mRNA_M-pyrifera_M_contig12342.4796.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12342.4796.1
Unique NamemRNA_M-pyrifera_M_contig12342.4796.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A6H5JHV3_9PHAE (GT1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHV3_9PHAE)

HSP 1 Score: 488 bits (1256), Expect = 1.180e-168
Identity = 252/376 (67.02%), Postives = 293/376 (77.93%), Query Frame = 1 
Query:    7 VRNMP----LQISDHLTWAGASAAETHGIQHACHATWPLAMLEECGILPARSLSSLVRITVRRIRSCRLAPAFLKPPGPTRRLLDSVRRQCLGA--GGGGLVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDAHGVVVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARAAEAAGFAARPHP-SSSGVAFFKFWKKDTGPKYTAGAIRDAVLRAVQDPDLSEGARRAQRAVLAAGYGRTAVTAVESACLYGVDHFVEREGG-KSKPGSGPTLWAVAGGVMAGVVVSG 1110
            V+ MP    + ISDHLTWAGA+AA   G++HACH  WPL MLE+CG LPARSLSS++    R +RS RLAPAFLKPPGP R +LD VR+QCLG   G  GLVLV +SFGIEPPR LPP +KV+GRGH PET +AL EHPEL+TFLD++  VVYVTFGSR+ PPP+LVRTV EGLV GGWAVVWSLK A+ASHLP AALASGRFFVRPWLPQGAALAHP+++ AVTHCGMGGL+ECAVNAVP+VPLPFSLSADQPVNA  AEAAGFA RP P S     F KFW++   P+Y   AI DAVL+ ++DP L+EGA RA+RA LAAGYGR AV AVES CL+G D+     GG  +  G+  TL  + GGV+ G V+SG
Sbjct:   86 VKGMPRAPDMIISDHLTWAGANAARIVGVKHACHVAWPLFMLEQCGFLPARSLSSVLGAAARALRSSRLAPAFLKPPGPPRAMLDRVRQQCLGVEEGSAGLVLV-NSFGIEPPRALPPCLKVIGRGHLPETVEALEEHPELKTFLDSNDAVVYVTFGSRVTPPPSLVRTVAEGLVTGGWAVVWSLKEADASHLPPAALASGRFFVRPWLPQGAALAHPHVKVAVTHCGMGGLYECAVNAVPIVPLPFSLSADQPVNAAIAEAAGFAVRPRPLSRRATDFLKFWQRRGDPEYAPAAIYDAVLKILRDPSLAEGAGRAKRAALAAGYGRVAVDAVESTCLFGADNLPAENGGIGNAAGATQTLRGIVGGVVFGAVLSG 460
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BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A2V7U496_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7U496_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 2.200e-18
Identity = 77/247 (31.17%), Postives = 115/247 (46.56%), Query Frame = 1 
Query:  289 LVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDAHGVVVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAA-LAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARAAEAAGFAARPHPSSSGVAFFKFWKKDTGPKYTAGAIRDAVLRAVQDPDLSEGARRAQRAVLAAGYGRTAVTAVESACLYGVDHFVER 1026
            LVLV S+FG+E PR LPP +++VG    PE  D+L E  +  ++L     VVY   G+        +  +GEG  A  + V+W L++++ + LP  A       V  W+P     LAHPN++A V+HCG+  + E      P+V +P  L  DQ          GF  R   +  G++  K        + T+  +R A+ R + D          Q +   AG  R A   +E     GV H+VER
Sbjct:  228 LVLVNSAFGLEYPRPLPPLIQMVGP-MLPEVIDSLPE--DYASWLSEGPPVVYANLGTVALASERFLSVLGEGFAAEDFRVLWGLRQSQHALLP--ARLPDNLRVEAWVPSPVGILAHPNVKAFVSHCGINSVHESLHAGTPIVGIP--LFGDQ-------RDMGF--RVQDAGVGLSLDK-------SRLTSADLRQAIRRVLSDASFGRRIPAIQSSFALAGGVRRAADLIEHLAAVGVAHYVER 451
