mRNA_M-pyrifera_M_contig12371.4850.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: D7FXW1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXW1_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 1.900e-141 Identity = 216/310 (69.68%), Postives = 251/310 (80.97%), Query Frame = 1
Query: 1 RYPLKFVSATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKR--TAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAG-EAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLGGRAAFNLEGGSS 921
RYP+KFVSATRASDGGCSWVYTLGYGGGAVCGD+VTI+C V E TAALTTQGSTKV+KR +++A A+E E ++ RASQ+LLSRV+R LL VVPDPVTCF++SSF+QHQRFLLE GSSLVLVDWLTSGRMSRGEGW F+RLESRNEVMVQ + GGW+ LV DSLVLEELPGL++RERMLG+NVVG+VILLGPR++GLVS +L +E KRSRFP GLEP+ A G A GRT+ S+SPL+GG D WC GL YRFAAERT+DARA+LHDLLLPL+ LGGRA ++ EGG S
Sbjct: 24 RYPIKFVSATRASDGGCSWVYTLGYGGGAVCGDEVTITCHVEENSTAALTTQGSTKVFKRGSKSEHATATELESDQCHRASQTLLSRVARAALLVVVPDPVTCFENSSFKQHQRFLLEHGSSLVLVDWLTSGRMSRGEGWAFNRLESRNEVMVQSCTKGKGQDEDNSGGWKPLVFDSLVLEELPGLTVRERMLGMNVVGIVILLGPRLEGLVSKVLDLETTKRSRFPAGLEPKGAATGDKQTALPPRETGRTLSSVSPLNGGIDDWCRGLAYRFAAERTDDARAMLHDLLLPLQQALGGRAPYSREGGES 333
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A835Z1C4_9STRA (Urease accessory protein UreD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1C4_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.440e-51 Identity = 117/291 (40.21%), Postives = 162/291 (55.67%), Query Frame = 1
Query: 61 YTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKR----------TAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLGGRAAFN 903
Y +GYGGG + D+V++ C + T A+TTQ +TKVYK+ + GAS + E Q++ +S G LL +VPDPVTCFK +++RQ Q F + G SLVL DWLTSGRM RGE WDF R ES N + V + +VLD LVL++ ++++RM G++ VG+ + +GP+V +V+ LL E +R RF Q G+ +G G GG+ + S+SPL G G V RFAAE+TEDA ALL + L PL+ LG N
Sbjct: 16 YVIGYGGGLLAKDRVSVECVLDTGATVAITTQSTTKVYKQQKVAPIAVSASGSGNGASSKAEEPPW-CGQTMYCTISTGALLALVPDPVTCFKAANYRQVQEFRVAAGGSLVLCDWLTSGRMERGEVWDFERFESHNAIYVDDS---------------LVVLDPLVLQDGIQGTVKQRMRGMHAVGMAVFIGPQVADMVAQLLAREHARRQRFS--AVRQAGSAAAAMGV-GCTGGKIMSSVSPLPGH------GAVLRFAAEQTEDAYALLQEALEPLEDILGASPYSN 281
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A8J5SYZ9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5SYZ9_ZIZPA) HSP 1 Score: 152 bits (385), Expect = 1.260e-40 Identity = 104/301 (34.55%), Postives = 157/301 (52.16%), Query Frame = 1
Query: 1 RYPLKFVSATRASDGGC--SWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTIC-SLSPLHGGCDAWCG---GLVYRFAAERTEDARALLHDLLLPLKGTLG 885
+YPLK ++ ++ + C +W+Y + YGGG V GD+++ + +VG+ CTAA+TTQ STKVYK A ++ SEQ E +RV + LL ++PDPVTCF + + Q Q F + S+LV+VDW TSGR GE W FS +S N ++++ + L +DS++LEE SI +RM G NVV +V+LLGP+++ + Q++ + L P A G + +C + PL C + G+V R A TE + L L L+ LG
Sbjct: 33 KYPLKLIAPSKVAPASCGAAWIYAITYGGGIVSGDRISCAVTVGDACTAAMTTQSSTKVYK--AVDSKCSEQVLE----------ARVGKDALLALIPDPVTCFSTARYHQKQVFHVFTDSNLVIVDWFTSGRYESGEKWKFSFYKSINHIILED---------------QPLFIDSVLLEESSNCSIADRMQGYNVVAMVVLLGPKLKHIQD---QMQDEVKKMMSVQLRPPTSAGGRYTSRP-----QPLCPQMPPLIASCSPFGRMGTGMVARITAVSTESVYSFLRHHLAALESFLG 298
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A397Z8I1_BRACM (Uncharacterized protein n=6 Tax=Brassicaceae TaxID=3700 RepID=A0A397Z8I1_BRACM) HSP 1 Score: 151 bits (382), Expect = 2.650e-40 Identity = 110/308 (35.71%), Postives = 152/308 (49.35%), Query Frame = 1
Query: 1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPR-----------VQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
