mRNA_M-pyrifera_M_contig12371.4850.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12371.4850.1
Unique NamemRNA_M-pyrifera_M_contig12371.4850.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: D7FXW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW1_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 1.900e-141
Identity = 216/310 (69.68%), Postives = 251/310 (80.97%), Query Frame = 1
Query:    1 RYPLKFVSATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKR--TAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAG-EAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLGGRAAFNLEGGSS 921
            RYP+KFVSATRASDGGCSWVYTLGYGGGAVCGD+VTI+C V E  TAALTTQGSTKV+KR   +++A A+E E ++  RASQ+LLSRV+R  LL VVPDPVTCF++SSF+QHQRFLLE GSSLVLVDWLTSGRMSRGEGW F+RLESRNEVMVQ  +          GGW+ LV DSLVLEELPGL++RERMLG+NVVG+VILLGPR++GLVS +L +E  KRSRFP GLEP+  A G    A      GRT+ S+SPL+GG D WC GL YRFAAERT+DARA+LHDLLLPL+  LGGRA ++ EGG S
Sbjct:   24 RYPIKFVSATRASDGGCSWVYTLGYGGGAVCGDEVTITCHVEENSTAALTTQGSTKVFKRGSKSEHATATELESDQCHRASQTLLSRVARAALLVVVPDPVTCFENSSFKQHQRFLLEHGSSLVLVDWLTSGRMSRGEGWAFNRLESRNEVMVQSCTKGKGQDEDNSGGWKPLVFDSLVLEELPGLTVRERMLGMNVVGIVILLGPRLEGLVSKVLDLETTKRSRFPAGLEPKGAATGDKQTALPPRETGRTLSSVSPLNGGIDDWCRGLAYRFAAERTDDARAMLHDLLLPLQQALGGRAPYSREGGES 333          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A835Z1C4_9STRA (Urease accessory protein UreD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C4_9STRA)

HSP 1 Score: 180 bits (457), Expect = 1.440e-51
Identity = 117/291 (40.21%), Postives = 162/291 (55.67%), Query Frame = 1
Query:   61 YTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKR----------TAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLGGRAAFN 903
            Y +GYGGG +  D+V++ C +    T A+TTQ +TKVYK+          +    GAS +  E      Q++   +S G LL +VPDPVTCFK +++RQ Q F +  G SLVL DWLTSGRM RGE WDF R ES N + V  +                +VLD LVL++    ++++RM G++ VG+ + +GP+V  +V+ LL  E  +R RF      Q G+    +G  G  GG+ + S+SPL G       G V RFAAE+TEDA ALL + L PL+  LG     N
Sbjct:   16 YVIGYGGGLLAKDRVSVECVLDTGATVAITTQSTTKVYKQQKVAPIAVSASGSGNGASSKAEEPPW-CGQTMYCTISTGALLALVPDPVTCFKAANYRQVQEFRVAAGGSLVLCDWLTSGRMERGEVWDFERFESHNAIYVDDS---------------LVVLDPLVLQDGIQGTVKQRMRGMHAVGMAVFIGPQVADMVAQLLAREHARRQRFS--AVRQAGSAAAAMGV-GCTGGKIMSSVSPLPGH------GAVLRFAAEQTEDAYALLQEALEPLEDILGASPYSN 281          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A8J5SYZ9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SYZ9_ZIZPA)

HSP 1 Score: 152 bits (385), Expect = 1.260e-40
Identity = 104/301 (34.55%), Postives = 157/301 (52.16%), Query Frame = 1
Query:    1 RYPLKFVSATRASDGGC--SWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTIC-SLSPLHGGCDAWCG---GLVYRFAAERTEDARALLHDLLLPLKGTLG 885
            +YPLK ++ ++ +   C  +W+Y + YGGG V GD+++ + +VG+ CTAA+TTQ STKVYK  A ++  SEQ  E          +RV +  LL ++PDPVTCF  + + Q Q F +   S+LV+VDW TSGR   GE W FS  +S N ++++                + L +DS++LEE    SI +RM G NVV +V+LLGP+++ +     Q++   +      L P   A G           + +C  + PL   C  +     G+V R  A  TE   + L   L  L+  LG
