mRNA_M-pyrifera_M_contig123616.4836.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A517W992_9PLAN (Sensor protein EvgS n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517W992_9PLAN) HSP 1 Score: 320 bits (820), Expect = 5.340e-106 Identity = 162/174 (93.10%), Postives = 171/174 (98.28%), Query Frame = 1
Query: 1 LLEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSSQEAGE 522
LLEIE+LQV+P+Q+GREVVDQL+EQ+RALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSC+PSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAAT T KRGKAGSGFTIISRIAELLQGEIRLEQD SE+SEFTFAI+TGPLDQVRMLSSQEAGE
Sbjct: 154 LLEIEQLQVNPLQLGREVVDQLAEQSRALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCDPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATPTGKRGKAGSGFTIISRIAELLQGEIRLEQDPSENSEFTFAISTGPLDQVRMLSSQEAGE 327
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A518A372_9PLAN (Sensor protein EvgS n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A372_9PLAN) HSP 1 Score: 250 bits (639), Expect = 4.290e-79 Identity = 126/171 (73.68%), Postives = 147/171 (85.96%), Query Frame = 1
Query: 1 LLEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSSQE 513
+LEIE LQV PIQIGREV++QL+EQA NT+HLE++G VP TIQ+DP+LLK+ALVNL N LKL+ +GHIRLTLSC+P+Q+AF FRVSDTG+GIPTDQRQHVFQPFRQ+A T KR KAGSGFTIISRIAELL GEI LEQ++ +HSEFTF IATGPL +VRMLSS E
Sbjct: 124 ILEIESLQVSPIQIGREVIEQLTEQASEQENTLHLELDGPVPATIQSDPSLLKEALVNLTGNVLKLSRQGHIRLTLSCDPTQEAFSFRVSDTGLGIPTDQRQHVFQPFRQSA--TAGKRAKAGSGFTIISRIAELLDGEISLEQESEQHSEFTFQIATGPLHEVRMLSSLE 292
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A517WXH3_9PLAN (Autoinducer 2 sensor kinase/phosphatase LuxQ n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WXH3_9PLAN) HSP 1 Score: 151 bits (382), Expect = 2.700e-40 Identity = 77/167 (46.11%), Postives = 111/167 (66.47%), Query Frame = 1
Query: 7 EIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSS 507
EIEK + +P ++ E+ + L+ +A A NN + +E++G +P+ I TDPT LKQALVNL NA+K T G IR+T+ +P QQ F V+DTG+GIP +Q QH+FQPF Q ++ T K+ G G T+ RIA+ L G++ +E + S+FTF IATG L V M++S
Sbjct: 190 EIEKRKTNPARMLLEIKEFLNHRASAQNNKLLIELQGKIPQFIHTDPTRLKQALVNLTENAIKFTKHGTIRITVEHDPQQQRLYFYVTDTGIGIPMNQLQHIFQPFGQVDSSLTRKQSGIGLGLTMAQRIAKTLDGDVNVESTYRKGSKFTFHIATGDLSGVEMVTS 356
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A518I9B4_9PLAN (Autoinducer 2 sensor kinase/phosphatase LuxQ n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I9B4_9PLAN) HSP 1 Score: 142 bits (358), Expect = 8.570e-37 Identity = 72/168 (42.86%), Postives = 105/168 (62.50%), Query Frame = 1
Query: 4 LEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSS 507
L +EK ++P++ +V L ++A+A N +HLE++G VP IQTDPT LKQALVNL+ NA+K T+ G IR+ + Q C+ + D+G+GI + H+F+PF QA ++T+ K G G G TI RIAELL G + L+ + + SEFT +IA ML+S
Sbjct: 198 LNLEKRNLNPVRSLLDVKSLLEDRAKANQNKLHLELQGEVPAVIQTDPTRLKQALVNLIGNAIKFTSNGTIRIRIEYHAQSQLLCYHIIDSGIGISDTELHHIFKPFGQADSSTSRKHGGTGLGLTITKRIAELLGGNVSLKSEYGKGSEFTLSIAASIPPDTPMLTS 365
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A3M1S9R5_9BACT (Response regulator (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1S9R5_9BACT) HSP 1 Score: 140 bits (353), Expect = 4.760e-36 Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = 1
Query: 4 LEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPS---QQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSSQEA 516
L +E++ V P+ + EV D L +A + L ++G +P TIQTDP L+Q L+NL+ NA+K T +G + +TL+ E S FRVSDTG+GI +Q +F+PF QAA +T+ K G G G I R+AELL G I +E + + S FT +A G LD VR+LS +EA
Sbjct: 203 LNVERVAVSPMALAAEVCDLLRARAERRGLKLELAVDGPIPRTIQTDPLRLRQILINLVDNAIKFTHQGGVTITLAVENSAGGNPRMAFRVSDTGIGIAAEQLSTLFRPFAQAATSTSRKFGGTGLGLAISRRLAELLGGTIEVESEPGQGSTFTVIVAAGRLDDVRLLSPEEA 376
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A517T7P5_9PLAN (Sensory/regulatory protein RpfC n=2 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517T7P5_9PLAN) HSP 1 Score: 138 bits (348), Expect = 3.820e-35 Identity = 69/163 (42.33%), Postives = 102/163 (62.58%), Query Frame = 1
Query: 4 LEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQV 492
L I V P+QI +V + +SE+ARA N + +E+ G VP IQ+DPT LKQAL+NL+ NA+K T G I +T+SC+ + + V+DTG+G+ +++ +F+PF QA ++TT G G G TI IAEL+ G++ + + S FT +ATGPL V
