mRNA_M-pyrifera_M_contig123765.4859.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig123765.4859.1
Unique NamemRNA_M-pyrifera_M_contig123765.4859.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A1V9YHU6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YHU6_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.640e-16
Identity = 47/137 (34.31%), Postives = 72/137 (52.55%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD 411
            Q CPT GDP FD+ +  K  GIP  F++ +  S+ +     +T V+   G +AV  P     TK +  +    AA  +     P  L CP+C  LL++A  +PCC   ACDEC RE ++  +  +CP+C    ++P+
Sbjct:  224 QNCPTNGDPNFDKHKVTKKTGIPKTFMQPIKDSEEVAVGSGITVVNGPQGGLAVIGPQTHNFTKLIGLSGGG-AALEQLRMNPPEHLACPLCKRLLQDAALIPCCNDTACDECIRERLIRHNF-ECPLCHHANMTPE 358          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: T0S7L1_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S7L1_SAPDV)

HSP 1 Score: 83.2 bits (204), Expect = 6.360e-16
Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD 411
            Q CPT GDP FD+ +  K  GIP  F++ +  S+ +     +T V+   G +AV  P     TK +  +    AA  +     P  L CP+C  LL++A  +PCC   ACDEC R+ ++  +  +CP+C    ++P+
Sbjct:  223 QNCPTNGDPNFDKHKVTKKTGIPKTFMQPIKDSEEVAVGAGITVVNGPQGGLAVIGPQTHNFTKLIGLSGGG-AALEQLRMNPPEHLACPLCKRLLQDAALIPCCNDTACDECIRDRLIRHNF-ECPLCHHANMTPE 357          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A067C9J2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C9J2_SAPPC)

HSP 1 Score: 83.2 bits (204), Expect = 6.590e-16
Identity = 46/137 (33.58%), Postives = 72/137 (52.55%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD 411
            Q CPT GDP FD+ +  K  GIP  F++ +  S+ +     +T V+   G +AV  P     TK +  +    AA  +     P  L CP+C  LL++A  +PCC   ACDEC R+ ++  +  +CP+C    ++P+
Sbjct:   88 QNCPTNGDPNFDKHKVTKKTGIPKTFMQPIKDSEEVAVGAGITVVNGPQGGLAVIGPQTHNFTKLIGLSGGG-AALEQLRMNPPEHLACPLCKRLLQDAALIPCCNDTACDECIRDRLIRHNF-ECPLCHHANMTPE 222          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A1V9ZWH9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWH9_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 9.220e-16
Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD 411
            Q CPT GDP FD+ +  K  GIP  F++ +   + +     +T V    G +AV  P     TK +  +    AA  +     P  L C +C  LL++A  +PCC   ACDEC RE ++  +  +CP+C T G++P+
Sbjct:  226 QNCPTNGDPNFDKHKVTKKTGIPKTFMQPIKDPEEVPATSGITVVTGLAGGLAVIGPQTHNFTKLITLSGGG-AALEQLRMNPPDHLACRLCKRLLQDAALIPCCNETACDECIRERLIRHNF-ECPLCHTPGMTPE 360          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A2R6WG78_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WG78_MARPO)

HSP 1 Score: 78.6 bits (192), Expect = 2.790e-14
Identity = 46/129 (35.66%), Postives = 68/129 (52.71%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVC 387
            Q CPT GDP +D  + + P+GIP   LK        D  G+     + DG +AV  P++    K  +A    L +      E PP LRCP+C A+ ++AV +PCC    CD+C R+E++  +  +CP C
Sbjct:  211 QHCPTNGDPTYDIRRVKLPVGIPKTRLKA-------DQEGSYI---LPDGSVAVMQPDESVFAKEADA----LLSIRPTFAEPPPELRCPLCQAIFKDAVMIPCCHYSFCDKCIRQELI--EKGKCPQC 323          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: UPI0019032F1C (DWNN domain-containing protein n=1 Tax=Cantharellus anzutake TaxID=1750568 RepID=UPI0019032F1C)

HSP 1 Score: 69.7 bits (169), Expect = 3.230e-11
Identity = 48/133 (36.09%), Postives = 67/133 (50.38%), Query Frame = 1
Query:    4 ECPTTGDPAFD-RPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPS---LRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCR 390
            +CPT  D  FD RP+ +K  GIP  FLK+V  +      G +   +   G   V  P+ +   K+   T RR        +E PPS   L+CP+C+ L REAV  PCC    C+EC +  +L  D + CP C+
Sbjct:  224 DCPTNDDRDFDNRPRVKKTTGIPRSFLKSVELTGDTPQPGVMITPE---GGFVVAQPDSETWKKQ---TARRPGMTEVELRERPPSDPTLQCPICNKLFREAVKTPCCSKTFCEECVQTHLLERDFS-CPGCQ 349          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A0C3QIQ2_9AGAM (Uncharacterized protein n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QIQ2_9AGAM)