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BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: UPI0016801846 (glycosyltransferase n=1 Tax=Anabaena sp. FACHB-1237 TaxID=2692769 RepID=UPI0016801846)

HSP 1 Score: 88.6 bits (218), Expect = 1.110e-15
Identity = 76/248 (30.65%), Postives = 113/248 (45.56%), Query Frame = 1 
Query:  289 LVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLD---AHGVVVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARAAEAAGFAARPHPSSSGVAFFKFWKKDTGPKYTAGAIRDAVLRAVQDPDLSEGARRAQRAVLAAGYGRTAVTAVESACLYGVDHFVE 1023
            L++V +SFGIE PR +PPFV++VG      T+   +  P L T+L+   A   ++YV FG+         + +  GL      V+WSL      HLP        F +  ++PQ   LAHPN+RA V+HCGM  + E    A P++ LPF    DQ  NA         AR      G+   K        K+ +  +   +   + +    E A R    +  +G    AV  VE   L G+D+F++
Sbjct:  211 LIIVGTSFGIEIPRKIPPFVQMVGPIFPKITS---SPSPSLSTWLEDKEAANGIIYVAFGTLAEINKWQCQVLVTGLKNTKLKVLWSLPTNNHHHLPDL---PDSFRIENFVPQQTVLAHPNVRAFVSHCGMNSINESLYFAKPILALPFF--GDQHYNA---------ARIVDIGVGLKLNK-------QKFDSTEVTTKINHLLTNSTYKEAANRMSDVLKNSGGLNKAVDIVEKMLLEGIDYFIK 434
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BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A8J2JSA4_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JSA4_9HEXA)

HSP 1 Score: 75.1 bits (183), Expect = 3.600e-11
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1 
Query:  325 PRTLPPFVKVVGRGHRPETADALAEHPELETFLD-AHGVVVYVTFGSRIP---PPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARAAEAAGFAAR 792
            PR+LPP+V  VG  H  E  D L +   LE F++ +    VY++FGS +     PP +     E +       +W   + E  +LP  +      F++ W+PQ A LAHP I+A VTH G+  + E   N VPLV LP  + ++Q  NA      G+  R
Sbjct:  215 PRSLPPYVIPVGGMHIKENVDPLPK--TLENFINGSEKGFVYISFGSSVQISKAPPEIYGAFIEAIKRIKVNFIW---KWEGDNLP--SNLPSNVFMQKWMPQQALLAHPKIKAFVTHSGLMSIQEAIFNGVPLVSLP--VFSEQDYNAERVHTGGYGIR 365
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A812GYS0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812GYS0_9DINO)

HSP 1 Score: 74.3 bits (181), Expect = 6.340e-11
Identity = 49/151 (32.45%), Postives = 77/151 (50.99%), Query Frame = 1 
Query:  283 GGLVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDA--HGV-VVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLP 726
            G L  V S  G + P+ LPP V+  G     +  +   E  E+E++L+A   G+ VVYV+FG+ +   P  V  +   L +  +  +W+L +++  HLP    +S    +  W+P   +LAHP ++A V+HCG     EC     PLV  P
Sbjct:  215 GHLTFVNSIPGFDYPQLLPPLVQYTGPVVDVKKMEPFPE--EVESWLEAVPEGMPVVYVSFGTVVRLTPERVAAMLSTLTSTEYFTLWALPKSQQVHLPDTLPSS--VMIHHWVPTVRSLAHPKVKAFVSHCGGNSAVECMAMGKPLVGYP 361
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A8J2NV09_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2NV09_9HEXA)

