mRNA_M-pyrifera_M_contig12375.4856.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12375.4856.1
Unique NamemRNA_M-pyrifera_M_contig12375.4856.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: D7G3Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Z8_ECTSI)

HSP 1 Score: 421 bits (1082), Expect = 1.610e-132
Identity = 206/258 (79.84%), Postives = 224/258 (86.82%), Query Frame = 1 
Query:    1 QVLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERYPGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYKNGLIQA 774
            +VLKHIANQA+VQAAHMRLGTRTGSRRSGKAWRKILSD+DDT   +       G FPAG D RYPRK+VYPGVLDFYRE+DLG NGPSEWP  Q+GNLVFLSARPH+YKDMSE+KSYAKFKKLQD+KGLYTSPTLLAGSIDTGT MLLTGNM PVA+KK Q      NFAEYVSLYPEF+HVF+GDNGQGDV+AAEMM +RYPG LEAVYMHRV+PEEKTFGY+ A TR  WK ANI F GDYVEAACHAYK+GLIQA
Sbjct:  305 EVLKHIANQAKVQAAHMRLGTRTGSRRSGKAWRKILSDVDDTLTSSG------GRFPAGVDARYPRKSVYPGVLDFYRELDLGANGPSEWPHGQLGNLVFLSARPHVYKDMSESKSYAKFKKLQDEKGLYTSPTLLAGSIDTGTTMLLTGNMEPVAEKKFQ------NFAEYVSLYPEFQHVFLGDNGQGDVRAAEMMAKRYPGKLEAVYMHRVVPEEKTFGYQGAVTREAWKKANIVFVGDYVEAACHAYKHGLIQA 550
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: A0A836CE71_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE71_9STRA)

HSP 1 Score: 304 bits (778), Expect = 4.490e-91
Identity = 150/247 (60.73%), Postives = 182/247 (73.68%), Query Frame = 1 
Query:    1 QVLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERYPGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAA 741
            +VLKHIA QA VQAAH  LGTRTG  RS KAWRKILSD+DDT   +       G FPAG D  YPRK VYPGVLDFYRE+DLGV+GP  WP  + GNLVFLSARPH+YKD+SEA +Y+KFK LQ ++GLYTSP+L+AGS+ TG   +L   + P+A+KK +      NF ++ S+YPEFK VF+GDNGQGDV+AAEMMVE  PG+LEA+YMH+V+P  KTFGY   +T  +W+   I FF    EAA
Sbjct:  411 EVLKHIATQAAVQAAHTTLGTRTGRGRSDKAWRKILSDVDDTLTCSG------GRFPAGVDGTYPRKQVYPGVLDFYRELDLGVSGPDAWPVGRTGNLVFLSARPHVYKDISEAHTYSKFKTLQRERGLYTSPSLMAGSVQTGRAYILYNTLEPLAEKKFE------NFMQFRSIYPEFKCVFIGDNGQGDVRAAEMMVEGEPGALEAIYMHQVLPLNKTFGYSGPETLERWRHMGICFFTRITEAA 645
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: A0A2D4C4B6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4B6_PYTIN)

HSP 1 Score: 288 bits (738), Expect = 2.170e-86
Identity = 141/258 (54.65%), Postives = 179/258 (69.38%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERYPGS-LEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYKNGLIQA 774
            +L HI  +A +Q AHMRLGTR   +R   AWRK+LSD+DDT + +       G +PAG D RYPR  VYPGVL FYRE+D+G  GP +W  D VGNLVFLSARPH+YKDMSE KSYAKF  L ++KG++T PT+LAGS+ +G   ++ G++ P+A KK +      NF EY  LYPEF HVFVGDNGQGDV+AAE++VE+Y  S LEA + H V P EKTFGY  ++   +W+  NI FF  YV AA  A++   I+A
Sbjct:  377 LLNHIRREADIQTAHMRLGTRRAMQRRQHAWRKVLSDVDDTLYSSG------GRYPAGIDTRYPRHVVYPGVLSFYRELDMGTAGPDDWRDDHVGNLVFLSARPHVYKDMSEKKSYAKFAALYENKGMHTLPTMLAGSLQSGRAFMVQGDLEPMARKKFE------NFGEYYQLYPEFTHVFVGDNGQGDVRAAELIVEKYGSSALEAAFFHLVQPVEKTFGYHSSEDLERWRKMNIVFFHTYVGAAVEAFRLRKIRA 622