Sbjct:   33 KYPLKLIAPSKVAPASCGAAWIYAITYGGGIVSGDRISCAVTVGDACTAAMTTQSSTKVYK--AVDSKCSEQVLE----------ARVGKDALLALIPDPVTCFSTARYHQKQVFHVFTDSNLVIVDWFTSGRYESGEKWKFSFYKSINHIILED---------------QPLFIDSVLLEESSNCSIADRMQGYNVVAMVVLLGPKLKHIQD---QMQDEVKKMMSVQLRPPTSAGGRYTSRP-----QPLCPQMPPLIASCSPFGRMGTGMVARITAVSTESVYSFLRHHLAALESFLG 298          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A397Z8I1_BRACM (Uncharacterized protein n=6 Tax=Brassicaceae TaxID=3700 RepID=A0A397Z8I1_BRACM)

HSP 1 Score: 151 bits (382), Expect = 2.650e-40
Identity = 110/308 (35.71%), Postives = 152/308 (49.35%), Query Frame = 1
Query:    1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPR-----------VQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
            +YPLKF+  T+ +  G    W+Y++ YGGG V GD ++   ++G+ CTA LTTQ STKVYK               +Q + Q+L +R+ R  LL VVPDPVTCF  + + Q Q F L   S+LVLVDW+TSGR + GE WDF   +S N V ++   P              L LD+++LE+    SI ERM   + + +VIL GP+           V+ ++S  LQ+  G R        P   AR G +     A     CS     G       G+V R A++ TE     L   L  L+  LG
Sbjct:   23 KYPLKFILPTKVAPVGTDVVWIYSITYGGGIVSGDSISCEFTIGDGCTAVLTTQSSTKVYKAIG------------SQCSEQTLEARIGRESLLVVVPDPVTCFSTARYYQKQNFRLVSDSNLVLVDWITSGRHANGEKWDFEFYKSINNVYLEDDKP--------------LFLDTVLLEKRNIQSIAERMQDYHAIAMVILFGPKLRELQKQVQENVKNMMSEQLQISYGSRRH-----NPDSRARNGFMKPEFIA----SCSTFGPEGK------GVVVRIASDSTESVYNFLRQQLGDLEPLLG 289          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: UPI001F5D12E9 (urease accessory protein D-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D12E9)

HSP 1 Score: 151 bits (382), Expect = 4.340e-40
Identity = 109/309 (35.28%), Postives = 151/309 (48.87%), Query Frame = 1
Query:    1 RYPLKFV--SATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPR-----------VQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPL-HGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
            +YPLK +  S   ++  G  W+Y+L YGGG V GD+++ + SVG+ CTAA+TTQ STKVYK                  + Q L + V +  L  V+PDPVTCF  + + Q Q F +   S+LV+VDW TSGR   GE WDFS  +S N ++++   P              L +DS++LE+    SI ERM   NVV +V+LLGP+           V+ ++S  L+       R+   L+P    +   L          I S SP  H G      G+V R  A  TE     L D L  L+  LG
Sbjct:   40 KYPLKIIVPSKVGSASSGAVWLYSLTYGGGIVSGDRISCTVSVGDGCTAAMTTQASTKVYKAVGLKC------------SEQVLEATVGKDALFAVIPDPVTCFSTARYYQKQVFHVSGSSNLVIVDWFTSGRYENGEIWDFSSYKSVNHILLEEDQP--------------LFIDSVLLEQGSNCSIAERMQEYNVVAMVVLLGPKLKHIQDQMQDEVKNMMSVQLRPPTSGGGRYAARLQPLPSQKRPPL----------IASCSPFGHMGT-----GMVARIVAVSTESVYNFLRDHLAALEPFLG 307          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A3L6EN48_MAIZE (Urease accessory protein D n=4 Tax=Andropogoneae TaxID=147429 RepID=A0A3L6EN48_MAIZE)

HSP 1 Score: 150 bits (378), Expect = 1.110e-39
Identity = 88/211 (41.71%), Postives = 116/211 (54.98%), Query Frame = 1
Query:    1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGL 627
            RYPLK ++ +R     C   W+Y L YGGG V GD V+ + SVG+ CTAA+TTQ STKVYK                  + Q L +RV    LL V+PDPVTCF  + + Q Q F +   S+LVLVDW TSGR   GE WDFS  +S N + +               G + L +DS + E+    SI ERM   NVV +V+LLGP+++ +