HSP 1 Score: 72.8 bits (177), Expect = 7.040e-11
Identity = 52/149 (34.90%), Postives = 77/149 (51.68%), Query Frame = 1 
Query:  328 RTLPPFVKVVGRGHRPETADALAEHPELETFLDAHGVV--VYVTFGS--RIPPPPALVRTVG-EGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNA 759
            R+LPP V  +G  H  +T   L   P+LE F++  G    VYV+FGS  +I   P   R++  + L       +W  +    S +P         FV+ W+PQ A LAHP I+A +TH G+ G+ E   + VPL+ +P  + A+Q  NA
Sbjct:    3 RSLPPLVVPIGGMHCEDTTQTLT--PDLEQFINESGDAGFVYVSFGSAAKISKAPEEFRSMFYKSLENSRLRFIWKYEGERTSDIPP------NVFVKNWMPQQAILAHPKIKAFLTHGGLLGMQEAVWHGVPLLAMP--IFAEQDYNA 141
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A812RYK0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812RYK0_9DINO)

HSP 1 Score: 74.3 bits (181), Expect = 8.140e-11
Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 1 
Query:  283 GGLVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHP---ELETFLDA--HGV-VVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLP 726
            G L  V S  G + P+ LPP V+  G        D     P   E+E++L+A   G+ VVYV+FG+ +   P  V  +   L +  +  +W+L + +  HLP A  +S    +  W+P   +LAHP ++A V+HCG     EC     PLV  P
Sbjct:  215 GHLTFVNSIPGFDYPQLLPPLVQYTG-----PVVDVKKMEPFPKEVESWLEAVPDGMPVVYVSFGTVVRLTPERVAAMLSTLTSTEYFTLWALPKPQQVHLPDALPSS--VMIHHWVPTVRSLAHPKVKAFVSHCGGNSAVECMAMGKPLVGYP 361
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A812RDD8_9DINO (UGT74C1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812RDD8_9DINO)

HSP 1 Score: 73.2 bits (178), Expect = 2.040e-10
Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 1 
Query:  283 GGLVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDA--HGV-VVYVTFGSRIPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLP 726
            G L  V S  G + P+ LPP V+  G     +  +   E  E+E++L+A   G+ VVYV+FG+ +   P  V  +   L +  +  +W+L + +  HLP    +S    +  W+P   +LAHP ++A V+HCG     EC     PLV  P
Sbjct:  215 GHLTFVNSIPGFDYPQLLPPLVQYTGPVVDVKKMEPFPE--EVESWLEAVPDGMPVVYVSFGTVVRLTPERVAAMLSTLTSTEYFTLWALPKPQQVHLPDTLPSS--VMIHHWVPTVRSLAHPKVKAFVSHCGGNSAVECMAMGKPLVGYP 361
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: A0A137NVQ0_CONC2 (Glycosyltransferase family 1 protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NVQ0_CONC2)

HSP 1 Score: 72.4 bits (176), Expect = 3.250e-10
Identity = 52/183 (28.42%), Postives = 89/183 (48.63%), Query Frame = 1 
Query:  277 GGGGLVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDAHGVVVYVTFGSRIPPPPALV--------RTVGEGLVAGGWAVVWSLKRAEASHLPR-----------AALASG---RFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNA 759