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: D0N9P7_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9P7_PHYIT)

HSP 1 Score: 281 bits (718), Expect = 2.110e-85
Identity = 137/257 (53.31%), Postives = 175/257 (68.09%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERY-PGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYKNGLIQ 771
            VL HI  +A VQ AHMRLGT+ G  R   AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP EW  D+VGNLVFLSARPH+YKD+SE KSYAKF  L +  G++T PT+LAG++ +G   +  G++ P+A KK        NF+E+  LYPEFKHVFVGDNGQGDV+AAE++VE++ P +LEA +  RV P EK F Y   +   +W+  NI FF  YV AA  AY+   I+
Sbjct:  286 VLSHIQREASVQIAHMRLGTKRGRSRKLHAWRKVLSDVDDTLYSSG------GRYPAGLDTRYPRHTLYPGVLPFYRELDMGTVGPDEWTEDRVGNLVFLSARPHVYKDVSEKKSYAKFAALYEKMGMHTLPTMLAGNLTSGRAFMWQGDLEPMAQKKFD------NFSEFYQLYPEFKHVFVGDNGQGDVRAAELIVEKFGPDALEACFFQRVQPMEKMFNYHSPEDLERWRKMNIVFFDTYVGAAVEAYRMNKIR 530
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: W2PZ25_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PZ25_PHYPN)

HSP 1 Score: 282 bits (722), Expect = 2.980e-85
Identity = 134/252 (53.17%), Postives = 175/252 (69.44%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERY-PGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYK 756
            +L HI  +A VQ AHMRLGT+ G  R  +AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP EW  D++GNLVFLSARPH+YKD+SE KSYAKF  L +  G++T PT+LAG++ +G   +  G++ P+A KK +      NF+E+  LYPEFKHVFVGDNGQGDV+AAE++VE++ P +LEA +  RV P EK F Y   +   +W+  NI FF  YV AA  AY+
Sbjct:  346 ILSHIQREASVQIAHMRLGTKRGRSRKQQAWRKVLSDVDDTLYSSG------GRYPAGLDTRYPRHTLYPGVLPFYRELDMGTVGPDEWTDDRIGNLVFLSARPHVYKDVSEKKSYAKFAALHEKMGMHTLPTMLAGNLTSGRAFMWQGDLEPMAQKKFE------NFSEFYQLYPEFKHVFVGDNGQGDVRAAELIVEKFGPDALEAAFFQRVQPMEKIFNYHSKEDLERWRKMNIVFFDTYVGAAVEAYR 585
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: A0A225VUQ5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VUQ5_9STRA)

HSP 1 Score: 280 bits (717), Expect = 7.660e-85
Identity = 135/252 (53.57%), Postives = 172/252 (68.25%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERY-PGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYK 756
            +L HI  +A VQ AHMRLGT+ G  R  +AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP EW  D VGNLVFLSARPH+YKD+SE KSYAKF  L +  G++T PT+LAG++ +G   +  G++ P+A KK +      NF EY  LYPEFKHVFVGDNGQGDV+AAE++VE++ P +LEA +  RV P EK F Y   +   +W+   I FF  YV AA  AY+
Sbjct:  352 ILSHIQREASVQIAHMRLGTKRGRNRKQQAWRKVLSDVDDTLYSSG------GSYPAGLDTRYPRHTLYPGVLPFYRELDMGTVGPDEWTDDHVGNLVFLSARPHVYKDVSEKKSYAKFAALHEKLGMHTLPTMLAGNLKSGRAFMWQGDLEPMAQKKFE------NFCEYYQLYPEFKHVFVGDNGQGDVRAAELIVEKFGPDALEAAFFQRVQPIEKMFNYHSNEDLERWRKMKIIFFDTYVGAAIEAYR 591
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: K3X1H4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1H4_GLOUD)

HSP 1 Score: 284 bits (726), Expect = 1.700e-84
Identity = 138/252 (54.76%), Postives = 175/252 (69.44%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERYPG-SLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYK 756