+YPLKF+ T+ + G W+Y++ YGGG V GD ++ ++G+ CTA LTTQ STKVYK +Q + Q+L +R+ R LL VVPDPVTCF + + Q Q F L S+LVLVDW+TSGR + GE WDF +S N V ++ P L LD+++LE+ SI ERM + + +VIL GP+ V+ ++S LQ+ G R P AR G + A CS G G+V R A++ TE L L L+ LG
Sbjct: 23 KYPLKFILPTKVAPVGTDVVWIYSITYGGGIVSGDSISCEFTIGDGCTAVLTTQSSTKVYKAIG------------SQCSEQTLEARIGRESLLVVVPDPVTCFSTARYYQKQNFRLVSDSNLVLVDWITSGRHANGEKWDFEFYKSINNVYLEDDKP--------------LFLDTVLLEKRNIQSIAERMQDYHAIAMVILFGPKLRELQKQVQENVKNMMSEQLQISYGSRRH-----NPDSRARNGFMKPEFIA----SCSTFGPEGK------GVVVRIASDSTESVYNFLRQQLGDLEPLLG 289
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: UPI001F5D12E9 (urease accessory protein D-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D12E9) HSP 1 Score: 151 bits (382), Expect = 4.340e-40 Identity = 109/309 (35.28%), Postives = 151/309 (48.87%), Query Frame = 1
Query: 1 RYPLKFV--SATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPR-----------VQGLVSTLLQVEAGKRSRFPPGLEPQRGARGGCLGAAGEAGGRTICSLSPL-HGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
+YPLK + S ++ G W+Y+L YGGG V GD+++ + SVG+ CTAA+TTQ STKVYK + Q L + V + L V+PDPVTCF + + Q Q F + S+LV+VDW TSGR GE WDFS +S N ++++ P L +DS++LE+ SI ERM NVV +V+LLGP+ V+ ++S L+ R+ L+P + L I S SP H G G+V R A TE L D L L+ LG
Sbjct: 40 KYPLKIIVPSKVGSASSGAVWLYSLTYGGGIVSGDRISCTVSVGDGCTAAMTTQASTKVYKAVGLKC------------SEQVLEATVGKDALFAVIPDPVTCFSTARYYQKQVFHVSGSSNLVIVDWFTSGRYENGEIWDFSSYKSVNHILLEEDQP--------------LFIDSVLLEQGSNCSIAERMQEYNVVAMVVLLGPKLKHIQDQMQDEVKNMMSVQLRPPTSGGGRYAARLQPLPSQKRPPL----------IASCSPFGHMGT-----GMVARIVAVSTESVYNFLRDHLAALEPFLG 307
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A3L6EN48_MAIZE (Urease accessory protein D n=4 Tax=Andropogoneae TaxID=147429 RepID=A0A3L6EN48_MAIZE) HSP 1 Score: 150 bits (378), Expect = 1.110e-39 Identity = 88/211 (41.71%), Postives = 116/211 (54.98%), Query Frame = 1
Query: 1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGL 627
RYPLK ++ +R C W+Y L YGGG V GD V+ + SVG+ CTAA+TTQ STKVYK + Q L +RV LL V+PDPVTCF + + Q Q F + S+LVLVDW TSGR GE WDFS +S N + + G + L +DS + E+ SI ERM NVV +V+LLGP+++ +
Sbjct: 27 RYPLKLIAPSRVGPSSCDAVWLYALTYGGGIVSGDTVSCTVSVGDGCTAAITTQASTKVYKAVGSKC------------SEQLLEARVGEDALLAVIPDPVTCFSTARYHQKQVFHVSANSNLVLVDWFTSGRYESGERWDFSFYKSVNHIFL---------------GDQPLFIDSTLFEQGSSYSIAERMREYNVVAMVVLLGPKLRDI 210
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A251T6J3_HELAN (Putative urease accessory protein D n=3 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T6J3_HELAN) HSP 1 Score: 149 bits (377), Expect = 1.350e-39 Identity = 105/301 (34.88%), Postives = 151/301 (50.17%), Query Frame = 1
Query: 1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLE-PQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCG---GLVYRFAAERTEDARALLHDLLLPLKGTLG 885
+YPLKF+ T+A S+ W+YTL YGGG V GD ++ +V ++CTA LTTQ STKVYK A + Q + + + GGLL V+PDPVTCF + + Q Q F + GSSL++VDW+TSGR GE WDF +S N + ++ + L LD+++LE SI ERM V+ +VILLGP+++ + + Q++ + L P G R + G + PL C+++ G V R AA TE L L L+ +G
Sbjct: 23 KYPLKFIVPTKAGRSEIDAVWIYTLTYGGGIVSGDCISFDITVEDDCTAVLTTQASTKVYKSVALKC------------SEQIMEASIGNGGLLVVIPDPVTCFSTAKYSQKQVFRIMSGSSLLVVDWITSGRHESGEKWDFILYKSTNHIYME---------------TKPLFLDTVLLENGNVTSIAERMQDYQVIAMVILLGPKLKHIQN---QIQEDVKKIMSEQLHAPSMGGRTKAINGDGY-------TKPPLVASCNSFGPKGIGSVVRIAATTTESVYGFLRSQLAGLEPLIG 286