Sbjct:   27 RYPLKLIAPSRVGPSSCDAVWLYALTYGGGIVSGDTVSCTVSVGDGCTAAITTQASTKVYKAVGSKC------------SEQLLEARVGEDALLAVIPDPVTCFSTARYHQKQVFHVSANSNLVLVDWFTSGRYESGERWDFSFYKSVNHIFL---------------GDQPLFIDSTLFEQGSSYSIAERMREYNVVAMVVLLGPKLRDI 210          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A251T6J3_HELAN (Putative urease accessory protein D n=3 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T6J3_HELAN)

HSP 1 Score: 149 bits (377), Expect = 1.350e-39
Identity = 105/301 (34.88%), Postives = 151/301 (50.17%), Query Frame = 1
Query:    1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLE-PQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCG---GLVYRFAAERTEDARALLHDLLLPLKGTLG 885
            +YPLKF+  T+A  S+    W+YTL YGGG V GD ++   +V ++CTA LTTQ STKVYK  A               + Q + + +  GGLL V+PDPVTCF  + + Q Q F +  GSSL++VDW+TSGR   GE WDF   +S N + ++                + L LD+++LE     SI ERM    V+ +VILLGP+++ + +   Q++   +      L  P  G R   +   G        +  PL   C+++     G V R AA  TE     L   L  L+  +G
Sbjct:   23 KYPLKFIVPTKAGRSEIDAVWIYTLTYGGGIVSGDCISFDITVEDDCTAVLTTQASTKVYKSVALKC------------SEQIMEASIGNGGLLVVIPDPVTCFSTAKYSQKQVFRIMSGSSLLVVDWITSGRHESGEKWDFILYKSTNHIYME---------------TKPLFLDTVLLENGNVTSIAERMQDYQVIAMVILLGPKLKHIQN---QIQEDVKKIMSEQLHAPSMGGRTKAINGDGY-------TKPPLVASCNSFGPKGIGSVVRIAATTTESVYGFLRSQLAGLEPLIG 286          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A6J1KQ92_CUCMA (urease accessory protein D n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KQ92_CUCMA)

HSP 1 Score: 149 bits (377), Expect = 1.530e-39
Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQ 621
            +YP+KF+   +   S     W+YTL YGGG V GD ++   +V + CTAALTTQ STKVYK   +            +R+ Q L +R+    LL V+PDPVTCF  + + Q Q F ++ GSSLVLVDW TSGR  RGE W+F+  +S N++ ++   P              L  D+++LE+    SI ERM G  V+ +V++LGPRV+
Sbjct:   24 KYPIKFIIPRKVGPSKTDAIWIYTLNYGGGIVSGDSISCELTVKDGCTAALTTQSSTKVYKSRGE------------ERSEQLLEARIGSDALLAVLPDPVTCFATARYAQKQVFRVDSGSSLVLVDWFTSGRHGRGEIWEFNLFKSTNQIFLEDGHP--------------LFFDTVLLEQGSTNSIIERMHGYQVIAMVVILGPRVK 206          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A5N6MK07_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MK07_9ASTR)

HSP 1 Score: 148 bits (374), Expect = 3.730e-39
Identity = 105/298 (35.23%), Postives = 148/298 (49.66%), Query Frame = 1
Query:    1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLE-PQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
            +YPLKF+  T+A  S+    W+Y+L YGGG V GD ++   +V + CTA LTTQ STKVYK                  + Q + +RV  G LL V+PDPVTCF D+ + Q Q F +  GSSL+LVDW+TSGR   GE WDFS  +S N + +                 + L LD+++LE     +I ERM    V+ ++ILLGP+++ + +   Q++   +      L  P    R   +   G      I S +          GG+V R AA  TE     LH  L  ++  LG
Sbjct:   23 KYPLKFIVPTKAGRSEIDAVWIYSLTYGGGIVSGDCISFDLTVEDGCTAVLTTQASTKVYKSVGLKC------------SEQLMEARVGNGALLVVIPDPVTCFSDAKYSQKQVFRIMSGSSLLLVDWITSGRHESGEKWDFSLYKSTNHIYID---------------TKPLFLDTVLLENGNVTTIAERMQDYQVIAMIILLGPKLKHIQN---QIQEDVKKMMSEQLHVPSTRGRTKAVNGDGYIKPSLIASCNSFG---PKGVGGVV-RIAATTTESVYRFLHSQLTGMEPMLG 286          