            +L HI  +A VQ AHMRLGT+    R  +AWRK+LSD+DDT + +       G +PAG D R+PR  VYPGVL FYREMD+G  GP EW  D+VGNLVFLSARPH+YKDMSE KSYAKF  L + KG++T PT+LAG++ +G   ++ G++ P+A KK +      NF+EY  LYPEFKHVFVGDNGQ D++AAE++VE++   +LEA + H V P EKTFGY       KW+  NI FF  YV AA  A+K
Sbjct:  355 ILNHIKREAGVQTAHMRLGTKRARERRQQAWRKVLSDVDDTLYSSG------GRYPAGLDTRFPRHTVYPGVLSFYREMDMGTAGPDEWTDDRVGNLVFLSARPHVYKDMSEKKSYAKFAALYEKKGMHTLPTMLAGNLKSGRAFMVQGDLEPMARKKFE------NFSEYYQLYPEFKHVFVGDNGQADIRAAELIVEKFGSEALEAGFFHLVHPIEKTFGYHSKADIEKWRSMNIIFFNTYVGAAVEAFK 594
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BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: A0A8K1FIM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIM4_PYTOL)

HSP 1 Score: 283 bits (724), Expect = 2.980e-84
Identity = 135/257 (52.53%), Postives = 178/257 (69.26%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERYPGS-LEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYKNGLIQ 771
            +L HI  +A VQ AHMRLGT+   +R  +AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP +W  D+VGNLVFLSARPH+YKD+SE KSYAKF  L ++KG++T PT+LAG++ +G   ++ G++ P+A KK +      NF E+  LYPEF HVFVGDNGQGDV+AAE++ E++  S LEA +   + P EKTFGY   +   KW+  NI FF  Y  AA  AYK G+I+
Sbjct:  360 ILNHIRREAGVQTAHMRLGTKRAMKRRQQAWRKVLSDVDDTLYSSG------GRYPAGLDTRYPRHTLYPGVLSFYRELDMGATGPDDWTDDRVGNLVFLSARPHVYKDVSEKKSYAKFAALYENKGMHTLPTMLAGNLKSGRAFMVQGDLEPMAQKKYE------NFCEFYQLYPEFTHVFVGDNGQGDVRAAELIHEKFGSSALEAGFFQLIQPIEKTFGYHSKEDIEKWRSMNIVFFNTYAGAAVEAYKMGMIR 604
[Close]
BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: A0A329SZS0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SZS0_9STRA)

HSP 1 Score: 279 bits (714), Expect = 4.290e-84
Identity = 134/252 (53.17%), Postives = 176/252 (69.84%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERY-PGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYK 756
            +L HI  +A VQ AHMRLGT+ G  R  +AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP+EW  D+VGNLVFLSARPH+YKD+SE KSYAKF  L +  G++T PT+LAG++ +G   +  G++ P+A KK +      NF+E+  LYPEFKHVFVGDNGQGDV+AAE++VE++ P +LEA +  RV P EK F Y   +   +W+  NI FF  YV AA  A++
Sbjct:  346 ILSHIQREASVQIAHMRLGTKRGRSRKQQAWRKVLSDVDDTLYSSG------GRYPAGLDTRYPRHTLYPGVLPFYRELDMGTVGPAEWTDDRVGNLVFLSARPHVYKDVSEKKSYAKFAALYEMMGMHTLPTMLAGNLTSGRAFMWQGDLEPMAQKKFE------NFSEFYQLYPEFKHVFVGDNGQGDVRAAELIVEKFGPDALEAGFFQRVQPMEKMFNYHSKEDLERWRKMNIVFFDTYVGAAVEAFR 585
[Close]
BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Match: H3H5B0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5B0_PHYRM)

HSP 1 Score: 277 bits (709), Expect = 2.630e-83
Identity = 132/252 (52.38%), Postives = 173/252 (68.65%), Query Frame = 1 
Query:    4 VLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSLLLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVFLSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTGNMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVERY-PGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHAYK 756
