mRNA_M-pyrifera_M_contig123740.4852.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A7Y2N8R5_9ACTN (MFS transporter n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N8R5_9ACTN) HSP 1 Score: 140 bits (354), Expect = 2.870e-37 Identity = 73/161 (45.34%), Postives = 106/161 (65.84%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGIAPMIAIN 483
R++ N +RF FTF+ AISRG+GLS QL +I ++RD++G+ AP+VG+ R G RVM + + + L + G+ G AIG + G K+ FDV +N WVG+ VAY RRAR SG++E+ WALAALVG+P+ G+LID F W ++G L + +A+
Sbjct: 25 RWLGNTVIRFPFTFLPAISRGSGLSIDQLSLILSMRDLTGLTAPSVGRAADRFGPGRVMVVFGWLGAAATLASALGSYGLAIGFVVFGFAKIGFDVALNGWVGEEVAYRRRARVSGIIELTWALAALVGIPVVGLLIDGFSWWLPAVVIGGLSLPATMALQ 185
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A520Y5A9_9ACTN (MFS transporter n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520Y5A9_9ACTN) HSP 1 Score: 125 bits (315), Expect = 1.280e-31 Identity = 69/159 (43.40%), Postives = 98/159 (61.64%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGIAPMIA 477
RFVSN G R F+F+ AI+RGTGLS ++G I LRD++G+ A +G++ R G + M G + L+A G G +G + G G+L+ + M W+GD VAY +R RA+GLVE+ WA AAL+G+P+ GVLID F W +LG+ I +A
Sbjct: 22 RFVSNTGGRMVFSFLPAITRGTGLSVEEMGQILFLRDLTGLAAGRIGRVIDRWGQRKAMVGGGLLLGIGLLLAMLGPVGVLVGFVLFGFGRLSLGISMTAWIGDEVAYAQRGRATGLVELTWAGAALIGVPICGVLIDVFDWWTPFLVLGVATIGFSLA 180
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A2E7MS02_9ACTN (MFS domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7MS02_9ACTN) HSP 1 Score: 107 bits (268), Expect = 1.020e-24 Identity = 63/148 (42.57%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVM-----GIGTAIATTSYLVATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQ 429
RFVSN+ R F F+ I+RG G+S LG ALRD+ + PA+GK+T R GT RVM G+G A A++G F +IA I K++FDVG +TW G V + R+RA G+VE WA + +VG+PL+ +LI W+
Sbjct: 29 RFVSNVAYRMVFPFLPTIARGIGVSTATLGTTLALRDLVEISGPALGKLTDRQGTKRVMVAALCGLGMAACLQG---ASNGLVVFTFALIAISISKVSFDVGSSTWTGASVPFSDRSRAVGIVETTWAFSFIVGMPLAALLIRLGTWR 173
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A2E7HVN2_9ACTN (MFS domain-containing protein n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E7HVN2_9ACTN) HSP 1 Score: 107 bits (266), Expect = 1.960e-24 Identity = 61/148 (41.22%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVM-----GIGTAIATTSYLVATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQ 429
RFVSN+ R F F+ I+RG G+S LG ALRD+ + PA+GK+T R GT RVM G+G A ++G F +IA + K++FDVG +TW G V + R+RA G+VE WAL+ ++G+PL+ +LI W+
Sbjct: 29 RFVSNVAYRIVFPFLPTIARGIGVSTATLGTTLALRDLVEISGPALGKLTDRQGTRRVMVAALCGLGMAACLQGV---SNGLVVFTFALIAISVSKVSFDVGSSTWTGASVPFSGRSRAIGIVETTWALSFIIGMPLAALLIRLGTWR 173
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A7Y3DGL4_9ACTN (MFS transporter n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3DGL4_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 3.810e-20 Identity = 57/145 (39.31%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVA-TSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQA 432
R V N G R + F+ AISRG G+S + G++ ++R+++G P V + S + + T A + + + TS G G I G+GK FDVG T++ D YERRAR +E+ WA LVG P+SG LID+FGW+A
Sbjct: 15 RLVLNTGYRLVYPFLPAISRGLGVSVDRAGLLVSVRNLAGAATPVVVAAGRHSTRILIALAITLFALGAAITSVTSAFWGAFAGFILMGLGKPAFDVGAMTYLADRTPYERRARYLATIELTWAGGLLVGAPVSGWLIDRFGWEA 159
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A349BBL2_9ACTN (MFS domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349BBL2_9ACTN) HSP 1 Score: 94.0 bits (232), Expect = 1.110e-19 Identity = 54/163 (33.13%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVAT--SGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGIAPMIAIN 483
R V + +RFA+ F+ AI+ G + G +G+ A + +G+ AP VG+ R G R M G I VA G GF IG+ +G+ +D+ M W+GD V + RR RASG+ E+ W+ A L+G+P++G+++ W+ L L+ +A + +
Sbjct: 17 RLVGTVSLRFAYPFLPAIADGLDVGIGAVGLALAAGEGAGLLAPLVGRRLDRIGRRRGMTDGLVIGAVGCAVAAIAPGVVGFGIGLFGIAVGRAFYDISMGAWIGDEVEFARRGRASGIGELAWSGAFLLGVPVAGLVMSATSWRVPYLLSALVMLASIPVVR 179
