mRNA_M-pyrifera_M_contig123597.4831.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A847GEG7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GEG7_9BACT) HSP 1 Score: 242 bits (617), Expect = 6.590e-73 Identity = 114/174 (65.52%), Postives = 137/174 (78.74%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKLLGPG-YLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G+ AEW+PT DG W WKGDTSSDETDAQ+YYA VFY A E EK +VRDHVRRM +HIMDNGWVL D+DGKPTVW RWDPEYF + KG YA+GLNGLEIL+YLR A +TGD K+ + L+ RGY EEV+ QK + P +FHSDDRLAFYVYY ++Q ET+P++R +Y+R
Sbjct: 420 GFAAEWHPTPDGLWEWKGDTSSDETDAQYYYAWVFYQTAATEKEKEKVRDHVRRMTDHIMDNGWVLMDVDGKPTVWGRWDPEYF-NGKGKYAKGLNGLEILTYLRVAHAVTGDAKYLDAYNGLLERGYAEEVVHQKHVSPTPMIFHSDDRLAFYVYYGIMQTETEPFMRGVYRR 592
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A831UJS9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831UJS9_9BACT) HSP 1 Score: 223 bits (569), Expect = 1.420e-69 Identity = 106/173 (61.27%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKLLGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
GYPAEW PT DG W WK DTSSDET A FY AS+FY+L A++ K +V DH+ R+ +HI+ GWVLRDLDGKPT WARWDPEYF + +G ARGLNGLEILS++RTA ITGD K+ L+ GY + V++QK +FHSDDRLAFY Y+PL++YE DP LRSIY+R
Sbjct: 28 GYPAEWIPTPDGTWEWKADTSSDETCAHFYAASIFYELAADDEWKGRVEDHLTRIADHIVREGWVLRDLDGKPTRWARWDPEYFETPEGRAARGLNGLEILSHMRTAAQITGDAKYDDAYRTLLDYGYQDWVLKQKHTFKLSIFHSDDRLAFYAYHPLLKYEQDPALRSIYRR 200
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A7Y5C904_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C904_9BACT) HSP 1 Score: 221 bits (564), Expect = 3.410e-65 Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKL-LGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PAEW+ T DGKW WKGDTSSDETDA FY +F +LVANE EK + +H+RR+ HI+D+GW L D+DGKPT WARWDPEY + G YA+GLNGLE L+Y++T +T D KF L+ GYH V+R KL PG++FHSDDRLAFY YY +++YETDP +RSIY R
Sbjct: 417 GLPAEWHDTPDGKWQWKGDTSSDETDAHFYAVPIFIELVANEKEKARSIEHLRRIAAHIVDHGWTLHDVDGKPTRWARWDPEYLHTKLGFYAQGLNGLESLAYMQTTYALTKDTKFSDAYKALLDLGYHNAVLRTKLTFPPGFIFHSDDRLAFYAYYSMLKYETDPTMRSIYLR 590
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A7Y5FAJ9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FAJ9_9BACT) HSP 1 Score: 217 bits (553), Expect = 1.380e-63 Identity = 105/173 (60.69%), Postives = 124/173 (71.68%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKLLGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G P+EWNPT DGKW WKGDTSSDE DA +FY+LVA EK R+H+RR++ HI+DNGWVLRDLDGKPT WARWDPEY G ARGLNG+E LS + ITGD+KF A +L+ GYH EV+RQKL+ P + H DDRLAF Y+PL+ YE DP LRSIY+R
Sbjct: 425 GLPSEWNPTPDGKWLWKGDTSSDEVDAHMQSTMIFYELVAQGKEKDAAREHLRRIVGHIVDNGWVLRDLDGKPTRWARWDPEYLQRPYGYEARGLNGMEALSMVTLTHAITGDEKFNAARQQLLDWGYHNEVLRQKLVFP-VVTHFDDRLAFLAYHPLLTYERDPALRSIYRR 596
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A7V3DHR9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DHR9_9BACT) HSP 1 Score: 214 bits (544), Expect = 2.560e-62 Identity = 103/174 (59.20%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQK-LLGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PAEW+ D ++ WKGDTSSDETDA F+ A++F+DLVA EK + ++H+ R+ HI+DNGWVLRD+DG+PT WARWDP YF S G YARGLNGL +LSY+RTA ITGD KF+ LI GY E V+RQK P + DDRLAF++YY L++YETDP LRSIY+R
Sbjct: 420 GLPAEWHEAADTRFEWKGDTSSDETDAHFFAAAIFHDLVAEGPEKDRAKEHIARIAGHIVDNGWVLRDMDGQPTRWARWDPAYFDSPGGAYARGLNGLGVLSYMRTAAAITGDPKFEDAYRRLIDMGYAEYVLRQKHTFPPNMITRFDDRLAFFLYYNLLRYETDPRLRSIYRR 593
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A1V5KVL2_9BACT (Uncharacterized protein n=1 Tax=bacterium ADurb.Bin478 TaxID=1866932 RepID=A0A1V5KVL2_9BACT) HSP 1 Score: 203 bits (517), Expect = 2.640e-59 Identity = 96/174 (55.17%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKLLGPGYLF-HSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PAEW+ T D W WKGDTSSDE DA Y ++F LVAN+ E+ V DH+RR++ HI+DNG++LRD+DG+PT WARWDP Y + G YARGLNGLE+ +YL A+H TGD+KF A + +GY ++++RQKL P + H DDRLAFY YYPLIQ+ETD L++++ R
Sbjct: 278 GLPAEWHITADSVWEWKGDTSSDEIDAHVYETTIFLSLVANDKEREWVVDHLRRVIGHIVDNGFILRDVDGEPTRWARWDPAYLQTPYGYYARGLNGLELFNYLTAALHFTGDEKFAAAKRVHLAQGYLKDILRQKLTFPPSSYTHFDDRLAFYSYYPLIQFETDEELKALWLR 451