            +L HI  +ARVQ AHMRLGT+ G  R  +AWRK+LSD+DDT + +       G +PAG D RYPR  +YPGVL FYRE+D+G  GP +W  ++VGNLVFLSARPH+YKD+SE KSY KF  L +  G++T PT+LAG++ +G   +  G++ P+A KK        NF E+  LYPEFKHVFVGDNGQGDV+AAE++VE++ P +LEA +  RV P EK F Y   +   +W+  NI FF  YV AA  A++
Sbjct:  355 ILSHIQREARVQIAHMRLGTKRGRSRKQQAWRKVLSDVDDTLYSSG------GRYPAGLDTRYPRHTLYPGVLPFYRELDMGTVGPDDWADERVGNLVFLSARPHVYKDVSEKKSYTKFAALHEKMGMHTLPTMLAGNLTSGRAFMWQGDLEPMAQKKFD------NFCEFYQLYPEFKHVFVGDNGQGDVRAAELIVEKFGPDALEAGFFQRVQPMEKMFNYHSKEDLERWRKMNIIFFDTYVGAAVEAFR 594
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12375.4856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Z8_ECTSI1.610e-13279.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CE71_9STRA4.490e-9160.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2D4C4B6_PYTIN2.170e-8654.65Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
D0N9P7_PHYIT2.110e-8553.31Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
W2PZ25_PHYPN2.980e-8553.17Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A225VUQ5_9STRA7.660e-8553.57Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
K3X1H4_GLOUD1.700e-8454.76Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FIM4_PYTOL2.980e-8452.53Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A329SZS0_9STRA4.290e-8453.17Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
H3H5B0_PHYRM2.630e-8352.38Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12375contigM-pyrifera_M_contig12375:553..7686 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score418.7
Seed ortholog evalue2e-114
Seed eggNOG ortholog2880.D7G3Z8
Hectar predicted targeting categorymitochondrion
EggNOG OGs28KJH@1,2QT0Y@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size774
Cds size774
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815755.945477-CDS-M-pyrifera_M_contig12375:552..6661622815755.945477-CDS-M-pyrifera_M_contig12375:552..666Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 553..666 +
1692277554.495071-CDS-M-pyrifera_M_contig12375:552..6661692277554.495071-CDS-M-pyrifera_M_contig12375:552..666Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 553..666 +
1622815755.958206-CDS-M-pyrifera_M_contig12375:700..7431622815755.958206-CDS-M-pyrifera_M_contig12375:700..743Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 701..743 +
1692277554.5076153-CDS-M-pyrifera_M_contig12375:700..7431692277554.5076153-CDS-M-pyrifera_M_contig12375:700..743Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 701..743 +
1622815755.9699974-CDS-M-pyrifera_M_contig12375:988..11131622815755.9699974-CDS-M-pyrifera_M_contig12375:988..1113Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 989..1113 +
1692277554.516817-CDS-M-pyrifera_M_contig12375:988..11131692277554.516817-CDS-M-pyrifera_M_contig12375:988..1113Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 989..1113 +
