mRNA_M-pyrifera_M_contig123589.4829.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: UPI001BA3F253 (CPBP family intramembrane metalloprotease n=2 Tax=Carboxylicivirga TaxID=1628153 RepID=UPI001BA3F253) HSP 1 Score: 72.4 bits (176), Expect = 2.840e-13 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAK--------TTGLATLDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M LE S G N+ KY ++I++ F+GGQ G IPLL T + ++DF MG++S+ GLAL+ILPFI+SLVL V L K
Sbjct: 1 MKHLESSYTGQNEWWKYLLLILISFLGGQFFGAIPLLVVLAWAGSGNIDTAAVQSMDFAAMGINSSLGLALIILPFILSLVLFVVLFK 88
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: X5E3Q3_9BACT (Uncharacterized protein n=1 Tax=Draconibacterium orientale TaxID=1168034 RepID=X5E3Q3_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 1.430e-11 Identity = 42/90 (46.67%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLL-----QFAKTTG-LAT----LDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M L ++ DG NQ KY +VIIV I GQI+G IPL+ A G +AT +D G+D N GLALM++PFIV LVL + L+K
Sbjct: 1 MKHLTRAFDGQNQWWKYLVVIIVAVIVGQIVGAIPLIVVIGVSVAMNGGQVATPENAMDLSAYGIDPNLGLALMVIPFIVMLVLAIVLIK 90
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A6I6K1R0_9BACT (CPBP family intramembrane metalloprotease n=2 Tax=Maribellus TaxID=2678352 RepID=A0A6I6K1R0_9BACT) HSP 1 Score: 63.9 bits (154), Expect = 3.610e-10 Identity = 36/91 (39.56%), Postives = 51/91 (56.04%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAKTTGLAT-----------LDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M LE +L NQ KY +V+++GF+GGQI+G IPL+ A G A +D G+D N GL LM+ PF+V L + + L+K
Sbjct: 1 MKHLESALKQENQWWKYLLVLLIGFLGGQIIGAIPLVV-AMGIGAARNGGNIVTPDNPMDLSAYGIDPNLGLVLMVFPFLVMLFISILLIK 90
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A0D8J976_9BACT (Uncharacterized protein n=2 Tax=Draconibacterium TaxID=1471399 RepID=A0A0D8J976_9BACT) HSP 1 Score: 63.2 bits (152), Expect = 6.690e-10 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLL-----QFAKTTG-LAT----LDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M L ++ DG NQ K+ +VI+V GQI+G IPL+ AK G +AT +D G++ + GLALM++PFIV+LVL + L+K
Sbjct: 1 MKHLSRAFDGENQWWKFVVVILVALGVGQIVGAIPLIVVMGISIAKNGGQVATPENPMDLSAYGINPSLGLALMVIPFIVTLVLAIVLIK 90
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A6C0RG06_9BACT (CPBP family intramembrane metalloprotease n=1 Tax=Draconibacterium halophilum TaxID=2706887 RepID=A0A6C0RG06_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 1.290e-9 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLL-----QFAKTTG-LAT----LDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M L ++ DG NQ K+ +V++V I GQI+G IPL+ A G +AT +D G++ + GLALM++PFIV+LVL + L+K
Sbjct: 1 MKHLSRAFDGQNQWWKFLVVMVVAVIVGQIIGAIPLIVVMGVSIAMNGGQVATPENPMDLAAYGINPSLGLALMVIPFIVTLVLAIVLIK 90
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A425XXK6_9BACT (CPBP family intramembrane metalloprotease n=1 Tax=Ancylomarina euxinus TaxID=2283627 RepID=A0A425XXK6_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 1.740e-9 Identity = 33/89 (37.08%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPL---LQFAKTTGLATL------DFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M LE++ G N +Y +V ++ F+G Q++G +PL + F +G T+ DF ++G+D N GLALMIL FI+ L + V ++K
Sbjct: 1 MKHLERAFIGPNHWWRYILVTLIAFVGAQVIGALPLGMVMMFYTLSGKGTINPENQMDFTSLGIDPNIGLALMILSFIIGLTIFVLILK 89