            G  G+ +  S  G+E  R++P  +  VG     ++ D+L    +L++F+D HG V+Y+ FG+ I  P   +        R + EG++ G   +VW + + +  +LP+           A +  G      V  W PQ + L H N +  ++H G+  ++E     VP++ +PF   ADQP NA
Sbjct:  200 GHMGIGIANSYVGLENARSIPSHIFPVGPI---QSHDSLDLPEDLQSFMDNHGKVLYIAFGTMIRLPQGEIAKFLEIFHRAINEGVLDG---IVWGMPKNDLKYLPKFYTVDSNEYSTARIIEGTHDNIKVLNWAPQKSILNHKNTKIFISHGGLDSIYESMDAGVPMMLIPFY--ADQPRNA 374
[Close]
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Match: UPI001D0766D0 (UDP-glucosyltransferase 2-like isoform X4 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0766D0)

HSP 1 Score: 71.2 bits (173), Expect = 7.710e-10
Identity = 59/171 (34.50%), Postives = 86/171 (50.29%), Query Frame = 1 
Query:  289 LVLVTSSFGIEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDA--HGVVVYVTFGSRIPPPPA---LVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWLPQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARAAEAAGFA 786
            LVLV S   IEPPR   P +  +G G   +TA  L +  +L+ +LD+   G +++ +FG+ +         ++ + EGL       V      E  + P+  L S       WLPQ   LAHPNI+A +TH G+GG  E   + VP++ +P  L ADQ  N   A  AG+A
Sbjct:  240 LVLVNSHLSIEPPRPYVPNMVQIG-GFYAQTAKKLPD--DLQKYLDSAKEGAILF-SFGTNMKIKDMDEDKLKAILEGLRKIAPMKVVFKSEIELKNAPKNVLVS------KWLPQNDILAHPNIKAFITHGGLGGNTESVYHGVPMIGIP--LFADQKSNVENAVQAGYA 398
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12342.4796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHV3_9PHAE1.180e-16867.02GT1 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
A0A2V7U496_9BACT2.200e-1831.17Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]
UPI00168018461.110e-1530.65glycosyltransferase n=1 Tax=Anabaena sp. FACHB-123... [more]
A0A8J2JSA4_9HEXA3.600e-1134.38Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A812GYS0_9DINO6.340e-1132.45Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A8J2NV09_9HEXA7.040e-1134.90Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
A0A812RYK0_9DINO8.140e-1133.12Hypothetical protein n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A812RDD8_9DINO2.040e-1032.45UGT74C1 protein n=2 Tax=Symbiodinium TaxID=2949 Re... [more]
A0A137NVQ0_CONC23.250e-1028.42Glycosyltransferase family 1 protein n=1 Tax=Conid... [more]
UPI001D0766D07.710e-1034.50UDP-glucosyltransferase 2-like isoform X4 n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12342contigM-pyrifera_M_contig12342:5182..9047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score493.8
Seed ortholog evalue6.8e-137
Seed eggNOG ortholog2880.D7FVF1
KEGG rclassRC00005,RC00033,RC00049,RC00059,RC00078,RC00171,RC00397,RC00523,RC00529,RC00708,RC02748
KEGG koko:K00699
KEGG ReactionR01383,R02358,R02389,R02478,R02502,R02902,R03091,R04352,R04353,R04354,R04683,R07106,R08259,R08261,R08262,R08263,R08615,R09426,R09427,R09428