1622815755.9843037-CDS-M-pyrifera_M_contig12375:2016..21061622815755.9843037-CDS-M-pyrifera_M_contig12375:2016..2106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 2017..2106 +
1692277554.5236263-CDS-M-pyrifera_M_contig12375:2016..21061692277554.5236263-CDS-M-pyrifera_M_contig12375:2016..2106Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 2017..2106 +
1622815756.0005665-CDS-M-pyrifera_M_contig12375:3466..35951622815756.0005665-CDS-M-pyrifera_M_contig12375:3466..3595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 3467..3595 +
1692277554.5310946-CDS-M-pyrifera_M_contig12375:3466..35951692277554.5310946-CDS-M-pyrifera_M_contig12375:3466..3595Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 3467..3595 +
1622815756.0111153-CDS-M-pyrifera_M_contig12375:5257..53951622815756.0111153-CDS-M-pyrifera_M_contig12375:5257..5395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 5258..5395 +
1692277554.5387974-CDS-M-pyrifera_M_contig12375:5257..53951692277554.5387974-CDS-M-pyrifera_M_contig12375:5257..5395Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 5258..5395 +
1622815756.0222275-CDS-M-pyrifera_M_contig12375:7551..76861622815756.0222275-CDS-M-pyrifera_M_contig12375:7551..7686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 7552..7686 +
1692277554.5520415-CDS-M-pyrifera_M_contig12375:7551..76861692277554.5520415-CDS-M-pyrifera_M_contig12375:7551..7686Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12375 7552..7686 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12375.4856.1prot_M-pyrifera_M_contig12375.4856.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12375 553..7686 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12375.4856.1

>prot_M-pyrifera_M_contig12375.4856.1 ID=prot_M-pyrifera_M_contig12375.4856.1|Name=mRNA_M-pyrifera_M_contig12375.4856.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=258bp
QVLKHIANQARVQAAHMRLGTRTGSRRSGKAWRKILSDIDDTTFQNPLSL
LLRGHFPAGCDKRYPRKNVYPGVLDFYREMDLGVNGPSEWPSDQVGNLVF
LSARPHLYKDMSEAKSYAKFKKLQDDKGLYTSPTLLAGSIDTGTKMLLTG
NMGPVADKKLQACLLTSNFAEYVSLYPEFKHVFVGDNGQGDVKAAEMMVE
RYPGSLEAVYMHRVMPEEKTFGYKDADTRRKWKVANIFFFGDYVEAACHA
YKNGLIQA
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mRNA from alignment at M-pyrifera_M_contig12375:553..7686+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12375.4856.1 ID=mRNA_M-pyrifera_M_contig12375.4856.1|Name=mRNA_M-pyrifera_M_contig12375.4856.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7134bp|location=Sequence derived from alignment at M-pyrifera_M_contig12375:553..7686+ (Macrocystis pyrifera P11B4 male)
CAGGTGCTGAAGCACATCGCCAACCAGGCAAGGGTACAGGCGGCGCACAT
GAGGCTGGGGACAAGGACTGGCAGCAGGCGCAGCGGGAAGGCCTGGCGGA
AGATATTGTCCGACGTGGATGACACGCTCACCTCTTCAGGCGAGCAAGAT
TGATGATACAACTTTTCAAAATCCACTCTCCCTGCTCCTTCGTTGTTTTG
TTGCGGGGAACCCATTAGTACGCAAGCCTTTTTCTTCGTGATGTGACAAG
CGCTATCCCCCCAAGGTCGTTTTGTTTTCTATTCGTTCTCGACTTTTTTT
CGGTCGACCGCAATCGAAACTCGCTGATGCTACACACGAGTATATTGTTT
TAGTGTGCAACACCATTGTTAAAAGGTAGGCTTATGTCGAAATCCGCTGC