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A2T7F2H7_9POAL (Uncharacterized protein n=7 Tax=Paniceae TaxID=147428 RepID=A0A2T7F2H7_9POAL)

HSP 1 Score: 148 bits (374), Expect = 4.550e-39
Identity = 87/222 (39.19%), Postives = 122/222 (54.95%), Query Frame = 1
Query:    1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGK 660
            RYPLK ++ ++     C   W+Y L YGGG V GD ++ + SVG+ CTAA+TTQ STKVYK                  + Q L +RV    LL V+PDPVTCF  + + Q Q F +   S+LV+VDW TSGR   GE WDFS  +S N + +               G   L +DS++LE+    S+ E+M   NV+ +V+LLGP+++ +   L+Q E  K
Sbjct:   26 RYPLKLIAPSKVGPASCDAVWLYALTYGGGIVSGDTISCTASVGDGCTAAITTQASTKVYKAVGSKC------------SEQLLEARVGEDALLAVIPDPVTCFSTARYHQKQVFQVSANSNLVVVDWFTSGRYECGEKWDFSFYKSVNHIFL---------------GDHPLFIDSVLLEQGSNWSLAEQMQEYNVIAMVVLLGPKLKSM-QELMQAEVRK 219          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXW1_ECTSI1.900e-14169.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1C4_9STRA1.440e-5140.21Urease accessory protein UreD n=1 Tax=Tribonema mi... [more]
A0A8J5SYZ9_ZIZPA1.260e-4034.55Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A397Z8I1_BRACM2.650e-4035.71Uncharacterized protein n=6 Tax=Brassicaceae TaxID... [more]
UPI001F5D12E94.340e-4035.28urease accessory protein D-like n=1 Tax=Lolium rig... [more]
A0A3L6EN48_MAIZE1.110e-3941.71Urease accessory protein D n=4 Tax=Andropogoneae T... [more]
A0A251T6J3_HELAN1.350e-3934.88Putative urease accessory protein D n=3 Tax=Helian... [more]
A0A6J1KQ92_CUCMA1.530e-3941.15urease accessory protein D n=3 Tax=Cucurbita TaxID... [more]
A0A5N6MK07_9ASTR3.730e-3935.23Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A2T7F2H7_9POAL4.550e-3939.19Uncharacterized protein n=7 Tax=Paniceae TaxID=147... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12371contigM-pyrifera_M_contig12371:252..6938 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.4
Seed ortholog evalue1.2e-113
Seed eggNOG ortholog2880.D7FXW1
Preferred nameureD
KEGG koko:K03190
Hectar predicted targeting categoryother localisation
GOsGO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019627,GO:0034641,GO:0043085,GO:0043603,GO:0044093,GO:0044237,GO:0044281,GO:0050790,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071704,GO:0071941,GO:1901564,GO:1905181,GO:1905182
EggNOG free text desc.nickel cation binding
EggNOG OGs2QSQN@2759,COG0138@1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons7
Model size924
Cds size924
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815755.6802156-CDS-M-pyrifera_M_contig12371:251..3111622815755.6802156-CDS-M-pyrifera_M_contig12371:251..311Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 252..311 +
1692277554.3861403-CDS-M-pyrifera_M_contig12371:251..3111692277554.3861403-CDS-M-pyrifera_M_contig12371:251..311Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 252..311 +
1622815755.692308-CDS-M-pyrifera_M_contig12371:726..8341622815755.692308-CDS-M-pyrifera_M_contig12371:726..834Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 727..834 +