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A6J1KQ92_CUCMA (urease accessory protein D n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1KQ92_CUCMA) HSP 1 Score: 149 bits (377), Expect = 1.530e-39 Identity = 86/209 (41.15%), Postives = 121/209 (57.89%), Query Frame = 1
Query: 1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQ 621
+YP+KF+ + S W+YTL YGGG V GD ++ +V + CTAALTTQ STKVYK + +R+ Q L +R+ LL V+PDPVTCF + + Q Q F ++ GSSLVLVDW TSGR RGE W+F+ +S N++ ++ P L D+++LE+ SI ERM G V+ +V++LGPRV+
Sbjct: 24 KYPIKFIIPRKVGPSKTDAIWIYTLNYGGGIVSGDSISCELTVKDGCTAALTTQSSTKVYKSRGE------------ERSEQLLEARIGSDALLAVLPDPVTCFATARYAQKQVFRVDSGSSLVLVDWFTSGRHGRGEIWEFNLFKSTNQIFLEDGHP--------------LFFDTVLLEQGSTNSIIERMHGYQVIAMVVILGPRVK 206
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A5N6MK07_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MK07_9ASTR) HSP 1 Score: 148 bits (374), Expect = 3.730e-39 Identity = 105/298 (35.23%), Postives = 148/298 (49.66%), Query Frame = 1
Query: 1 RYPLKFVSATRA--SDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGKRSRFPPGLE-PQRGARGGCLGAAGEAGGRTICSLSPLHGGCDAWCGGLVYRFAAERTEDARALLHDLLLPLKGTLG 885
+YPLKF+ T+A S+ W+Y+L YGGG V GD ++ +V + CTA LTTQ STKVYK + Q + +RV G LL V+PDPVTCF D+ + Q Q F + GSSL+LVDW+TSGR GE WDFS +S N + + + L LD+++LE +I ERM V+ ++ILLGP+++ + + Q++ + L P R + G I S + GG+V R AA TE LH L ++ LG
Sbjct: 23 KYPLKFIVPTKAGRSEIDAVWIYSLTYGGGIVSGDCISFDLTVEDGCTAVLTTQASTKVYKSVGLKC------------SEQLMEARVGNGALLVVIPDPVTCFSDAKYSQKQVFRIMSGSSLLLVDWITSGRHESGEKWDFSLYKSTNHIYID---------------TKPLFLDTVLLENGNVTTIAERMQDYQVIAMIILLGPKLKHIQN---QIQEDVKKMMSEQLHVPSTRGRTKAVNGDGYIKPSLIASCNSFG---PKGVGGVV-RIAATTTESVYRFLHSQLTGMEPMLG 286
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Match: A0A2T7F2H7_9POAL (Uncharacterized protein n=7 Tax=Paniceae TaxID=147428 RepID=A0A2T7F2H7_9POAL) HSP 1 Score: 148 bits (374), Expect = 4.550e-39 Identity = 87/222 (39.19%), Postives = 122/222 (54.95%), Query Frame = 1
Query: 1 RYPLKFVSATRASDGGCS--WVYTLGYGGGAVCGDQVTISCSVGEECTAALTTQGSTKVYKRTAQNAGASEQEHERAQRASQSLLSRVSRGGLLTVVPDPVTCFKDSSFRQHQRFLLERGSSLVLVDWLTSGRMSRGEGWDFSRLESRNEVMVQGASPIGLGPRGQEGGWEALVLDSLVLEELPGLSIRERMLGINVVGVVILLGPRVQGLVSTLLQVEAGK 660
RYPLK ++ ++ C W+Y L YGGG V GD ++ + SVG+ CTAA+TTQ STKVYK + Q L +RV LL V+PDPVTCF + + Q Q F + S+LV+VDW TSGR GE WDFS +S N + + G L +DS++LE+ S+ E+M NV+ +V+LLGP+++ + L+Q E K
Sbjct: 26 RYPLKLIAPSKVGPASCDAVWLYALTYGGGIVSGDTISCTASVGDGCTAAITTQASTKVYKAVGSKC------------SEQLLEARVGEDALLAVIPDPVTCFSTARYHQKQVFQVSANSNLVVVDWFTSGRYECGEKWDFSFYKSVNHIFL---------------GDHPLFIDSVLLEQGSNWSLAEQMQEYNVIAMVVLLGPKLKSM-QELMQAEVRK 219 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12371.4850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12371.4850.1 >prot_M-pyrifera_M_contig12371.4850.1 ID=prot_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=308bp RYPLKFVSATRASDGGCSWVYTLGYGGGAVCGDQVTISCSVGEECTAALTback to top mRNA from alignment at M-pyrifera_M_contig12371:252..6938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12371.4850.1 ID=mRNA_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6687bp|location=Sequence derived from alignment at M-pyrifera_M_contig12371:252..6938+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12371:252..6938+ >mRNA_M-pyrifera_M_contig12371.4850.1 ID=mRNA_M-pyrifera_M_contig12371.4850.1|Name=mRNA_M-pyrifera_M_contig12371.4850.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1848bp|location=Sequence derived from alignment at M-pyrifera_M_contig12371:252..6938+ (Macrocystis pyrifera P11B4 male)back to top |