HSP 1 Score: 67.0 bits (162), Expect = 2.850e-10
Identity = 48/143 (33.57%), Postives = 68/143 (47.55%), Query Frame = 1
Query:    1 QECPTTGDPAFD-RPQNRKPLGIPSGFLKTVS-TSDALDTRGALTAVDMG----DGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD 411
            Q+CPT  D  +D RP+ ++  GIP  FLK+V  T+D    +G +   + G    +   A W   Q A  K +   +       R      PSL CP C  LLR+AV  PCC    C+EC    +L     +CP C+++  S D
Sbjct:  226 QDCPTNDDREYDNRPRVKRTTGIPRSFLKSVEVTNDGPIAKGVMVTPEGGFVVAEPDSAAWERQQKAKLKGLTEAE------VRDRTPRDPSLACPQCDKLLRDAVKTPCCQKDYCEECIHTHLLEGSF-ECPNCKSKIPSLD 361          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A0N0RSR4_9BASI (Dwnn-domain-containing protein n=1 Tax=Malassezia pachydermatis TaxID=77020 RepID=A0A0N0RSR4_9BASI)

HSP 1 Score: 66.6 bits (161), Expect = 3.770e-10
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAP--PSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVC 387
            Q+CPT  +P +D  + ++  GIP   LKTV  S A +  G +   D   G   +  P+  +  +R  A  R L+      K  P  PSL CP+CS LLREAV   CC    C+EC +  +   D   CP C
Sbjct:  228 QDCPTNNNPEYDNRRFKRTTGIPKSMLKTVEQSTAENMTGVMVTPD---GSYVIATPDSGSW-QRSRARSRPLSKTD-VYKTVPSDPSLACPLCSKLLREAVKTSCCHTTFCEECIQTHLFEHDFV-CPEC 352          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: A0A0D1CFV9_USTMA (Uncharacterized protein n=1 Tax=Ustilago maydis (strain 521 / FGSC 9021) TaxID=237631 RepID=A0A0D1CFV9_USTMA)

HSP 1 Score: 66.6 bits (161), Expect = 3.890e-10
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query:    1 QECPTTGDPAFD-RPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEIL 357
            Q+CPT  D  +D RP+ ++  GIP   LKTV      D R  +      DG   V   +Q++  K    T+    +    +    PSL CP+CS LLR+AV  PCC  + C+EC +  +L
Sbjct:  241 QDCPTNDDKEYDNRPRFKRTTGIPKSMLKTVEQPTDEDHRAGVMLT--ADGTYVVARVDQESWRKNRVRTKPLTQSDVYQSAPTDPSLACPLCSKLLRDAVVTPCCQTKYCEECIQTHLL 358          
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Match: M5E9M4_MALS4 (Similar to S.cerevisiae protein MPE1 (Essential conserved subunit of CPF cleavage and polyadenylation factor) n=1 Tax=Malassezia sympodialis (strain ATCC 42132) TaxID=1230383 RepID=M5E9M4_MALS4)

HSP 1 Score: 64.7 bits (156), Expect = 1.780e-9
Identity = 44/130 (33.85%), Postives = 63/130 (48.46%), Query Frame = 1
Query:    1 QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDGKMAVWMPNQDAMTKRVNATQRRLAAA-ARAAKEAPPSLRCPVCSALLREAVCLPCCGARACDECAREEILASDTAQCPVC 387
            Q+CPT  +P +D  + ++  GIP   L+TV  S A    G +   D   G   +  P+  +  +R  A  R L+      +  + PSL CP+CS LLREAV   CC    C+EC +  +   D   CP C
Sbjct:  224 QDCPTNDNPEYDNRRFKRTTGIPKSMLRTVEQSTAETMSGVMVTAD---GSYVIATPDASSW-QRSRARSRPLSKTDVYQSVPSDPSLACPLCSKLLREAVKTSCCQTSFCEECVQTYLFEHDFV-CPEC 348          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123765.4859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A1V9YHU6_9STRA2.640e-1634.31Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
T0S7L1_SAPDV6.360e-1633.58Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A067C9J2_SAPPC6.590e-1633.58Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
A0A1V9ZWH9_9STRA9.220e-1634.31Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A2R6WG78_MARPO2.790e-1435.66Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
UPI0019032F1C3.230e-1136.09DWNN domain-containing protein n=1 Tax=Cantharellu... [more]
A0A0C3QIQ2_9AGAM2.850e-1033.57Uncharacterized protein n=1 Tax=Tulasnella calospo... [more]
A0A0N0RSR4_9BASI3.770e-1035.88Dwnn-domain-containing protein n=1 Tax=Malassezia ... [more]
A0A0D1CFV9_USTMA3.890e-1035.00Uncharacterized protein n=1 Tax=Ustilago maydis (s... [more]
M5E9M4_MALS41.780e-933.85Similar to S.cerevisiae protein MPE1 (Essential co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123765contigM-pyrifera_M_contig123765:111..521 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score85.1
Seed ortholog evalue2.8e-14
Seed eggNOG ortholog42099.EPrPV00000013156
KEGG koko:K10624,ko:K15541
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DWNN
EggNOG OGs1MCDB@121069,COG5222@1,KOG0314@2759
EC2.3.2.27
COG Functional cat.O
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko04121
Exons1
Model size411
Cds size411
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815756.1201892-CDS-M-pyrifera_M_contig123765:110..5211622815756.1201892-CDS-M-pyrifera_M_contig123765:110..521Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123765 111..521 +
1692277554.6087096-CDS-M-pyrifera_M_contig123765:110..5211692277554.6087096-CDS-M-pyrifera_M_contig123765:110..521Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig123765 111..521 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123765.4859.1prot_M-pyrifera_M_contig123765.4859.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig123765 111..521 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig123765.4859.1