TCCCGCATTGTTTTGTTGTGGAAACCCCATGAATAGGTGGGCATTTTCCT
GCGGGGTGTGACAAGCGCTATCCCCGCAAGAACGTGTACCCCGGCGTGCT
GGACTTTTACCGAGAGATGGACCTGGGTGTCAACGGGCCGAGCGAGTGGC
CGAGCGACCAGGTTAGCCACACATCGGGAAAATCTCGATGAAGATCCTGT
CTTCGCCGTTTTGGTATGTTGTGCAAGACCCGCATCATCGAGATCCTGAA
ATGTGTCGTGTGATAATGTGCGAAACCCGCATCATTCACGGTAGGATTTT
GTGGGTGTCCTTACGCTATCGTATGTTTTACGAGAACCGCATCACCTAAT
TCTAGCGATCCCGTATTTATTCGTTGTTATGTGTTGTGCGAGACCCGGTA
TCATGGTACCGTAGATCCTGTGCTTGTCCTTAGGGTATGATATGTTGTGC
AAGACCCGTGAAGTACTTATGTGCCATCCGACATGGCGTATGTGCAGGGG
TGGTGCCGTACAAGCAGTACAGATCCCACCCGGAACAGATGATCTATATA
CAATAGATCGTACAGATCATAACATATACATGGTACTCGTATATATACCA
GGAATCGAAGATTGATTTGCCCTGAAGCATCTAGCACATGAACTGGTGGG
GACCTGATCTATCCGGTGTGTGGCTAGACTGTCGATCATCGACCCGAACG
GACCGAATAATGCCATGTACCTGGTGCGCAGGCGTTTTTCGTTTTTCGTT
CTTGTGGTGCTCCCGGAGGTATAATTTTGTAGCTCGTGGTGACGATGCAA
TGCAAACCGTGGGGACGATGAGACCCTCCCCCTCCCCACCTCGCGCCCTC
CGTCTCGAAGTGGATGCGGAGTCAATGATCAAATGCCTTGAGGCAAGCAA
CAAATGAGTTGCACCCCCCCCCCCCACCCTATTATCCGTCTCGAAAGGGG
GTCAATGGTCAAATGGCTAAGGCAAGCAACAAATGAGTACGCCACCCCCC
CTATCCTCCCCTGCCCTTCCACCTCCGCCATCCCCTCTCTCCGGCCTCTA
TGTTCGCCTCCCAGGTTGGAAACCTCGTGTTCTTGTCGGCGCGTCCGCAC
TTGTACAAGGACATGTCGGAAGCGAAGAGCTACGCCAAATTCAAGAAACT
GCAGGTAGGCAATATTTTTTGTGTTTTTATTCCGTTGGTGATTTGCATCC
TATAATATCTTCGCCGTTCTTTTCTCTCCGTCCTACTATCGCAGATCCGG
GGTCACACCGCAGCCCTCATCCCCCCTCTCCCCGCTTCGTACCGCATCGG
AAGAGGGACTTTTTTGTGCACTTTTTTTTTTTCAAAATCAATCCTACTCC
AACTTGAAGCAGATTGTTTTGTGTACGCGAGGCGTGAGTGCAGTTGTTGA
AAAGGTCGTTACATGGTAAGCCTGCCTACGTACGTACGTATTACACGTGG
GTGAAAATGTTTTCGATGTCTTGTTATACAGCAGTAATGCCGGTCCCTCT
CTATATAGTGCCGGTATGTATGCTTCAGGCAACAATACCGGCATCATAAT
AGCGGCAACCGGCACTAACTACTCCCTCCGCACACTACCTACCACACTGA
TTTTACTCCCTCCCCTTGCACATTGTTGGCGTAAAAAATATCATTGTGGA
GACATCGAACCATAACCATGTAGCATAACATCAGCCGTACCGGATTGAGA
AGTTGTCAGCTCCTTGTAGGGTTGGCTGCGTTGTTTAATCTCTCCACCTT
TGTTTTTTTACTCCCACATTGTGCAGGGGGGGAGGGGGGGGGGGCTGTGT
GGTGTACAATGGTGGTTGGTCAAGGGGTTAAATCGCGGTCAAGGCCTATT
TGCAAGCGTATTTCGGCCTTAGCAACATACTAGTTTTAGTGTACGAGGGT
GATCGGTCTGAAGGTCAAATCGCGATCAAGGCCTATTTGCAAGCCTATTT
CAGCGTTACCATGCTACATAGTTTTAGTGTACGGGAGTGGTCAGTCAAGG
ATATCAAATCCCAAGCAACCCCTGTTGGCAAAGCCTATTTCGGCCTAAAC
ATACGAGTTTTCGTGTACGAGGGCGGTCGGGTCACGCGGTCAAACCGCGG
TCAAAGCCTATTTGCAGGCCTATTTTTCGGCCTTAACATACTAGCTTTAG
TGTATGAGGGTGGTCCGTCAACCATGTCAAATCGCGGTCAAGAGCTATTT
GCAAGCCTAGATCGGCCTTAACGTACTGGTTTTAGCGTACGAGGGTGGTC
GGTCAAGGGGTTAAATCGTGGTGTCGCGGTAGAAGACAGGTATATTTTGC
GACGCGTCAAGACTGTCAAGACCTCTTTTGGCCTTGACATACTAGTACTA
ATGTAGGGGGCGGTCAGTCAAGGGATCGCTACAGTTGTGCTACCGCTCCG
GAAATACAAACGAGTATATACGTATATACGTACCTGGTAAAATGCTCCCT
CTCCCCCCCCCCCCCCTCCCTCTCTCCCTCCCCCCTTCCGTCTGTCCTTC
CCTCTCTCTGGCAGGATGACAAGGGCCTGTACACGAGTCCCACCCTGCTG
GCCGGCAGCATAGACACTGGCACCAAGATGCTCCTCACCGGCAACATGGG
GCCTGTCGCCGACAAGAAGCTGCAGGCATGCCTCCTGACCAGTGTCGTTC
GGAAATGTCTCATGTATCGAAATATCGATCTTTTCATATATGCCGCGCAT
CGATGTGCCGAACATCGATGTACCGAGTATCGATCCACCGAACATCGATC
GATAGACGGATGTATCGAACTCACTTGCGATATACTTTGCTTGGATGTAT
CGGACTTCCGATGTATATACCCGGTACATCGTATCGAGCGCGTTTTGCCC
TCTATTCCCTGGCGTCGCCGTGCTTCTGATGCTGGTAACGAACTAAATGT