1692277554.3954527-CDS-M-pyrifera_M_contig12371:726..8341692277554.3954527-CDS-M-pyrifera_M_contig12371:726..834Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 727..834 +
1622815755.700878-CDS-M-pyrifera_M_contig12371:1435..15941622815755.700878-CDS-M-pyrifera_M_contig12371:1435..1594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 1436..1594 +
1692277554.402885-CDS-M-pyrifera_M_contig12371:1435..15941692277554.402885-CDS-M-pyrifera_M_contig12371:1435..1594Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 1436..1594 +
1622815755.7100272-CDS-M-pyrifera_M_contig12371:2445..25741622815755.7100272-CDS-M-pyrifera_M_contig12371:2445..2574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 2446..2574 +
1692277554.4101346-CDS-M-pyrifera_M_contig12371:2445..25741692277554.4101346-CDS-M-pyrifera_M_contig12371:2445..2574Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 2446..2574 +
1622815755.7188728-CDS-M-pyrifera_M_contig12371:3147..32731622815755.7188728-CDS-M-pyrifera_M_contig12371:3147..3273Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 3148..3273 +
1692277554.417751-CDS-M-pyrifera_M_contig12371:3147..32731692277554.417751-CDS-M-pyrifera_M_contig12371:3147..3273Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 3148..3273 +
1622815755.7275229-CDS-M-pyrifera_M_contig12371:4809..49601622815755.7275229-CDS-M-pyrifera_M_contig12371:4809..4960Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 4810..4960 +
1692277554.42506-CDS-M-pyrifera_M_contig12371:4809..49601692277554.42506-CDS-M-pyrifera_M_contig12371:4809..4960Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 4810..4960 +
1622815755.7361841-CDS-M-pyrifera_M_contig12371:6747..69381622815755.7361841-CDS-M-pyrifera_M_contig12371:6747..6938Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 6748..6938 +
1692277554.432205-CDS-M-pyrifera_M_contig12371:6747..69381692277554.432205-CDS-M-pyrifera_M_contig12371:6747..6938Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12371 6748..6938 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12371.4850.1prot_M-pyrifera_M_contig12371.4850.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12371 252..6938 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12371.4850.1

>prot_M-pyrifera_M_contig12371.4850.1 ID=prot_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=308bp
RYPLKFVSATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALT
TQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVT
CFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVM
VQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVI
LLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTI
CSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLGGRAAF
NLEGGSS*
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mRNA from alignment at M-pyrifera_M_contig12371:252..6938+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12371.4850.1 ID=mRNA_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6687bp|location=Sequence derived from alignment at M-pyrifera_M_contig12371:252..6938+ (Macrocystis pyrifera P11B4 male)
