrifera_M_contig123769.4861.1|Name=mRNA_M-pyrifera_M_contig123769.4861.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=972bp|location=Sequence derived from alignment at M-pyrifera_M_contig123769:16..501+ (Macrocystis pyrifera P11B4 male)
GTCCACGCGAAGGACGAGTTGGGCAGGACGCCCCTCCACGCGGCTGCTGC
CAGCTGCACCAGCCCAGAGCACACGAACATCCTCAAGCTGCTGGTCTCCA
ACGGGGCTGCAGTGGATGAGCCCGACAACATGGGCAGGACGCCCCTTTTC
TGGGCCATCTCTGGCAGTGGCATGCTGGACGCTGTCAAGCTCCTTCTTGT
GCAAGGAGCAGACCCTTGTGCCAAGGACAAGGGCGGCTGCCAGCCCATGC
ACTTCGCCGCTCACTTCTCGCGCAAGGAGTGCATACTGGTGCTGGCGGAG
AACGACGCCTCGATCGAGTGCGTGGACAACAGGGGCCGCACGCCCCTCCA
CGCCGCCGCGGCCTCTGACGAAATGGTGGAGAAGATCATCGCCTCCACCT
CCAACCCTCTCCACTGCGACAAGGACGGCCGCACGGCCCTCCACCTGGCG
GTCATGGGCGACCACACGGACTCCTTCATCACCATGGTCCACGCGAAGGA
CGAGTTGGGCAGGACGCCCCTCCACGCGGCTGCTGCCAGCTGCACCAGCC
CAGAGCACACGAACATCCTCAAGCTGCTGGTCTCCAACGGGGCTGCAGTG
GATGAGCCCGACAACATGGGCAGGACGCCCCTTTTCTGGGCCATCTCTGG
CAGTGGCATGCTGGACGCTGTCAAGCTCCTTCTTGTGCAAGGAGCAGACC
CTTGTGCCAAGGACAAGGGCGGCTGCCAGCCCATGCACTTCGCCGCTCAC
TTCTCGCGCAAGGAGTGCATACTGGTGCTGGCGGAGAACGACGCCTCGAT
CGAGTGCGTGGACAACAGGGGCCGCACGCCCCTCCACGCCGCCGCGGCCT
CTGACGAAATGGTGGAGAAGATCATCGCCTCCACCTCCAACCCTCTCCAC
TGCGACAAGGACGGCCGCACGGCCCTCCACCTGGCGGTCATGGGCGACCA
CACGGACTCCTTCATCACCATG
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