KEGG Pathwayko00040,ko00053,ko00140,ko00830,ko00860,ko00980,ko00982,ko00983,ko01100,ko01110,ko05204,map00040,map00053,map00140,map00830,map00860,map00980,map00982,map00983,map01100,map01110,map05204
KEGG ModuleM00014,M00129
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transferase activity, transferring hexosyl groups
EggNOG OGsKOG1192@1,KOG1192@2759
EC2.4.1.17
COG Functional cat.G
CAZyGT1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons5
Model size1110
Cds size1095
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12342.4796.1prot_M-pyrifera_M_contig12342.4796.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12342 5182..9032 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815752.8267498-CDS-M-pyrifera_M_contig12342:5181..52991622815752.8267498-CDS-M-pyrifera_M_contig12342:5181..5299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 5182..5299 -
1692277553.0600936-CDS-M-pyrifera_M_contig12342:5181..52991692277553.0600936-CDS-M-pyrifera_M_contig12342:5181..5299Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 5182..5299 -
1622815752.8392327-CDS-M-pyrifera_M_contig12342:5987..63221622815752.8392327-CDS-M-pyrifera_M_contig12342:5987..6322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 5988..6322 -
1692277553.073649-CDS-M-pyrifera_M_contig12342:5987..63221692277553.073649-CDS-M-pyrifera_M_contig12342:5987..6322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 5988..6322 -
1622815752.8515494-CDS-M-pyrifera_M_contig12342:6653..67361622815752.8515494-CDS-M-pyrifera_M_contig12342:6653..6736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 6654..6736 -
1692277553.0834844-CDS-M-pyrifera_M_contig12342:6653..67361692277553.0834844-CDS-M-pyrifera_M_contig12342:6653..6736Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 6654..6736 -
1622815752.861164-CDS-M-pyrifera_M_contig12342:7236..73961622815752.861164-CDS-M-pyrifera_M_contig12342:7236..7396Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 7237..7396 -
1692277553.0934646-CDS-M-pyrifera_M_contig12342:7236..73961692277553.0934646-CDS-M-pyrifera_M_contig12342:7236..7396Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 7237..7396 -
1622815752.8731976-CDS-M-pyrifera_M_contig12342:8633..90321622815752.8731976-CDS-M-pyrifera_M_contig12342:8633..9032Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 8634..9032 -
1692277553.1026134-CDS-M-pyrifera_M_contig12342:8633..90321692277553.1026134-CDS-M-pyrifera_M_contig12342:8633..9032Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12342 8634..9032 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815752.8840563-UTR-M-pyrifera_M_contig12342:9032..90471622815752.8840563-UTR-M-pyrifera_M_contig12342:9032..9047Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12342 9033..9047 -