AGGTACCCTCTCAAGTTCGTTTCGGCAACCAGGGCATCCGATGGAGGGTG TTCGTGGGTGGTGAGTACCGCACCCCGGTCCAACCTTGCCCCGACTCTCC TAAAATTGTCCGCCCTGTCACCTGTTGCGTACGTACGTCGGGTATGATCT GATTCATAACGAACAGCTGTGTTCCGATTTTCCGATCCCGTCACAGCTGC AGTGCACGTTCGACGTTCGACAAGTACCAGTAGCTGTAGATTTTAGTCCG CCCCTCTGCCCGAGAGGTGGTATGTACGTTCTACATTCGACAGCAGTAAT TGTAGACAGCCCCTCTGTCACTGCTGCATCTACAGCAGTAGGCAAGGCAA ACGGGGTACTATCATACTGCTGTAGCGAAACCATTTTCCCTCACGTCTGC CAACCGTGGCTTCGCGTCCCCGAAACCTCACGGCGCAAGCAACGCCCGCT CGTGCGTCAATTCTGCAAAATTCAGTACACGCTCGGCTACGGAGGAGGTG CGGTCTGCGGCGACCAGGTAACGATCTCTTGTTCCGTCGGGGAGGAATGC ACTGCGGCTCTCACCACCCAGGGGTCAACAAAGGTGTGCTTCATTGCTGT ATACCGACACCTCTTGGATGTCGAGTACAGTATGCGTAGTTACGGCTGCT GCTGCTGTGGACCTCGTTTTTCGTGCCTCGTTGCTGTATGCGCTGTTGCT GCTTTTCCCCTTACTGCTGCATGCCTCGTTGCTGCTTGCCCCATTGCTGT GCAGCGGTATTCCGTCAGGCCTACCTTTGGCCCGTCGAACCCTTCAAAAT ACTGTATGCCTCAATACTGCACGATGTACTGCACGATGTAGTCTCGTGCC TGCGTTGTTACTGCTTGGATGCCTCGTTGCTGTACGCATCATTGCTGTAC GGGTGTACCCGATGCCACATGGTTGTGTAGGCCTCATGGCCGCGTATGTT TCAGTGACGATTGCCTCTTTGCCGTATGCCTCGTGGGAACATGCATCCAT TTTGCTATCATACATGCCTCGCTGATGGGCCAGGTGTGCACGATGTGTCT TTGCTGCATGCATCATTGGTGTACGTACGCCGCATTGCTACACGTATGCA TTAGTGCTCCGTCATGCGCCTCATCGCAGTGGGCGTTCCTCGTCGCTATA TGCCCGATTCCTGCATGTCCTTGTTGCGACGCAGGTATACAAGCGCACAG CGCAAAATGCTGGAGCGTCCGAGCAAGAGCACGAGCGCGCCCAACGCGCT TCGCAGTCGCTGCTCTCTCGAGTCTCCAGGGGGGGGCTGCTGACAGTCGT CCCCGATCCAGTGACCTGCTTCAAGGACTCCAGCTTTAGACAGGTGGGAC GGCCGCCGCCCCGTCGTCGCGTCATAACTGCTGTTAGCACCGTCTCGTGG GAACGCGCTCATTGTCGCTCGTTGGTCGCGTTGCAATTGAATCGCATACC CTCCCGTCTATTTCTCACCAGTAGGAATAATACTGCAGTGCGGCACAAAT GAGTGGCGTTGATCTGCTTTTCCCTAGGTGATCACGTTTAAGGTTTGGTA GAGGAAAGGCTGTTTCTGGGATTTTTCGGACTTGAAAGTGAGGAATCTAT CCCGAGTAGGTGTAATCCTACAAAAAAGACAGTCACCTCTCGCCGCGACA TGCCTACGATCAGCCCTCTTTCTTGACGCGTAAGATAGTGTGTTTGGAAG GTGTGAAAACCCGAAAATTCGCTCGGATAATTTTCTACCACCGCACGAAT GGCTACTCTTTGCCGTGATTTCCTACAACGGTACGATTGGGCAGCATGCG GTGTTTTTTAGAGACTGAAAACCTTCGAACACCTCGAAAATTCCGCTCAC CTTGTCTCGCTTCTGCTGCTGTGCGCAGCGACCGCCTTATATTGCCGTCG CCGCTCCATTCCGCCAGCACAGCGACAACCCTCGCCCAAACAGCACCAGC GATCCCGGCTAGTCGTACATTGTCGCCACCCACCCCCACAAGTTTCTATG TACTATGTATATGGATCTAAGTACTTTTTGGAAAAAACGTCATGAACTCC TAACTGTTGGAGGCATCTCTGTTAGGAGTAGGGGCGGTGCTCCGACTCGA AAGGGATGCGTGGTCGATGGCCGAATGACTATGGCAAACAACAAATGAGT ACGCCCCCCCCCCCCAACACTCCCGCCAACATCCCTCCAAACAGCACCAA CGATTCCTTCTCGAGCGCGGTTCGAGCTTGGTTCTCGTCGACTGGCTCAC GAGCGGTCGCATGTCGAGAGGCGAAGGGTGGGACTTCTCCCGTCTGGAGT CGCGCAACGAAGTCATGGTGCAGGTGAGGTGGTATCACATGGTATCATAC ACCGGAAAGCTACGAGAGGGGGAGCACTTCAGTTTTTTCCTGCTCTTTTT TCTCGCTCAAGGAGCTCCTCCATACCCGACATAAACGAAAAGAAGCTGAC CCTGACAAAAAGTTTATGCTTCTTCCACCCGAGGGACTATTCCATGGCCT ACTGTAGGTGTATACGGTGCTCAGCACTGCTGTAAAATTACCATTTCGGG GGACCATAGTAAATAGGACCTACGGTACACACTAAAAAATATATATTTAC CTATTTTTGTAGGCGATATTTGGTCCTAATTACTATGGTCCCCCGTAATA ATTGGATTTGAACGATATGGTGTCCCCGAAATTCCCGCCAAAAAAGTATT AAGCACAACCAACTTTTTTTTTTTTTTTTTTAGTCTAATGTATCGAGTCC CCGAAGTCCGAAAACAACCGCGCTCACAAGTTTCCGGGTGGGATCGGTAT GACACGGCTCTTGCACATCGGAGAGTACAGGATCCAGGAGATGTACAGTA GATCGTAATCTGTCTTGTCTGTGTGTGAAACGTCGTTTTTGGACAGGGGG