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A5M8P004_9BACT (Uncharacterized protein n=1 Tax=Candidatus Ordinivivax streblomastigis TaxID=2540710 RepID=A0A5M8P004_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 1.050e-7 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAKTTGLATLDFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M FLE++ DG NQ KYA+V + G++GGQ++G+IPLL +A L TM L L++L VSL V L+K
Sbjct: 1 MKFLERAFDGQNQFWKYAVVCLGGYLGGQLIGSIPLLGVLTYKEIADLSKNTM-------LFLLLLSVAVSLFCIVFLIK 73
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: UPI001BAD3FDF (CPBP family intramembrane metalloprotease n=1 Tax=Carboxylicivirga linearis TaxID=1628157 RepID=UPI001BAD3FDF) HSP 1 Score: 55.5 bits (132), Expect = 3.890e-7 Identity = 34/88 (38.64%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 1 MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAKTT--GLATL------DFETMGLDSNFGLALMILPFIVSLVLCVGLVK 240
M LE +L N Y ++I+V F Q++G IPL T G+ L DF ++G++S+FGLAL+++PFIVS LVK
Sbjct: 1 MKHLESALKTKNDWWAYLVIIVVSFFIAQVVGGIPLGIVLATADGGMQALSEGNVIDFTSLGINSSFGLALIVIPFIVSFFTLKALVK 88
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: A0A7C1MGN8_9BACT (CPBP family intramembrane metalloprotease n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C1MGN8_9BACT) HSP 1 Score: 53.5 bits (127), Expect = 1.910e-6 Identity = 29/82 (35.37%), Postives = 41/82 (50.00%), Query Frame = 1
Query: 7 FLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAKTTGLAT-----------LDFETMGLDSNFGLALMILPFIVSLV 219
F E +L G N +Y ++ +V F +G +PL+ G+A +D G+DSN GL LMILPFIV L+
Sbjct: 2 FFESALAGKNAFWRYFVIFVVVFAATNTIGALPLIIVIVMKGIANPEILDNNPENLMDLSVYGIDSNTGLVLMILPFIVGLI 83
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Match: UPI001431BF34 (CPBP family intramembrane metalloprotease n=1 Tax=Maribellus sediminis TaxID=2696285 RepID=UPI001431BF34) HSP 1 Score: 50.8 bits (120), Expect = 1.750e-5 Identity = 30/88 (34.09%), Postives = 46/88 (52.27%), Query Frame = 1
Query: 10 LEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLL------------QFAKTTGLATLDFETMGLDSNFGLALMILPFIVSLVLCVGLV 237
LE++ + NQ KY IV ++ Q +G+IPL+ F K +DF G+D NFGL LM++PF+V V+ + L+
Sbjct: 5 LERAFNQENQIWKYVIVFLLSLFISQTVGSIPLVITLVIKIAQNGSDFVKPEN--PMDFGAYGIDPNFGLILMLIPFVVMFVVSMFLI 90 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123589.4829.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123589.4829.1 >prot_M-pyrifera_M_contig123589.4829.1 ID=prot_M-pyrifera_M_contig123589.4829.1|Name=mRNA_M-pyrifera_M_contig123589.4829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp MNFLEQSLDGNNQAGKYAIVIIVGFIGGQILGTIPLLQFAKTTGLATLDFback to top mRNA from alignment at M-pyrifera_M_contig123589:284..523+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123589.4829.1 ID=mRNA_M-pyrifera_M_contig123589.4829.1|Name=mRNA_M-pyrifera_M_contig123589.4829.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=240bp|location=Sequence derived from alignment at M-pyrifera_M_contig123589:284..523+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123589:284..523+ >mRNA_M-pyrifera_M_contig123589.4829.1 ID=mRNA_M-pyrifera_M_contig123589.4829.1|Name=mRNA_M-pyrifera_M_contig123589.4829.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig123589:284..523+ (Macrocystis pyrifera P11B4 male)back to top |