1692277553.1115704-UTR-M-pyrifera_M_contig12342:9032..90471692277553.1115704-UTR-M-pyrifera_M_contig12342:9032..9047Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig12342 9033..9047 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12342.4796.1

>prot_M-pyrifera_M_contig12342.4796.1 ID=prot_M-pyrifera_M_contig12342.4796.1|Name=mRNA_M-pyrifera_M_contig12342.4796.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=365bp
MPLQISDHLTWAGASAAETHGIQHACHATWPLAMLEECGILPARSLSSLV
RITVRRIRSCRLAPAFLKPPGPTRRLLDSVRRQCLGAGGGGLVLVTSSFG
IEPPRTLPPFVKVVGRGHRPETADALAEHPELETFLDAHGVVVYVTFGSR
IPPPPALVRTVGEGLVAGGWAVVWSLKRAEASHLPRAALASGRFFVRPWL
PQGAALAHPNIRAAVTHCGMGGLFECAVNAVPLVPLPFSLSADQPVNARA
AEAAGFAARPHPSSSGVAFFKFWKKDTGPKYTAGAIRDAVLRAVQDPDLS
EGARRAQRAVLAAGYGRTAVTAVESACLYGVDHFVEREGGKSKPGSGPTL
WAVAGGVMAGVVVSG
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mRNA from alignment at M-pyrifera_M_contig12342:5182..9047-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12342.4796.1 ID=mRNA_M-pyrifera_M_contig12342.4796.1|Name=mRNA_M-pyrifera_M_contig12342.4796.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3866bp|location=Sequence derived from alignment at M-pyrifera_M_contig12342:5182..9047- (Macrocystis pyrifera P11B4 male)
ACGTGTGTACGAAATATGCCTCTACAGATCAGCGACCACCTCACGTGGGC
GGGGGCATCCGCGGCGGAGACGCATGGCATCCAACACGCCTGTCACGCCA
CCTGGCCGCTGGCCATGCTCGAGGAGTGCGGCATCCTGCCGGCGCGCTCC
CTCTCCTCCCTCGTGAGGATCACCGTGCGCCGCATTCGGTCATGCCGGCT
AGCCCCAGCGTTCTTGAAGCCGCCGGGACCGACTCGCCGCTTGCTCGACA
GCGTTCGCCGGCAATGCCTTGGAGCCGGGGGGGGCGGTCTGGTGTTGGTG
ACGTCGAGCTTTGGGATAGAGCCGCCGAGAACCTTGCCGCCGTTCGTGAA
GGTTGTCGGTCGCGGACACCGGCCGGAGACCGCGGATGCCCTGGCGGAGC
ATCCGGAGCTTGAGGTGGGTGACGGTGGGGGTAGAAAAATACCCATCTCC
CCCCCCCCCGGCCTCCCCTTGATTGTGTATTTTTTGCGCGGTTTGGGCCG
CGTTTTCCCCGCTTGCTCTGCTGCTGTGGAAGTTTGTTTTTGTTCGTGGT
CTGCCGCATTTTGTTTTTTCGTGCCGCGTCTGTGGCCGGCCGAAGGGCGA
ATCATGTGTAGTACACGGAGTTGCATCGCAGGCGTTTCTATTATATCGCT
GGGCGCTCGATTGGGAGCTAGGGAGCACGACACTGCCGGGAGGCGTTTGT
GTGATGGTGTTGGGGCGAGTGTAGTCATTATCATGCGTGGCGGTAGTGGT
AAAACGACCATAGACCCTCGCATCTCTAGAAGGCCGGGACGGAGCACGTC
GGTTTTTCACCCACCATGTAGACTGCATGCACCGAGCGCGAAGCGCCGTT
AGGTGTTCGGCGAGTCGCACGAAGGGTGAGCTGTACGTATCCTGCCAGGT
AGGATTGCTGTGAGACGAGCTTCGGCACCTTGTGCGTACTTCCTTGTATA
GAGGACAGCGTCGAATGCGTCGAATGGATTCAAAAACAATTCGTGTGTGG
TCGCTTCCAGAGACAGCAAGGGGTGTGCATTTTACCCGCTATGCAACCGT
TTTGTGGGTGAATTACCATATACCTCGTACACACTACGTGATACGACCAT
CCCCCTTGTGCGGAGTGTAGATTCTCCACCCGGCAGAAATAATCTAACTC
GATCGCCAGCGGTCGCCGACTGCCAAAAACAAACAAAACGGTACGCTGGT
TGTATAGCTCACGTTGTGAGCACCATGTTTTACAGTATCGTTGCCAACCG