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A850AVX4_9BACT (Uncharacterized protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A850AVX4_9BACT) HSP 1 Score: 202 bits (515), Expect = 4.160e-58 Identity = 97/174 (55.75%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKL-LGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PA+W P+DDG WSWKGDTSSDE + Y S+F+DLVA EK + + H+ R+ HI+DNGWVLRD+DGKPT W RWDP+Y G ARGLNG+E +Y+ TA+ +TGD ++QAGLD+L+ YH +RQKL P + DD LAF Y PLI Y DPYLRSIY R
Sbjct: 426 GLPAKWYPSDDGLWSWKGDTSSDEVNGHMYSVSLFHDLVARGAEKERAKQHIARLSTHIIDNGWVLRDMDGKPTRWGRWDPDYLLKPYGFEARGLNGMEAQTYMITALGLTGDPRYQAGLDQLMKWRYHTYTVRQKLTFPPDMVVPWDDELAFRCYLPLITYCKDPYLRSIYLR 599
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A2V5PLD8_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2V5PLD8_9BACT) HSP 1 Score: 196 bits (499), Expect = 4.930e-58 Identity = 93/174 (53.45%), Postives = 118/174 (67.82%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKL-LGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PA+W PT+DG W WKGDTSSDE + Y S+F+DL A EK + R H+ + +HIM+NGWVLRD+DGKPT W RWDPEY G+ +RGLNG+E +Y+ TA+ +TGD KFQ GL +LI YH +RQK+ P + DD LAF Y+PL++Y DP LRSIY R
Sbjct: 118 GLPAKWYPTEDGLWLWKGDTSSDEVNGHMYAVSLFHDLAAKGAEKERARQHIANIASHIMENGWVLRDMDGKPTRWGRWDPEYLQRPYGSDSRGLNGMEAQTYMHTALALTGDAKFQQGLQQLIKWRYHTYTVRQKVTFPPEQVVPWDDELAFRCYHPLLRYAKDPELRSIYLR 291
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A847JVT3_9BACT (Uncharacterized protein n=1 Tax=Chthonomonadales bacterium TaxID=2282151 RepID=A0A847JVT3_9BACT) HSP 1 Score: 200 bits (508), Expect = 5.600e-57 Identity = 96/174 (55.17%), Postives = 119/174 (68.39%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKL-LGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PA+W PT DG W WKGDTSSDE + Y S+F+DLVA EK + RDH+ R+ HI++NGWVLRD+DGKPT W RWDP+Y G A GLNG+E +Y+ TA+ +TGD K++AGLD+L+ YH +RQKL P + DD LAF Y PLI Y TDP+LRSIY R
Sbjct: 456 GLPAKWYPTPDGLWQWKGDTSSDEVNGHMYSVSLFHDLVAKGDEKTRARDHIARIATHIIENGWVLRDMDGKPTRWGRWDPDYLLKPYGFEAVGLNGMEAQTYMITAMALTGDPKYKAGLDQLLKWRYHMYTVRQKLTFPPDVVVPWDDELAFRCYVPLISYATDPHLRSIYLR 629
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Match: A0A2N9NEJ4_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A2N9NEJ4_9BACT) HSP 1 Score: 193 bits (490), Expect = 2.130e-54 Identity = 92/174 (52.87%), Postives = 118/174 (67.82%), Query Frame = 1
Query: 1 GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDHVRRMMNHIMDNGWVLRDLDGKPTVWARWDPEYFASDKGNYARGLNGLEILSYLRTAIHITGDKKFQAGLDELIGRGYHEEVIRQKL-LGPGYLFHSDDRLAFYVYYPLIQYETDPYLRSIYQR 519
G PA+W PT DG W WKGDTSSDE +A Y S+FY+L A EK R H+ ++ ++IMDNGWVLRDLDGKPT W RWDP+Y G +RGLNG+E +Y+ TA +TGD K+Q GL++L+ YH +RQ+L P + DD LAF+ Y+PL++Y DP LRSIY R
Sbjct: 456 GLPAKWYPTADGLWFWKGDTSSDEVNAHMYAVSLFYELAAKGPEKELARQHIAKIASYIMDNGWVLRDLDGKPTRWGRWDPDYLLRPYGFESRGLNGMEAQTYMHTAYALTGDAKYQRGLEQLLKWRYHTYTVRQRLTFPPDAVAPWDDELAFFCYHPLLRYAKDPELRSIYLR 629 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123597.4831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123597.4831.1 >prot_M-pyrifera_M_contig123597.4831.1 ID=prot_M-pyrifera_M_contig123597.4831.1|Name=mRNA_M-pyrifera_M_contig123597.4831.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp GYPAEWNPTDDGKWSWKGDTSSDETDAQFYYASVFYDLVANETEKVQVRDback to top mRNA from alignment at M-pyrifera_M_contig123597:3..521- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123597.4831.1 ID=mRNA_M-pyrifera_M_contig123597.4831.1|Name=mRNA_M-pyrifera_M_contig123597.4831.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=519bp|location=Sequence derived from alignment at M-pyrifera_M_contig123597:3..521- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123597:3..521- >mRNA_M-pyrifera_M_contig123597.4831.1 ID=mRNA_M-pyrifera_M_contig123597.4831.1|Name=mRNA_M-pyrifera_M_contig123597.4831.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1038bp|location=Sequence derived from alignment at M-pyrifera_M_contig123597:3..521- (Macrocystis pyrifera P11B4 male)back to top |