TTCGACACATTGATGAACATGGCGCGGGGCACCAAAATGCTACTCGCGAG
ACATATTGGGGCCTGTGGCCGAGAACATTGGTTGCAGACATGGAGGGGAC
GAGTGCATTGGGAGTATGGCTGCTGCTGTTCGGTTTCGTCTGTCCGAAAA
AAAATAAAAGGCTCAAATAAATTGGTGTACTTGGAAGTATTAATCGATCG
GCATCGTTTACATTGTCACACCAGTCTGGGCACGAATATAAGGAACGTTT
TGTATTGATTTTAATGTATAAAAGATCCTTATATTTCCGGCCAGAGTGAT
ACTTACTACAGTAGCTCTCACCGAGAAACAAATTACGTGACGAAACAAGA
AACCTACTCCCAAAAATGTTAACGTTCCTGACCAGGGCTTCGCCGTCGTA
TATATAAATATACCTATAATGATCCTCAGCCTTATCCGATCCGTTTTTGG
TCGGCGGATCTCTCCCGCCTCTGACCGTCTTTCCACGCGGCTTCTTCGCT
GGGGCGTTCCCCCTCCACGCCTGGACCGCCCGGCGTCGGAGGATCCGCCC
GCTCCGCGCCGTGGCGCCCGCGCGAAGCCTTGAGGTTGAGATCTACGAAG
GAATCCCCGAAAATCCCTGCCCTGTTAGTGTTTTGCGCCATGGTCTCTCA
ACCAAGTGTATGCGTTCGCGTGGTTCTTTCCGGCACGTCCTCTCCGACCT
CCGACCCATGGGGAGGGTCACCTACCCGGCCGACGTCGCCATTGTGGGGG
CCTGCGCGCGTGGCTGTATCTGAGACGTCGATGGAACGCCCCGATAGCGC
ATGCCACCCAGGCTTAGTTGAGAACTGCTGTCCACATTTTTTTGCCCGGT
ATAAATATCGCACATTACCTAGCAGCACTCATGACGGCCAGCAGCACGTA
TGGTGTGTACGCTATCATACAGCGACAGCTACCCTGGGGCTGTACTATTT
ACACGTGGCTACGGAGATGTACAGCTGCAGCAGGACTGCTACTATAGCAG
CTGCTGTGGACTGCACCTTTCTACGGAGCTACTGCGCTGTCGGCCATCGC
GTACTCCCTGAGTTCGAAGTTGCACCGCCTTGTAGGATTCCGCCGCTTTT
CGGTTAATCGGCAAGTAATCGTCAGTTGTGCCACCTTTTCGAACGTTCAT
GGAGTGTGGAGCGCACGCTCTAAATCTCTCGGCTTCGAGCCTCAGCCTCC
TCCTCCTCCTCTACATTATACGCCCATCACGTAAGTCTGCGACCGGCGGC
CGTCCAGGCCGCCGGCGTTGTCCCTTTCTGTAATATAATAAGATGTACGT
GTCACCGTCTTTACTGTCGATATCGAGCATGCCTTCGCTACACACTGACA
GCAACACAGGTAACAAGAAACGCTAAAACAAATCGTTTTTTCCTTGCCTC
ACCAGAATTTCGCCGAGTACGTGAGCCTGTACCCCGAGTTCAAGCACGTC
TTCGTGGGAGACAATGGCCAGGGTGACGTCAAGGCGGCAGAGATGATGGT
GGAGCGCTACCCTGGCTCTTTGGAGGCGGTGTACATGCACAGGGTGAGGG
GGGGAGGGGGGAAGGGAGTGTACTCGAATTCATGCACGGCCGTCGTCGTG
TGACCATAGACCCTCGCAACCCCTTACAATGCCGGGACAGAGCACGTCGG
TTTTTCACCGACCAGACAGAGGTACCGATTTGATGCTGGCCTTTGTCATT
CGATTCTTGACCGCGCAATCCTTTCAAGACGGAGCACCGTTCCCAGCACC
GTTCCTACTCCTATTAATACTAGAGACAACTTGAACATTTGGACGCTCGT
TGCGTTCTTTCCATGGGGGATATAGGAGTTGGCTGGTGGTTGGAGGAGGT
GCCGTGTGGTTTTTGTTCGTGCGAAGGGTAGGGCGAGAGAGCAGGGGATA
GGAGTTTGTTGGGGGTGTAGTGATTTTGGTAGGAGGGGTCATGGTTTTGT
ACATACACAGGGTGGGAGAGGGGGGGAGGGAAGGGAATAGGAGTAGGTTG
GGGGGGAGATTCGGGGATTTTGTACATGCACAGGGTGCGAGGAGAAGCAG
GGGGTAGGGGTTGGTTGAAGGTGTCGTGGTTTTGTACATGCACAAGGTGA
GCGAAAGGGGGAGGGGATAGGGGTTGGCTGGACGGGGGTCAGTGGTTTTG
TACGTGCACAGGGTTGTAGGGGGGGTGTTGCATGGGGTAGGGGTTGGTTT
TGTTTCGAGGAGGCGTTGTGGTTTTGTACATGTACATGGTGATAGCGGGG
GGGTAGGGGATGGGACTTGGTTCTGGTTTTGTATATACATGCGTAGGACT
AGAGGAGGGGGGGTAAGGGTTGTTTGAGGTGAGGTGTTCGTTTTTTTTCT
TTTTTGGTTGTCGTTTTGACCGTGCTGTAGTCTTGAGACGTAGCACTGTT
GGTGGTGTTGGTGTTGCGGTCGTCGGTGCTGGTGACCGTGGGGATGATAA
CTTCTCGTACTTCGGACAGATCATGATCTAGATCATCTATCATGTAGATG
TTCTACTGTAGATCATCTAGTTCCTCTCTTAACCGTGCGTGAAAGGTTTG
TGCAAGACTTGTCTGCATAGTACATATCCAAGCCAGGAAACATGTGCTGT
GTATATCATGTACAGTGTACCGGGTCCCAACCGGCAGCATGAATTACTGT
AGATAACACCACAGATGAAGTGGGAATATATCTACATGACCTTTCATCGC
CCTTGCTCATTTTTCTTGCCATCTAGTCCATGGCCACAAAGCCAGGCTAT
ATAAGGACAGCGCCTATTTGTGAGACATGTCTTTTACGCCATAACCACCA
CCCATGTGTCTGATTGGCTACTACACTAGTTTGGCCCTATTTCTCCAAAG
AGACCACCTCCCGAACAAAGTCGGAACACAGCCCCGGCGCCGCAAAGCCG