CGTCGCCCATCGGGCTCGGACCTCGGGGACAAGAGGGCGGGTGGGAAGCG TTGGTCCTGGACTCGCTGGTGTTGGAGGAGCTCCCGGGCCTCTCCATTCG CGAGAGGATGTTGGGGATTAATGTGAGACATGTCGGTCAATGGTCTTGCG GATCGCGTTCATTAGGCTATCATAGCGCAAAACCTACATTTTTTTATGAA TACGGTGTTGAAGAAAAACAGAATCAAGATTTTGCAATTTAGGTCGGTCG GTCGGTCGGTCGGTCGGTCGGTCGATTTGCCGTGGCAAACGAAGCGTGCC CGTTCTCATCCAGAAAGAGGGTAGTTTACCACGTGTCCGACACTATGGTT GGCGGGCCTTGTGTACGAGACAAGCCGGACTAGCCCTATCCGTAACCCCA ACCCAACCAAACTTCCGTGCATGACCAACCAAACGCCAGTATTTGGGTCT CCGAAAAAGTAGTATCTGGCCAGGAAAGAATGTCGTGCCAGCAGTTTTCT GATTGGTCAGAAAACGTAAAGAAGTGTTTTGATTGGTGGAAAATCCCTGA ATATATTGGTAAAAAAAAGGCAAGGAGTTTCGTGCTTGGTGGAAAACCAG AATCAAATCCCTGGATGATACGTGAGGTCATCCAAGGTGACGCCACTCTT GGTCTATGTGCCCTTCTACGGCCGTGGATGGCGTCACCGTAATATCTGAT TGGTTGAACGTTTTATAGGAGAGTTCTGACTGGCGCGAACTCCCTTTTGG TGCGTTAGAAAGGCGTGTTGATGTTGCGGGGGACCATAGTAAATAGGACC TACGGTACACACAAAAACCTATATATTTACCTACTTTTCTTAACAATATT TGGTCCTATGTACTATGGTCCCCCGTAGATAGTATTGACTATTGAATCGT GTTGAGTATGAACATGGAATACCTGTAGTGCTTAACCCGTTTTGGGGACA AACCAGTCAGATTCTAAGTAATTTGTCCCCGAAATGGGACTGCCAAATTA AAAAAGGGTCAAGGTAGGCGTACTTTCCCTCTTTTGGGGTTGAGCTTTTA TTAATAATCTCTTTGGAACTGTGCCCATATTTTGGGCAGAAACCACACGG AATTAGACATGAGTACGTTAAGAAAATACTGGTATATAGCAATTGGGACA CATATCGATTGCGCTGTGATTGTGCGTGAATAGTACTGTAAATTTTGTGC CAATGAGCGAGCGAAACGCTTGATGGGCCAAGGGATCGCTGCTTTTCGGT GCCTGCCTCGTAATAGACTGCCGCCGCCGCCAAGATAAGCGGCGAGACCG CACACGCCACGTACCATGTACAGTCGTCTGGTTTGAACAGTCCCTCCCAT TCCTCGACGCTATGTTTCGACAGCTTGAAAAGCAACCAATTACATACGCA CGAGTCCCAGAACTCGCCTAATACCAGTAGACATCGGACATCCCAGAGAT CACGTAAGTAGAGACGAGTCCCATAAATCGCACAACAGCAAGCGGTAGAT ATTCACATCTTAGTGGGAGCCTCAGCGATGGCTGCCTTGTTTTGCTCGCG CATGCGGACACAACTTTCCAGCGGATCTGTCTCCGCTTTGTTTTTCCGAT CCCTCTCTTCCGTCCTTCTCTCCCGCGCATATACTGGTTTTGGTGGCTCG CCCTTCAGGTGGTTGGTGTTGTCATCCTTCTCGGGCCTCGAGTGCAAGGC TTGGTTTCGACGCTGCTGCAAGTCGAAGCCGGGAAACGGTCGCGCTTCCC CCCCGGCTTAGAGCCGCAGCGGGGTGCCCGCGGTGGTTGTCTGGGGGCGG CGGGGGAAGGTGCAGGGGGACCGAGCGCCAAACAGGTACTGAAAATACAG CTGCATCTTCGAGATACTTGGTAGTACTATTACGGGGGACCGTAGTAAAT AGGACCAAATATTGTTAGTAAAAATAGGTAAATATATAGGCTTTTGTATG TACCGTAGGTCCTATTTACTATGGACCCCCGTAATATTATCTTTACGAAA AACGGAGGACAGGGATTAGAGTCCACCATCGAGCTTATTTTTTTAAATTA CACCCTTTCGCACATGGGGCAGATCAAACAGATCAGATAGATCAGATAGA TCATATAGATCTATCCCCACTCCAGGACCTAGATCTTTCGAGGCGGATAT ATTCCTGATCTGTTCGATTTACAGTGGTTCATGTTACCGGGTGGGAACCG TACATGCTTCCTGTGTCGAATCTGTGCACCACGTACAGATCCTGCACAGG CTGCACAGCATATCTTAACGACGGGTGAGGATCTAGATGATCTATCTGTA GATGATATATCTGATATATCTGTCCGACGTGTAAATAAGTTTACTACTGC CAATAATACTGCATGCATCGGACAATATCATATCCCGGTTTCATGGTGAA GTTTTTTTCAGGGGACATATATCCCTGCTGTAGACTGATCGATCCTACTT TCGTATAGTTATCACAGGGAGGGGGGATAAATAGTAATTATAATCCACGA TTGACCCAACAAAAAATGTATCCTCCCACGTTTTCACACCATGCTTGGTC GTGCTAGCGGCTATTACGGGGGACCATATTAAATAGGACCTGCAATACAC ACAAAAACCTATATATTTCGCTATTTTTACTAACAATATTTGGTCCTATT TACTATGGTCCCCGTCATACATACCAGGTACATACTACTCTGTCCCAATA TATAAGCACCGGTTTTGGACTAATTGTTAAACGAGAAGGTTCTTATATTT GGGGACAGAGTGGTAGTAATACCAGGGTACATAGTAATCATAACCCGCGA TGGACCCAAAATACAGTATACAGGCATCTCCTTATGTTTCCACGCCCCAT TTGGTTCTGATTGCTCTGTTCCCCCCTATGGTACGTAGTCTACTTGTAGC CCGTGTCTTCCGGGGGGGATAGGTGGGATCTAGCTCTTGTGCACGACATC TATCAGGTATGATGAAACATCCAAAACGAACAGCAGGTAGAGGAGTTATT