>prot_M-pyrifera_M_contig123765.4859.1 ID=prot_M-pyrifera_M_contig123765.4859.1|Name=mRNA_M-pyrifera_M_contig123765.4859.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
QECPTTGDPAFDRPQNRKPLGIPSGFLKTVSTSDALDTRGALTAVDMGDG
KMAVWMPNQDAMTKRVNATQRRLAAAARAAKEAPPSLRCPVCSALLREAV
CLPCCGARACDECAREEILASDTAQCPVCRTQGVSPD
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mRNA from alignment at M-pyrifera_M_contig123765:111..521+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig123765.4859.1 ID=mRNA_M-pyrifera_M_contig123765.4859.1|Name=mRNA_M-pyrifera_M_contig123765.4859.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=411bp|location=Sequence derived from alignment at M-pyrifera_M_contig123765:111..521+ (Macrocystis pyrifera P11B4 male)
CAGGAGTGTCCCACGACCGGAGACCCGGCATTCGACCGGCCTCAGAACCG TAAGCCGCTGGGCATTCCGTCCGGCTTCCTCAAGACCGTGTCGACGAGTG ACGCGCTGGACACGCGCGGCGCGCTGACTGCGGTGGACATGGGCGACGGG AAGATGGCGGTGTGGATGCCGAATCAGGACGCGATGACGAAGAGGGTGAA CGCAACGCAGCGGCGTCTGGCCGCGGCTGCGCGCGCTGCCAAGGAGGCTC CGCCCAGCCTTCGCTGTCCCGTGTGCAGTGCACTGCTGCGCGAGGCGGTG TGCTTGCCCTGCTGTGGTGCGCGTGCGTGCGATGAGTGTGCGCGGGAGGA GATTTTGGCGTCGGATACCGCGCAGTGCCCCGTGTGTAGGACTCAGGGCG TGTCACCGGAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig123765:111..521+

>mRNA_M-pyrifera_M_contig123765.4859.1 ID=mRNA_M-pyrifera_M_contig123765.4859.1|Name=mRNA_M-pyrifera_M_contig123765.4859.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=822bp|location=Sequence derived from alignment at M-pyrifera_M_contig123765:111..521+ (Macrocystis pyrifera P11B4 male)
CAGGAGTGTCCCACGACCGGAGACCCGGCATTCGACCGGCCTCAGAACCG
TAAGCCGCTGGGCATTCCGTCCGGCTTCCTCAAGACCGTGTCGACGAGTG
ACGCGCTGGACACGCGCGGCGCGCTGACTGCGGTGGACATGGGCGACGGG
AAGATGGCGGTGTGGATGCCGAATCAGGACGCGATGACGAAGAGGGTGAA
CGCAACGCAGCGGCGTCTGGCCGCGGCTGCGCGCGCTGCCAAGGAGGCTC
CGCCCAGCCTTCGCTGTCCCGTGTGCAGTGCACTGCTGCGCGAGGCGGTG
TGCTTGCCCTGCTGTGGTGCGCGTGCGTGCGATGAGTGTGCGCGGGAGGA
GATTTTGGCGTCGGATACCGCGCAGTGCCCCGTGTGTAGGACTCAGGGCG
TGTCACCGGACCAGGAGTGTCCCACGACCGGAGACCCGGCATTCGACCGG
CCTCAGAACCGTAAGCCGCTGGGCATTCCGTCCGGCTTCCTCAAGACCGT
GTCGACGAGTGACGCGCTGGACACGCGCGGCGCGCTGACTGCGGTGGACA
TGGGCGACGGGAAGATGGCGGTGTGGATGCCGAATCAGGACGCGATGACG
AAGAGGGTGAACGCAACGCAGCGGCGTCTGGCCGCGGCTGCGCGCGCTGC
CAAGGAGGCTCCGCCCAGCCTTCGCTGTCCCGTGTGCAGTGCACTGCTGC
GCGAGGCGGTGTGCTTGCCCTGCTGTGGTGCGCGTGCGTGCGATGAGTGT
GCGCGGGAGGAGATTTTGGCGTCGGATACCGCGCAGTGCCCCGTGTGTAG
GACTCAGGGCGTGTCACCGGAC
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