mRNA_M-pyrifera_M_contig123747.4855.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A1B6Y8W5_9BACT (Uncharacterized protein n=5 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A1B6Y8W5_9BACT) HSP 1 Score: 114 bits (284), Expect = 1.240e-26 Identity = 105/147 (71.43%), Postives = 118/147 (80.27%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPNSGGVFGWVKKLFD 441
YDVP+EVEEYRYRAELVG KA Q++SLVSKMD++DI++I+ EVGY P E+ LP EVK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K++ LPRP+YDGLSGGREG SGGVFGWVKKLF+
Sbjct: 438 YDVPNEVEEYRYRAELVGSKKAGQMVSLVSKMDRDDIEKITNEVGYAPEEIKLPEEVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETAD------------KSYGLPRPSYDGLSGGREGD-RSGGVFGWVKKLFN 571
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A6A8Q4X6_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q4X6_9BACT) HSP 1 Score: 110 bits (276), Expect = 1.360e-25 Identity = 110/152 (72.37%), Postives = 122/152 (80.26%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGK-----PN-SGGVFGWVKKLF 438
YDVPSEVEEY+YRAELVG+GKAS++ISLVSKMD++DI +I EEVG+ P+E+ LP EVKE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K LP PTYDGLSGGREGK PN + G FGW+KKLF
Sbjct: 395 YDVPSEVEEYKYRAELVGRGKASRMISLVSKMDRDDINKIVEEVGFSPTEIPLPKEVKEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----------KKGGLPLPTYDGLSGGREGKGKRPAPNDNSGAFGWIKKLF 536
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: UPI00036331C2 (DEAD/DEAH box helicase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00036331C2) HSP 1 Score: 109 bits (273), Expect = 4.770e-25 Identity = 120/151 (79.47%), Postives = 131/151 (86.75%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEV---KEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFEL--PRPTYDGLSGGREGKPNSGGVFGWVKKLF 438
YDVPSEVEEY+YRAELVG KA+Q++SLVSKMD+EDI RI++EVGY P E+ LP EV K+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K EL PRP+YDGLSGGREG+ GVFGWVKKLF
Sbjct: 521 YDVPSEVEEYKYRAELVGNKKAAQMVSLVSKMDREDIDRITKEVGYAPVEIKLPEEVLEKKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSKRDELALPRPSYDGLSGGREGREEPKGVFGWVKKLF 671
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A2D8CJ24_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CJ24_9BACT) HSP 1 Score: 108 bits (271), Expect = 7.180e-25 Identity = 114/155 (73.55%), Postives = 130/155 (83.87%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPN--------SGGVFGWVKKLFD 441
YDVP+EVEEY+YRAELVG GKA++++SLVSKMD++DI I E+VG+ P+E+ LP EVKE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LPRP+YDGLSGG+EGK + S G FGW+KKLFD
Sbjct: 402 YDVPNEVEEYKYRAELVGNGKAARMVSLVSKMDKDDIDEIVEKVGFAPTEIPLPEEVKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKSTNGLPRPSYDGLSGGKEGKKDRKRPSPGKSDGAFGWIKKLFD 556
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A2D9FVK7_9BACT (Uncharacterized protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D9FVK7_9BACT) HSP 1 Score: 107 bits (267), Expect = 2.280e-24 Identity = 93/155 (60.00%), Postives = 109/155 (70.32%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPN--------SGGVFGWVKKLFD 441
YDVP+EVEEY+YRAELVG+GKA++I+SLVSKMD++DI I ++VGY P+EL LP EVKE XXXXXXXXXXXXXXXXXXXXXXXXXXX ++ LPRPTYDGLSGG+EG N S G FGW+KKLF+
Sbjct: 390 YDVPNEVEEYKYRAELVGRGKAARIVSLVSKMDKDDIDEIVKKVGYAPTELPLPEEVKEKKSRGKNXXXXXXXXXXXXXXXXXXXXXXXXXXXEK-----------------QSNGLPRPTYDGLSGGKEGDENGKRPTPSSSDGAFGWIKKLFN 527
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A521CFZ6_9BACT (Superfamily II DNA and RNA helicase n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521CFZ6_9BACT) HSP 1 Score: 107 bits (267), Expect = 2.400e-24 Identity = 96/157 (61.15%), Postives = 110/157 (70.06%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGK-------PNSG---GVFGWVKKLFD 441
YDVP+EVEEY+YRAELVGKGKA+++ISLVSKMD++DI I ++VGY P E+ LP EVKE XXXXXXXXXXXXXXXXXXXXXXXXXXXX K LPRPTYDGLSGG+EGK P+ G G FGW+KKLF+