TGTGGATTGGCCCCTGCGGGTCGGGTATTAGGTTAGAGTTAGGGTTTAGG
GTTAGGGTCAGGGTCGGGTTGGGTCCGGTCGGCACTTGTTTGCCGACAGT
AAATTAGTTGCCTTTGGATGCTCATCTGTTGGTTCTCTCGTGCAAGACAT
GTCTTGCAAATAGGCGCGCCGTTGAGGAGAAAACCAAGCGCCAAAACAAC
TAGTACGTACCACAGCACGTAAGGAAAGGGTACTGCAGGCTGCGGTATAC
CATCCGGTATCCCTTGCAAACCAATTGGTGCCAGGAAAATGTTTCGTGGA
AATGCGTGGGAGTAGGTTGGAGGATATCTCGTGAGTGTGGTTTTTGTTTC
ACCGCCGTTTCCAGTCGGTGCCGTTCAAGATTTGGCCATTGTGCTTTGCC
CGTATTATCCTACTTTGTGCATGCAGACGACGTCGGATGTTCGTGATGTA
AATTTACAGACGAATTCATTGATTCGTTCGTTCTTCAATTCATTCATCTA
TTAATAGTCACTCATCGTGTCGTTCATTTACTGATCGATCAATACACTCA
TTTGTTCATTCAGCTATTAATACGGTATGTATATCAGGTCTTCGGTCGAT
TGGGTTGTCAATGCATGCATGCATTCGGTTGTCCTTCGTGACGCGTTTTT
CCTTCGTCACTTCATTCGTTTCTTCAGTAATCAACTCGTTCATCGAAATC
AGTTCGTCTGTCAACGCATGCGTCCAAGCTTTCGGTCGTTGATCCGTCCA
TCAATCTGCCCTGGGTGTTTTTCTCTCGGGGTTTTAAACTTGAACACAGG
TGATGCCGGAAGAGAAAACGTTCGGCTATAAGGACGCCGACACCCGTCGG
AAGTGGAAAGTAGCCAACATCTTCTTCTTCGGCGACTACGTGGAGGCCGC
CTGCCACGCCTACAAAAACGGGCTCATCCAGGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12375:553..7686+

>mRNA_M-pyrifera_M_contig12375.4856.1 ID=mRNA_M-pyrifera_M_contig12375.4856.1|Name=mRNA_M-pyrifera_M_contig12375.4856.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1548bp|location=Sequence derived from alignment at M-pyrifera_M_contig12375:553..7686+ (Macrocystis pyrifera P11B4 male)
CAGGTGCTGAAGCACATCGCCAACCAGGCAAGGGTACAGGCGGCGCACAT
GAGGCTGGGGACAAGGACTGGCAGCAGGCGCAGCGGGAAGGCCTGGCGGA
AGATATTGTCCGACCAGGTGCTGAAGCACATCGCCAACCAGGCAAGGGTA
CAGGCGGCGCACATGAGGCTGGGGACAAGGACTGGCAGCAGGCGCAGCGG
GAAGGCCTGGCGGAAGATATTGTCCGACATTGATGATACAACTTTTCAAA
ATCCACTCTCCCTGCTCCTTCATTGATGATACAACTTTTCAAAATCCACT
CTCCCTGCTCCTTCGTGGGCATTTTCCTGCGGGGTGTGACAAGCGCTATC
CCCGCAAGAACGTGTACCCCGGCGTGCTGGACTTTTACCGAGAGATGGAC
CTGGGTGTCAACGGGCCGAGCGAGTGGCCGAGCGACCAGGTGGGCATTTT
CCTGCGGGGTGTGACAAGCGCTATCCCCGCAAGAACGTGTACCCCGGCGT
GCTGGACTTTTACCGAGAGATGGACCTGGGTGTCAACGGGCCGAGCGAGT
GGCCGAGCGACCAGGTTGGAAACCTCGTGTTCTTGTCGGCGCGTCCGCAC
TTGTACAAGGACATGTCGGAAGCGAAGAGCTACGCCAAATTCAAGAAACT
GCAGGTTGGAAACCTCGTGTTCTTGTCGGCGCGTCCGCACTTGTACAAGG
ACATGTCGGAAGCGAAGAGCTACGCCAAATTCAAGAAACTGCAGGATGAC
AAGGGCCTGTACACGAGTCCCACCCTGCTGGCCGGCAGCATAGACACTGG
CACCAAGATGCTCCTCACCGGCAACATGGGGCCTGTCGCCGACAAGAAGC
TGCAGGCATGCCTCCTGACCAGTGATGACAAGGGCCTGTACACGAGTCCC
ACCCTGCTGGCCGGCAGCATAGACACTGGCACCAAGATGCTCCTCACCGG
CAACATGGGGCCTGTCGCCGACAAGAAGCTGCAGGCATGCCTCCTGACCA
GTAATTTCGCCGAGTACGTGAGCCTGTACCCCGAGTTCAAGCACGTCTTC
GTGGGAGACAATGGCCAGGGTGACGTCAAGGCGGCAGAGATGATGGTGGA
GCGCTACCCTGGCTCTTTGGAGGCGGTGTACATGCACAGGAATTTCGCCG
AGTACGTGAGCCTGTACCCCGAGTTCAAGCACGTCTTCGTGGGAGACAAT
GGCCAGGGTGACGTCAAGGCGGCAGAGATGATGGTGGAGCGCTACCCTGG
CTCTTTGGAGGCGGTGTACATGCACAGGGTGATGCCGGAAGAGAAAACGT
TCGGCTATAAGGACGCCGACACCCGTCGGAAGTGGAAAGTAGCCAACATC
TTCTTCTTCGGCGACTACGTGGAGGCCGCCTGCCACGCCTACAAAAACGG
GCTCATCCAGGCAGTGATGCCGGAAGAGAAAACGTTCGGCTATAAGGACG
CCGACACCCGTCGGAAGTGGAAAGTAGCCAACATCTTCTTCTTCGGCGAC
TACGTGGAGGCCGCCTGCCACGCCTACAAAAACGGGCTCATCCAGGCA
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