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A350XSU7_9ACTN (MFS domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A350XSU7_9ACTN) HSP 1 Score: 92.8 bits (229), Expect = 3.130e-19 Identity = 57/147 (38.78%), Postives = 81/147 (55.10%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAP-AVGKITQRSGTVRVMGIGTAIATTSYLV--ATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQA 432
R V N G RF F F+ AISRG G+S Q G++ + R +S V P VG + + R++ G A+ + AT G +G I G+GK TFD +V D +ERRAR ++E+ WA LVG P++G LI ++GW+A
Sbjct: 27 RLVVNTGHRFVFPFLPAISRGLGISLEQSGLLLSARSLSFVATPLVVGTVGRGERRARLIVFGLALLAVGAAITAATGAVAGALVGFILLGMGKPTFDAAAQAYVADRAPFERRARYLSVLELTWAGGMLVGAPVTGWLIAEWGWRA 173
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A0S6WAG8_9BACT (Major facilitator superfamily MFS_1 n=1 Tax=Candidatus Vecturithrix granuli TaxID=1499967 RepID=A0A0S6WAG8_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 5.600e-19 Identity = 56/165 (33.94%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVM----GIGTAIATTSYLVATSGATGFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGIAPMIAIN 483
R V N RFA+ F +SRG G+ + + A+ + + +G IT R G R+M G+ T TT+ GA A+ + +G+GK FD M +++ ++V +ERRARA G++E WA + L+G+PL +LID+ GW+A LL +G+ ++ ++
Sbjct: 12 RLVLNTARRFAYPFAPVLSRGLGVPLTAITSLIAVNQATTIFGLLIGPITDRLGYRRMMLAGLGVLTLGMTTASFFPVYGAVFLALAL--AGLGKTMFDPAMQSYISELVPFERRARAMGILEFAWAGSTLIGIPLIAILIDRLGWRAPFFLLSGIGVLSLLTLS 174
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A136KSI3_9CHLR (Major facilitator transporter n=1 Tax=Chloroflexi bacterium OLB14 TaxID=1617415 RepID=A0A136KSI3_9CHLR) HSP 1 Score: 83.2 bits (204), Expect = 8.740e-16 Identity = 51/156 (32.69%), Postives = 79/156 (50.64%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVATSGAT--GFAIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGI 462
R + N R + F+ +RG G++ + II LR + G +P I + G M +G +I L+ T + AI ++ + IGK FD M + GD + Y +R A + E+ W+ A ++G+PL G LIDQFGW A + LLG+
Sbjct: 12 RTILNTAHRMVYPFLSVFARGLGVNLETMSIIMTLRSLVGAVSPLFAPIADKRGRKFGMLLGVSIFIAGMLIVTLRPSLWTLAIALMMAMIGKFIFDPSMQAYFGDRIPYHKRGTALAVTEVAWSFAFILGIPLVGFLIDQFGWSAPFPVFTLLGL 167
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Match: A0A7C3JB61_9CHLR (MFS transporter n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3JB61_9CHLR) HSP 1 Score: 80.9 bits (198), Expect = 7.930e-15 Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 1
Query: 1 RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITQRSGTVRVMGIGTAIATTSYLVATSGATGF----AIGMIASGIGKLTFDVGMNTWVGDVVAYERRARASGLVEMMWALAALVGLPLSGVLIDQFGWQAAPALLGLLGIAPMIAI 480
R N RF + F A+SRG + + + A+ +G+ +P G ++ R G +M G AI + A G F + ++ +G+ K FD + ++ + V Y RR GL+E+ WA A+LVG+PL G+LID+ GWQ +LG L + M AI
Sbjct: 87 RLFINTSRRFVYPFAPALSRGLDVPLTAVTSLIAVNQFTGILSPFFGPLSDRWGYRVMMLAGLAILAVGMVSA--GILPFYGTVLLALLFAGLTKAIFDPALQAYIAEQVPYRRRGTVMGLIELSWAGASLVGIPLIGILIDRLGWQTPFLVLGGLALLSMAAI 248 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123740.4852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123740.4852.1 >prot_M-pyrifera_M_contig123740.4852.1 ID=prot_M-pyrifera_M_contig123740.4852.1|Name=mRNA_M-pyrifera_M_contig123740.4852.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp RFVSNLGVRFAFTFIDAISRGTGLSHGQLGIIYALRDVSGVGAPAVGKITback to top mRNA from alignment at M-pyrifera_M_contig123740:29..511- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123740.4852.1 ID=mRNA_M-pyrifera_M_contig123740.4852.1|Name=mRNA_M-pyrifera_M_contig123740.4852.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig123740:29..511- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123740:29..511- >mRNA_M-pyrifera_M_contig123740.4852.1 ID=mRNA_M-pyrifera_M_contig123740.4852.1|Name=mRNA_M-pyrifera_M_contig123740.4852.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig123740:29..511- (Macrocystis pyrifera P11B4 male)back to top |