ATTCACGCGGGACCATAGTAAATAGGACCAAATATTGTTTGTGAAAATAG GCGATTGTATAGGTTTTTGTGTGTACCGTAGGTCCTATTTACTATGGTCC CCCGTAAGTAGTAAGGGATCTATTAATAGATCGTGATCTACCCGACTGGT GTAAATAGTAGAGTGTTCAACTCTATTCCCAAGAGGCTTTCTCCCCCACA CATGGTTGCAGTTTCCTGAAGGAGACAGGGGACGGGAGAAATAATGGCTG AAAAGCGTGGCGTTTCTGCTGGACTGGTCCTATGGAGCATTCAACCTAGC TGTAGACTCGCCCCAAGAGATAAGTAATACTGCTGGCAACAAGGCTGCTG TTGCTGTGGTGCCGTACTGCTGCTGCTGCTGCTGCTGCTGATGACGCTGC TGTTGTTGTCCTTCTGTAGCGTCGCTCTTGGGAAACCGTGCGAGGCCGAG GCCAAGTCCGCGCACTGTCCTTTGAAAACAAATGTGCAGATGATGGGGCA AGAAAAAACAAGCGTGCGAGCATCCCACACATGACCCGATAACCGTGCTG CCTGCCCTGAAAATGCCTCTCCAGCAGGCGGCGGCATCTGCTCGAGCGGG GGGGAGGACTATTTGCTCGTTGAGCCCGCTGCACGGTGGGTGCGACGCGT GGTGTGGAGGCCTCGTCTATCGCTTCGCGGCCGAGAGGACCGAGGACGCC CGCGCGCTGCTGCACGACCTCCTCCTGCCGCTCAAGGGGACACTCGGGGG GCGGGCTGCTTTTAACCTGGAGGGGGGGTCATCTTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12371:252..6938+

>mRNA_M-pyrifera_M_contig12371.4850.1 ID=mRNA_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1848bp|location=Sequence derived from alignment at M-pyrifera_M_contig12371:252..6938+ (Macrocystis pyrifera P11B4 male)
AGGTACCCTCTCAAGTTCGTTTCGGCAACCAGGGCATCCGATGGAGGGTG
TTCGTGGGTGAGGTACCCTCTCAAGTTCGTTTCGGCAACCAGGGCATCCG
ATGGAGGGTGTTCGTGGGTGTACACGCTCGGCTACGGAGGAGGTGCGGTC
TGCGGCGACCAGGTAACGATCTCTTGTTCCGTCGGGGAGGAATGCACTGC
GGCTCTCACCACCCAGGGGTCAACAAAGTACACGCTCGGCTACGGAGGAG
GTGCGGTCTGCGGCGACCAGGTAACGATCTCTTGTTCCGTCGGGGAGGAA
TGCACTGCGGCTCTCACCACCCAGGGGTCAACAAAGGTATACAAGCGCAC
AGCGCAAAATGCTGGAGCGTCCGAGCAAGAGCACGAGCGCGCCCAACGCG
CTTCGCAGTCGCTGCTCTCTCGAGTCTCCAGGGGGGGGCTGCTGACAGTC
GTCCCCGATCCAGTGACCTGCTTCAAGGACTCCAGCTTTAGACAGGTATA
CAAGCGCACAGCGCAAAATGCTGGAGCGTCCGAGCAAGAGCACGAGCGCG
CCCAACGCGCTTCGCAGTCGCTGCTCTCTCGAGTCTCCAGGGGGGGGCTG
CTGACAGTCGTCCCCGATCCAGTGACCTGCTTCAAGGACTCCAGCTTTAG
ACAGCACCAACGATTCCTTCTCGAGCGCGGTTCGAGCTTGGTTCTCGTCG
ACTGGCTCACGAGCGGTCGCATGTCGAGAGGCGAAGGGTGGGACTTCTCC
CGTCTGGAGTCGCGCAACGAAGTCATGGTGCAGCACCAACGATTCCTTCT
CGAGCGCGGTTCGAGCTTGGTTCTCGTCGACTGGCTCACGAGCGGTCGCA
TGTCGAGAGGCGAAGGGTGGGACTTCTCCCGTCTGGAGTCGCGCAACGAA
GTCATGGTGCAGGGGGCGTCGCCCATCGGGCTCGGACCTCGGGGACAAGA
GGGCGGGTGGGAAGCGTTGGTCCTGGACTCGCTGGTGTTGGAGGAGCTCC
CGGGCCTCTCCATTCGCGAGAGGATGTTGGGGATTAATGGGGCGTCGCCC
ATCGGGCTCGGACCTCGGGGACAAGAGGGCGGGTGGGAAGCGTTGGTCCT
GGACTCGCTGGTGTTGGAGGAGCTCCCGGGCCTCTCCATTCGCGAGAGGA
TGTTGGGGATTAATGTGGTTGGTGTTGTCATCCTTCTCGGGCCTCGAGTG
CAAGGCTTGGTTTCGACGCTGCTGCAAGTCGAAGCCGGGAAACGGTCGCG
CTTCCCCCCCGGCTTAGAGCCGCAGCGGGGTGCCCGCGGTGGTTGTCTGG
GGGCGGCGGGGGAAGGTGGTTGGTGTTGTCATCCTTCTCGGGCCTCGAGT
GCAAGGCTTGGTTTCGACGCTGCTGCAAGTCGAAGCCGGGAAACGGTCGC
GCTTCCCCCCCGGCTTAGAGCCGCAGCGGGGTGCCCGCGGTGGTTGTCTG
GGGGCGGCGGGGGAAGCGGGGGGGAGGACTATTTGCTCGTTGAGCCCGCT
GCACGGTGGGTGCGACGCGTGGTGTGGAGGCCTCGTCTATCGCTTCGCGG
CCGAGAGGACCGAGGACGCCCGCGCGCTGCTGCACGACCTCCTCCTGCCG
CTCAAGGGGACACTCGGGGGGCGGGCTGCTTTTAACCTGGAGGGGGGGTC
ATCTTGACGGGGGGGAGGACTATTTGCTCGTTGAGCCCGCTGCACGGTGG
GTGCGACGCGTGGTGTGGAGGCCTCGTCTATCGCTTCGCGGCCGAGAGGA
CCGAGGACGCCCGCGCGCTGCTGCACGACCTCCTCCTGCCGCTCAAGGGG
ACACTCGGGGGGCGGGCTGCTTTTAACCTGGAGGGGGGGTCATCTTGA
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