Sbjct: 395 YDVPNEVEEYKYRAELVGKGKATRMISLVSKMDKDDIDEIVKQVGYAPKEIPLPEEVKEKKGRGKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKKEN------------KTNGLPRPTYDGLSGGKEGKKKGKGKRPSPGKSDGAFGWIKKLFN 539
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A3M8FZ24_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FZ24_9BACT) HSP 1 Score: 106 bits (264), Expect = 5.570e-24 Identity = 64/147 (43.54%), Postives = 77/147 (52.38%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPNSGGVFGWVKKLFD 441
YDVP V+EY R ELV GK ++IISLVSKMD++DI RIS+E+GY P E+ LP++VKE K ELPRPTY+GLSGGR+G NS GVFGWVKKLF+
Sbjct: 387 YDVPESVDEYSRRIELVKSGKTARIISLVSKMDKDDIARISDELGYAPFEIPLPLQVKEKKKGNKSGPKKRATGKKPAAQKNKAKKAPRKKV--------------------KPNELPRPTYEGLSGGRDGDSNSKGVFGWVKKLFN 513
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: UPI000364976B (DEAD/DEAH box helicase n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000364976B) HSP 1 Score: 105 bits (262), Expect = 1.100e-23 Identity = 82/155 (52.90%), Postives = 100/155 (64.52%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPN--------SGGVFGWVKKLFD 441
YDVP+EVEEY+YRAELVG+GKA++++SLVSKMD++DI I ++VGY P+E+ LP EVKE XXXXXXXXXXXXXXXXXX K+ LPRP+YDGLSGG+EG N S G FGW+KKLF+
Sbjct: 389 YDVPNEVEEYKYRAELVGRGKAARMVSLVSKMDKDDIDEIVKKVGYAPTEIPLPEEVKEKKSRGKGKKSSDXXXXXXXXXXXXXXXXXXEK---------------------KSNGLPRPSYDGLSGGKEGDSNGKRPSPSSSDGAFGWIKKLFN 522
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: UPI000CD9DBF2 (DEAD/DEAH box helicase n=1 Tax=Gracilimonas amylolytica TaxID=1749045 RepID=UPI000CD9DBF2) HSP 1 Score: 102 bits (255), Expect = 1.050e-22 Identity = 89/153 (58.17%), Postives = 107/153 (69.93%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGK-----PNS-GGVFGWVKKLFD 441
YDVP+EVEEY+YRAELVG GKA++++SLVSKMD++DI I ++VGY P+E+ LP EVKE XXXXXXXXXXXXXXXXXXXXXXXXX K LPRP+Y+GLSGG+EGK P+S G FGW+KKLF+
Sbjct: 395 YDVPNEVEEYKYRAELVGNGKAARMVSLVSKMDKDDIDEIVKKVGYAPTEIPLPEEVKEKKGRSKKNTDSNKXXXXXXXXXXXXXXXXXXXXXXXXXK--------------KTNGLPRPSYEGLSGGKEGKGKRPAPSSEDGAFGWIKKLFN 533
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Match: A0A6I7NWF8_9BACT (DEAD/DEAH box helicase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6I7NWF8_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 5.960e-20 Identity = 83/146 (56.85%), Postives = 93/146 (63.70%), Query Frame = 1
Query: 1 YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSELALPVEVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAFELPRPTYDGLSGGREGKPNSGGVFGWVKKLF 438
YDVP EV EY+ RAELVG GKAS+I+SLVSK D+ DI I +GY P E+ LP VKE XXXXXXXXXXXXXXXXXXXXXXXX K ELPRPT+D L GGR GKP G+FG++KKLF
Sbjct: 326 YDVPEEVSEYKLRAELVGDGKASRILSLVSKQDRNDINTICSSLGYAPEEVPLPKNVKEKLSGNGGXXXXXXXXXXXXXXXXXXXXXXXXKAPK------------------KIDELPRPTFDQLEGGRTGKPQKKGLFGFIKKLF 453 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123747.4855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123747.4855.1 >prot_M-pyrifera_M_contig123747.4855.1 ID=prot_M-pyrifera_M_contig123747.4855.1|Name=mRNA_M-pyrifera_M_contig123747.4855.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp YDVPSEVEEYRYRAELVGKGKASQIISLVSKMDQEDIKRISEEVGYPPSEback to top mRNA from alignment at M-pyrifera_M_contig123747:2..445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123747.4855.1 ID=mRNA_M-pyrifera_M_contig123747.4855.1|Name=mRNA_M-pyrifera_M_contig123747.4855.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=444bp|location=Sequence derived from alignment at M-pyrifera_M_contig123747:2..445+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123747:2..445+ >mRNA_M-pyrifera_M_contig123747.4855.1 ID=mRNA_M-pyrifera_M_contig123747.4855.1|Name=mRNA_M-pyrifera_M_contig123747.4855.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig123747:2..445+ (Macrocystis pyrifera P11B4 male)back to top |