Sbjct: 253 LNINAETVSPVQIANDVKELMSERARARRNELTVELHGKVPALIQSDPTRLKQALLNLIGNAIKFTESGKITVTISCDYDAEKIQYEVADTGIGMNEEEQARIFKPFSQADSSTTRNYGGTGLGLTITKSIAELMGGDVTFNSASGQGSTFTLEVATGPLQDV 415
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: UPI001E31806E (CHASE domain-containing protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E31806E) HSP 1 Score: 139 bits (350), Expect = 5.850e-35 Identity = 73/175 (41.71%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 7 EIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRM---LSSQEAGE 522
+IE + P + R++ + +S++AR+ N + E G +P+TI+ D T LKQAL+NL+ NA+K T +G +++T C+ ++ F+V D+G+G+ +Q QHVFQPFRQA +TT K G G G TI RIAELL G+I +E + S FT +ATG + QV + L +Q+A +
Sbjct: 816 DIELRAMDPAETLRDIQELMSDRARSQENELVFERLGKLPQTIRCDSTRLKQALLNLVGNAIKFTKKGVVKVTAQCDFEREQLIFKVIDSGIGMSPEQLQHVFQPFRQADTSTTRKFGGTGLGLTITKRIAELLGGDITVESELGRGSTFTLGVATGDISQVSVSAPLETQDASK 990
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A3ZNN1_9BACT (Histidine kinase n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZNN1_9BACT) HSP 1 Score: 137 bits (344), Expect = 3.740e-34 Identity = 68/169 (40.24%), Postives = 109/169 (64.50%), Query Frame = 1
Query: 7 EIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSSQE 513
+IE + P ++ R+V + L+E+A N + +E++G +P+TI +D T LKQAL NL+ NA+K T G +++ C+ + + F+V D+G+G+ +Q + +FQPFRQA A+TT K G G G TI +IAELL G++R+E + S FT +ATG L + + SS++
Sbjct: 816 DIELRDMDPTEVIRDVHELLNERAITQENRLQIELKGALPQTIHSDSTRLKQALFNLVGNAIKFTQNGVVKVIAECDFAHEQMIFQVIDSGIGMSPEQLEQIFQPFRQADASTTRKFGGTGLGLTITKQIAELLGGDVRVESQSGVGSSFTLRVATGDLTKTPLRSSRD 984
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A2S8GS81_9BACT (Histidine kinase n=2 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GS81_9BACT) HSP 1 Score: 132 bits (331), Expect = 2.100e-32 Identity = 66/167 (39.52%), Postives = 104/167 (62.28%), Query Frame = 1
Query: 7 EIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPSQQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSS 507
+IE ++P + +V + LSE+A++ N + E G +P+ I+ D T LKQALVNL+ NA+K T +G + +T C+ +Q + V DTG+G+ +Q + +FQPFRQA A+TT K G G G TI +IAE+L G++ ++ + S FT +ATG L ++ +S
Sbjct: 880 DIELRNMNPADVMNDVEELLSERAKSQENRLVFETNGPLPKLIRCDSTRLKQALVNLVGNAIKFTKQGTVTVTAECDFERQQMFYHVRDTGIGMSPEQLKQIFQPFRQADASTTRKFGGTGLGLTITKQIAEMLGGDVTVKSEPGRGSTFTLRVATGDLTEISQQAS 1046
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Match: A0A286RBH2_9BACT (Sensory transduction histidine kinase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A286RBH2_9BACT) HSP 1 Score: 129 bits (324), Expect = 1.780e-31 Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 1
Query: 4 LEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTLLKQALVNLLTNALKLTTEGHIRLTLSCEPS---QQAFCFRVSDTGMGIPTDQRQHVFQPFRQAAATTTDKRGKAGSGFTIISRIAELLQGEIRLEQDASEHSEFTFAIATGPLDQVRMLSSQ 510
+E+E++ PI I ++VV L+ +AR N + LE++G +P+TIQ+DPT L+Q LVNL NA+K T EG + + + + + Q FRV DTG+G+ DQ +FQPFRQ A T + G G G I R+A LL G+I +E + + F +ATGPL+ + Q
Sbjct: 573 MEVERIPTDPIAIAQDVVHMLAGKAREKNLRLELEVKGAIPQTIQSDPTRLRQILVNLTDNAIKFTREGRVWIEIELDRTPVDQPVLEFRVCDTGVGMSPDQIGRLFQPFRQGEAGTYRQYGGTGLGLLISRRLARLLGGDISVESTPGKGTIFHVRVATGPLENTPFVDGQ 744 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123616.4836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123616.4836.1 >prot_M-pyrifera_M_contig123616.4836.1 ID=prot_M-pyrifera_M_contig123616.4836.1|Name=mRNA_M-pyrifera_M_contig123616.4836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp LLEIEKLQVHPIQIGREVVDQLSEQARALNNTIHLEIEGTVPETIQTDPTback to top mRNA from alignment at M-pyrifera_M_contig123616:1..522- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123616.4836.1 ID=mRNA_M-pyrifera_M_contig123616.4836.1|Name=mRNA_M-pyrifera_M_contig123616.4836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig123616:1..522- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123616:1..522- >mRNA_M-pyrifera_M_contig123616.4836.1 ID=mRNA_M-pyrifera_M_contig123616.4836.1|Name=mRNA_M-pyrifera_M_contig123616.4836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig123616:1..522- (Macrocystis pyrifera P11B4 male)back to top |