mRNA_M-pyrifera_M_contig123595.4830.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: A0A5A8DDS2_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDS2_CAFRO) HSP 1 Score: 63.2 bits (152), Expect = 3.150e-9 Identity = 35/94 (37.23%), Postives = 49/94 (52.13%), Query Frame = 1
Query: 52 HAEFVRREGNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKTRAIPKAKEAIEAL 333
H E V GN+C L + + LH A A D F +AI +T+ A GCN SR C+ G +LGA GT+ VP W +TR + + +A+
Sbjct: 295 HQEVVDELGNTCKLMNSMQTPLHAAAAASPDKAAMD-CFVEAIRATMVARGCNCSRLCIAGAVLGASLGTSAVPEDWTARTREAEDIRRSADAI 387
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: A0A553NEN5_TIGCA (Uncharacterized protein n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553NEN5_TIGCA) HSP 1 Score: 58.9 bits (141), Expect = 9.070e-8 Identity = 37/97 (38.14%), Postives = 50/97 (51.55%), Query Frame = 1
Query: 19 VKRALASIDE----DHAEFVRRE-GNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKT 294
V R+L +++ DH + V+ G+ C+ PG ALH E F +A+ STIRA GCN SRS IG GA+ G +P W+EKT
Sbjct: 239 VYRSLGVVEDKLGLDHVQAVQTVFGSPCYNPGSFQGALHAFQREES--------FPEAVRSTIRAGGCNCSRSLFIGACAGAKHGLDAIPMEWLEKT 327
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: UPI000A7D7B78 (ADP-ribosylglycohydrolase family protein n=1 Tax=Pelagibacter ubique TaxID=198252 RepID=UPI000A7D7B78) HSP 1 Score: 57.0 bits (136), Expect = 1.110e-7 Identity = 35/103 (33.98%), Postives = 51/103 (49.51%), Query Frame = 1
Query: 7 VVEAVKRALASIDEDHAEFVRREGNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKTRAIPKAK 315
+VE + E H++ V++ G +C PG S++H L ++ + AI TI+A GCN SRS IG A G +P AW++KT IP K
Sbjct: 65 IVEDINLLKKLKKEPHSKIVKKFGMACSYPGTFNSSIHAILSSKN--------YKSAILKTIKAGGCNCSRSNFIGAYFSALKGVGTIPKAWIKKT--IPAKK 157
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: V4AC05_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AC05_LOTGI) HSP 1 Score: 55.8 bits (133), Expect = 1.090e-6 Identity = 30/96 (31.25%), Postives = 51/96 (53.12%), Query Frame = 1
Query: 7 VVEAVKRALASIDEDHAEFVRREGNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKT 294
+ E +++ L + DH G +C++PG L +ALH + + +A AI +TI+A GC+ASRS +IG + + G +P W ++T
Sbjct: 225 LAEYLQQVLDNKSTDHTAAANNFGKACYVPGNLQTALHSIVTYDN--------YATAIRATIKAGGCSASRSNLIGACIAVQCGLESIPETWWQRT 312
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: UPI000359B039 (crystallin J1C n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359B039) HSP 1 Score: 55.8 bits (133), Expect = 1.090e-6 Identity = 33/89 (37.08%), Postives = 45/89 (50.56%), Query Frame = 1
Query: 31 LASIDEDHAEFVRREGNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKTR 297
L + H E V SC LPG L SA+HG L + ++ +TIRA GCNASRS IG A+ G +P +W ++T+
Sbjct: 237 LKASSTSHVEAVPTFKKSCQLPGSLQSAMHGVLTVPG--------YVDSVRTTIRAGGCNASRSGFIGACRAAQEGFDAIPESWRQRTK 317
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: A0A8K0A9F3_BRALA (Hypp4567 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8K0A9F3_BRALA) HSP 1 Score: 51.2 bits (121), Expect = 5.270e-6 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 1
Query: 88 HLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKT 294
+LP L SA+HG + E + AI +TIRA GCN+SRS +IG GA+ G +P W KT
Sbjct: 18 YLPKSLQSAVHGVVTGED--------YVSAIRTTIRAGGCNSSRSSIIGACFGAQVGVEGIPADWRAKT 78
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: C3Y2Y9_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y2Y9_BRAFL) HSP 1 Score: 53.5 bits (127), Expect = 6.620e-6 Identity = 33/92 (35.87%), Postives = 48/92 (52.17%), Query Frame = 1
Query: 22 KRALASIDEDHAEFVRRE-GNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKT 294
+++ +D+ F+++ N LP L SA+HG + G + AI +TIRA GCNASRS +IG GA+ G +P W KT
Sbjct: 191 RKSPTDLDQAMVSFLQKVLDNRDDLPKSLQSAVHGVV--------TGGDYVSAIRTTIRAGGCNASRSSIIGACFGAQVGVEGIPADWKAKT 274
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: A0A7V8TXU5_9PROT (ADP-ribosylglycohydrolase n=1 Tax=Pelagibacterales bacterium TaxID=2026776 RepID=A0A7V8TXU5_9PROT) HSP 1 Score: 52.4 bits (124), Expect = 1.770e-5 Identity = 28/96 (29.17%), Postives = 47/96 (48.96%), Query Frame = 1
Query: 4 EVVEAVKRALASIDEDHAEFVRREGNSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEK 291
+V++ +K + + H + V++ G +C PG S++H + + + AI TIRA GCN SRS +G A G + +P W+ K
Sbjct: 217 DVIKGIKMVKRNKFKSHNKMVKKLGITCRYPGTFLSSIHAIITSNS--------YKSAILKTIRAGGCNCSRSNFVGAYFAAIHGLSSIPTKWISK 304
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Match: A0A6P5AKG8_BRABE (crystallin J1C-like n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P5AKG8_BRABE) HSP 1 Score: 50.8 bits (120), Expect = 6.280e-5 Identity = 31/72 (43.06%), Postives = 40/72 (55.56%), Query Frame = 1
Query: 79 NSCHLPGGLASALHGALHAEKHFGGADGVFAKAISSTIRATGCNASRSCVIGTLLGARFGTAIVPPAWVEKT 294
N+ LP L SA+HG + G D + A+ +TIRA GCNASRS +IG GA+ G +P W KT
Sbjct: 244 NTGDLPKSLQSAVHGVVT------GRD--YVSAVRATIRAGGCNASRSSIIGACFGAQVGVEGIPADWKAKT 307 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123595.4830.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123595.4830.1 >prot_M-pyrifera_M_contig123595.4830.1 ID=prot_M-pyrifera_M_contig123595.4830.1|Name=mRNA_M-pyrifera_M_contig123595.4830.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp EEVVEAVKRALASIDEDHAEFVRREGNSCHLPGGLASALHGALHAEKHFGback to top mRNA from alignment at M-pyrifera_M_contig123595:54..407+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123595.4830.1 ID=mRNA_M-pyrifera_M_contig123595.4830.1|Name=mRNA_M-pyrifera_M_contig123595.4830.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=354bp|location=Sequence derived from alignment at M-pyrifera_M_contig123595:54..407+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123595:54..407+ >mRNA_M-pyrifera_M_contig123595.4830.1 ID=mRNA_M-pyrifera_M_contig123595.4830.1|Name=mRNA_M-pyrifera_M_contig123595.4830.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig123595:54..407+ (Macrocystis pyrifera P11B4 male)back to top |