ACGCCAACCCAACCTATACATTATACGTGTATATACGGGGGGGTATGTGG
TGATGGAGGTCCTGTAGTATTGTATGTAGGTGGGGGCTGGACTGGAAGCT
CACGTGGGGGTTAACGGCGCTGTGCATACTGGCTTCTGTTGTGCAAGGTC
AGCGGTTTACTTTGGTCCAGTTGAGCGGCATTTGACGGACGTGCGTCCGT
TATCGACCCCAATTCGAGACGCCGCCACGGATAATCCTTCTCGTGCGTCC
CCCGGGCGCTCTTAACCTCTGTTTCACCCCTTTCCGCGGCCCCCCTCCCT
CTTTCTCTGTCTTATTCCCTTCCTCCCTCCCTCCCCTCCTCCGCCCCCTC
TCCCCTCGCGCGTCTACCGTCGTAACGCCCGCTCGTACTACCCGGCACCA
GACGTTCCTTGACGCCCATGGCGTGGTGGTGTATGTGACGTTTGGCAGCC
GTATACCGCCTCCCCCAGCCCTCGTGCGAACCGTTGGGGAAGGGCTGGTG
GCCGGGGGGTGGGCGGTGGTATGGTCCCTGAAAAGAGCCGAGGCGTCCCA
CCTTCCTCGCGGTGAGAGGTGGCGTGCCCCTCTTACGTGTTGCATCTCTT
TCTGCTCGCGGTGCCTACCCGTCGCCCCTTCCAACGCATAGCTAATGAAC
GCAACAAAACTAGGGCTTCTTGCTTGAGGCGTTGTTGACCGTTTCTTAAC
GATTTTGTTCCCATTATTTTATGTGTACTTATTGTGCGAGGCATTCGTTG
TTTCCTGATTACTATTACTACGTACCTTCCCCTCGTACGCGAGTGTGTGG
GTGGGTGCTTTTGTTTCTCGCTGTCGGTCCCTCCTAGTTGAAGTTGGCAT
GCTTGTCCTCGCGTTTGCGCCTGGTCGGGGTTTTCTACCGAGTTGGAATG
GAATTCTGTTTCGCTCGCTATGCTGGGCTGACGGAACCCATACCCCGCAC
GCCCCCCTGTGCTGCTTGTTTTCCCCACTGCCCGTGGCCGCTGCAACCCG
ACCCGACCCTGTGTGTTGCCCTGCGACAACCGCGCAACATACGCGCGTTA
TTATGCCGCAGCCGCTCTTGCATCCGGAAGGTTCTTCGTCAGGCCGTGGC
TGCCGCAGGGTGCTGCGCTGGCCCATCCGAACATCAGGGCAGCTGTAAGT
ACTTGCGGCTTCCCGCTGCTGCAGGGGCCACGACTTTCGTGTTTTTGGCT
TGCAGCGCGCTCGATGATGCTTTTATCTGTTGATAGAGGTTCAACGTTCG
ATGGTGTCGATCGCTCGCAGAATCAGGAGAATCAGTTGAAGACATCACTC
ATGCCTGGACTGCCTTCTTGATTTCCGTATCCGCTCTCATCACGCATCGC
ACCCACACACAGACGACGGGAGAGACAGCTGAGCACCCTCCCTCCATCTC
TCCCTCCGTCCCCCACCCCTTCCCTCCCCCCGAACCCCCTTGCCCGTCCG
CTTTCCGTCCTTCCACCTTTTCTAGGTAACTCACTGTGGCATGGGCGGGT
TGTTTGAGTGCGCGGTCAACGCCGTCCCTCTCGTCCCGCTCCCCTTCTCC
CTATCCGCCGACCAGCCTGTCAACGCCCGCGCGGCGGAGGCCGCCGGTTT
CGCTGCCCGCCCCCACCCCTCCTCCTCCGGGGTCGCATTTTTCAAGTTTT
GGAAAAAGGACACCGGGCCGAAATACACGGCTGGAGCCATTCGAGACGCC
GTGCTTAGGGCGGTGCAGGACCCGGATCTGTCGGAGGGGGCGCGGAGGGC
GCAGCGAGCTGTCCTGGCGGCGGGGTATGGGCGAACGGCGGTGACTGCCG
TGGAGTCGGCGTGAGTATATATAACGAAGCCGTGCTTTGGTTTGAGCTTG
GTTTGGTTTGGCGTGGTTTTGTTTATTCTGGGGCTGGGTTGGTTTCTAGT
TGGGTCGGGTTGGATTTGGTTGAGTAGGGTTGATCCGGGGTGTGTTTATG
AGTCGTTCAGTTAGGTTTGGTTTGGGTTGTTCCGGATCGAGCCGATGTGA
GTTGAACCGTGGCTGGTTCGGTTCGGTTGGGTTCGGTTATGTTCGGTTAG
GCTTGGTGTGCGTAGATTTGGTTCGTTTCATTTTGGTTCGGTGTGTTTTT
GTTCGTTGTAGTTTGGTTTGGTTTGGTTCGATTTGGTTTGGTCCAATTTG
GTTTGGTGTGTTTGGTTCGGTTTGGGTGGTTGGTCTAGTCCGGTCCAGTG
TAGTCCAGTCTGGCCCGCCTGTGACGAGTTTTTGTGGATCGGCCGACCGC
GTGACAATAGTTCAGAAGCATAGGGTTCGGGGCGTCCTTGAAACCTAACG
GTACGGCGTTGCGGCGCGGGCTTGGTCTGTTCCCCAATCCACCAGCCGTC
GTCCGCACACAGCATCGTGGCTGACACCGCGAGCCCATGCCCTTTCCGAT
CCCCCCCCCCCCCCTCCTCTCCCTTACTCTTCTACCCCCCTGTCGCAACG
CACGCGCTTCGCCCACATGTCGTCTTTGCCCTGACGCCCACGACACAGCT
GTCTGTACGGCGTAGATCACTTCGTGGAGCGGGAAGGAGGAAAGTCGAAG
CCCGGTTCGGGGCCAACCCTCTGGGCCGTGGCTGGGGGTGTGATGGCTGG
AGTGGTCGTGTCGGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig12342:5182..9047-

>mRNA_M-pyrifera_M_contig12342.4796.1 ID=mRNA_M-pyrifera_M_contig12342.4796.1|Name=mRNA_M-pyrifera_M_contig12342.4796.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2190bp|location=Sequence derived from alignment at M-pyrifera_M_contig12342:5182..9047- (Macrocystis pyrifera P11B4 male)
ATGCCTCTACAGATCAGCGACCACCTCACGTGGGCGGGGGCATCCGCGGC
GGAGACGCATGGCATCCAACACGCCTGTCACGCCACCTGGCCGCTGGCCA
TGCTCGAGGAGTGCGGCATCCTGCCGGCGCGCTCCCTCTCCTCCCTCGTG
AGGATCACCGTGCGCCGCATTCGGTCATGCCGGCTAGCCCCAGCGTTCTT
GAAGCCGCCGGGACCGACTCGCCGCTTGCTCGACAGCGTTCGCCGGCAAT
GCCTTGGAGCCGGGGGGGGCGGTCTGGTGTTGGTGACGTCGAGCTTTGGG
ATAGAGCCGCCGAGAACCTTGCCGCCGTTCGTGAAGGTTGTCGGTCGCGG
ACACCGGCCGGAGACCGCGGATGCCCTGGCGGAGCATCCGGAGCTTGAGA
TGCCTCTACAGATCAGCGACCACCTCACGTGGGCGGGGGCATCCGCGGCG
GAGACGCATGGCATCCAACACGCCTGTCACGCCACCTGGCCGCTGGCCAT
GCTCGAGGAGTGCGGCATCCTGCCGGCGCGCTCCCTCTCCTCCCTCGTGA
GGATCACCGTGCGCCGCATTCGGTCATGCCGGCTAGCCCCAGCGTTCTTG
AAGCCGCCGGGACCGACTCGCCGCTTGCTCGACAGCGTTCGCCGGCAATG
CCTTGGAGCCGGGGGGGGCGGTCTGGTGTTGGTGACGTCGAGCTTTGGGA
TAGAGCCGCCGAGAACCTTGCCGCCGTTCGTGAAGGTTGTCGGTCGCGGA
CACCGGCCGGAGACCGCGGATGCCCTGGCGGAGCATCCGGAGCTTGAGAC
GTTCCTTGACGCCCATGGCGTGGTGGTGTATGTGACGTTTGGCAGCCGTA
TACCGCCTCCCCCAGCCCTCGTGCGAACCGTTGGGGAAGGGCTGGTGGCC
GGGGGGTGGGCGGTGGTATGGTCCCTGAAAAGAGCCGAGGCGTCCCACCT
TCCTCGCGACGTTCCTTGACGCCCATGGCGTGGTGGTGTATGTGACGTTT
GGCAGCCGTATACCGCCTCCCCCAGCCCTCGTGCGAACCGTTGGGGAAGG
GCTGGTGGCCGGGGGGTGGGCGGTGGTATGGTCCCTGAAAAGAGCCGAGG
CGTCCCACCTTCCTCGCGCCGCTCTTGCATCCGGAAGGTTCTTCGTCAGG
CCGTGGCTGCCGCAGGGTGCTGCGCTGGCCCATCCGAACATCAGGGCAGC
TCCGCTCTTGCATCCGGAAGGTTCTTCGTCAGGCCGTGGCTGCCGCAGGG
TGCTGCGCTGGCCCATCCGAACATCAGGGCAGCTGTAACTCACTGTGGCA
TGGGCGGGTTGTTTGAGTGCGCGGTCAACGCCGTCCCTCTCGTCCCGCTC
CCCTTCTCCCTATCCGCCGACCAGCCTGTCAACGCCCGCGCGGCGGAGGC
CGCCGGTTTCGCTGCCCGCCCCCACCCCTCCTCCTCCGGGGTCGCATTTT
TCAAGTTTTGGAAAAAGGACACCGGGCCGAAATACACGGCTGGAGCCATT
CGAGACGCCGTGCTTAGGGCGGTGCAGGACCCGGATCTGTCGGAGGGGGC
GCGGAGGGCGCAGCGAGCTGTCCTGGCGGCGGGGTATGGGCGAACGGCGG
TGACTGCCGTGGAGTCGGCGTAACTCACTGTGGCATGGGCGGGTTGTTTG
AGTGCGCGGTCAACGCCGTCCCTCTCGTCCCGCTCCCCTTCTCCCTATCC
GCCGACCAGCCTGTCAACGCCCGCGCGGCGGAGGCCGCCGGTTTCGCTGC
CCGCCCCCACCCCTCCTCCTCCGGGGTCGCATTTTTCAAGTTTTGGAAAA
AGGACACCGGGCCGAAATACACGGCTGGAGCCATTCGAGACGCCGTGCTT
AGGGCGGTGCAGGACCCGGATCTGTCGGAGGGGGCGCGGAGGGCGCAGCG
AGCTGTCCTGGCGGCGGGGTATGGGCGAACGGCGGTGACTGCCGTGGAGT
CGGCCTGTCTGTACGGCGTAGATCACTTCGTGGAGCGGGAAGGAGGAAAG
TCGAAGCCCGGTTCGGGGCCAACCCTCTGGGCCGTGGCTGGGGGTGTGAT
GGCTGGAGTGGTCGTGTCGGGCCTGTCTGTACGGCGTAGATCACTTCGTG
GAGCGGGAAGGAGGAAAGTCGAAGCCCGGTTCGGGGCCAACCCTCTGGGC
CGTGGCTGGGGGTGTGATGGCTGGAGTGGTCGTGTCGGGC
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