mRNA_M-pyrifera_M_contig12337.4784.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig12337.4784.1
Unique NamemRNA_M-pyrifera_M_contig12337.4784.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: D7FX38_ECTSI (Similar to Probable phospholipid-transporting ATPase ID (ATPase class I type 8B member 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX38_ECTSI)

HSP 1 Score: 569 bits (1467), Expect = 8.150e-195
Identity = 300/416 (72.12%), Postives = 332/416 (79.81%), Query Frame = 1
Query:  181 TAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQ-------KKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAA-TAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPANVR 1404
            T +YT LNFV KNLWEQFHRPAN+YFLGISILQCIK ISITGGTPTTLAPLTAVL AT+TKDGIED+ RH+ADAQEN RTVTR+ VPG+RR +            ++R  +GG   S   + P PP  TE VPWMDV+VGD++EI NRENIPAD+VMLSCSDPKGTCFV+TSNLDGETNLKPRV+SPDLRA   AA G     ++ GG    AG     VLALAA GA VECDLPNQKLEHFDGALV   G R+PL G N+LLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEP  K SSLK YVDRETL VLC+QI  CLV  VFAGI AAGSDV+NMYFI G   +  QSP L AFLKFWSFIIIFTNFVPISLL+TLDMVK+FQS+ I+WDR+MYHEAREF+G +R MPA VR
Sbjct:   15 TQEYTALNFVFKNLWEQFHRPANVYFLGISILQCIKPISITGGTPTTLAPLTAVLIATSTKDGIEDFTRHQADAQENSRTVTRLVVPGQRRNSVAGGKGXXXXXXKERKNSGG---SIRGSKPRPPAATEEVPWMDVQVGDVLEIRNRENIPADLVMLSCSDPKGTCFVLTSNLDGETNLKPRVVSPDLRAVIAAADGAAAVAESAGG---LAGGEQGSVLALAAKGALVECDLPNQKLEHFDGALVLQGGERIPLQGKNILLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPAPKSSSLKPYVDRETLHVLCVQIFLCLVAAVFAGIRAAGSDVENMYFILGQDEEP-QSPALVAFLKFWSFIIIFTNFVPISLLITLDMVKVFQSKFIAWDRQMYHEAREFDGTKRPMPAQVR 423          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A6H5J7R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R3_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 3.060e-185
Identity = 296/427 (69.32%), Postives = 329/427 (77.05%), Query Frame = 1
Query:  163 MTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKP---------QQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRG----VLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPANVR 1404
            M NEVVT+KYT LNFV KNLWEQFHRPAN+YFLGISILQCIK ISITGG P        +  AT+TKDGIED+ RH+ADAQEN RTVTR+ VPG+RR +              ++R  +GG   S   + P PP  TE VPWM+V+VGD++EI NRENIPAD+VMLSCSDPKGTCFVMTSNLDGETNLKPRV+SPDLRA  AA  +          A+ AG   RG    VLALAA GA VECDLPNQKLEHFDGALV   G R+PLHG N+LLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEP  K SSLK YVDRETL VLC+QI  CLV  VFAGI AAGSDV+NMYFI G   +  QSP L AFLKFWSFIIIFTNFVPISLL+TLDMVK+FQS+ I+WDR+MYHEAREF+G +R MPA VR
Sbjct:    1 MANEVVTSKYTALNFVFKNLWEQFHRPANVYFLGISILQCIKPISITGGHPKLTRTNVTMTQATSTKDGIEDFTRHQADAQENSRTVTRLVVPGQRRSSXXXXXXXXXXXXCGKERKNSGG---SIRGSKPRPPAATEEVPWMNVQVGDVLEIRNRENIPADLVMLSCSDPKGTCFVMTSNLDGETNLKPRVVSPDLRAVIAAADD------AAAVAESAGGLARGKQGSVLALAAKGALVECDLPNQKLEHFDGALVLQGGERIPLHGKNILLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPAPKSSSLKRYVDRETLHVLCVQIFLCLVAAVFAGIRAAGSDVENMYFILGQDEEP-QSPALVAFLKFWSFIIIFTNFVPISLLITLDMVKVFQSKFIAWDRQMYHEAREFDGTKRPMPAQVR 417          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A7S2WGS7_9STRA (Phospholipid-transporting ATPase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGS7_9STRA)

HSP 1 Score: 303 bits (777), Expect = 9.470e-89
Identity = 190/466 (40.77%), Postives = 245/466 (52.58%), Query Frame = 1
Query:   40 GGTLEKPPTFRTVDIGDDGKNERGLFKEPFRPGPPQTGPGHMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLT-----------AFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPANVR 1404
            GG       FR + IGD+ + E  L +EP + G      G   N VVT+ YT  NF+  NLW+QF R  N+YFL ISILQ I  ISIT G PT L  L  +L  TA KDGIED+HRH+AD +EN R                                   + L         W DV+VGD+IEI NRE IPAD+V+L  SD  G CFVMT+NLDGETNLK R +S ++  +T                        GV      G  +  +LPN  L  F+G      G   PL   NVLLRG QL+N+ W RG+VV+TGRE+KIQMNAA+PP K SS+    + ETL +  +Q   CL+ G+ AG+ A  S VK M +IWG   D      LT             +KFW+FI+IFTNF+PI+ +V+LD+VK+ Q+ ++ +D   YHE  +  G     P +VR
Sbjct:   19 GGDGHGGLAFRQIFIGDEERTESELAREPSKGG------GTRDNLVVTSLYTWWNFIPLNLWKQFQRRQNVYFLFISILQTIDKISITLGVPTVLPILLLLLLITAVKDGIEDFHRHQADREENGRCAH-------------------------------VINLKSDIAADTSWRDVKVGDVIEIRNRELIPADVVLLQSSDENGLCFVMTANLDGETNLKLRKVSANMHGST-----------------------HGV------GCSLRSELPNNHLSTFEGTFRDEKGDNHPLSNENVLLRGTQLKNSLWVRGLVVFTGRESKIQMNAAKPPHKMSSMTVLANTETLIIFLVQCGFCLLCGILAGLFADRSAVKRMTYIWGYRGDDISKEPLTPQDIDNSSVEIGIIKFWTFILIFTNFIPIAHVVSLDLVKIVQAVMMKYDLRCYHEVTDDFGETTRFPLDVR 418          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A4D9DI51_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI51_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.640e-82
Identity = 172/393 (43.77%), Postives = 223/393 (56.74%), Query Frame = 1
Query:  235 HRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGV---RLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPANVR 1404
            HR AN+YFL ISILQ IKA+SIT G PTT  PL+ VLF TA KD IED++RH+ADA EN RT   +              Q+R      G       P          W D++VGD++ I NR+ IPADI++LS ++P G  FVMT+NLDGETNLK + +  D R                             L+    GA V CDLPN  LEHF+G   F       ++PL   N+LLRGC LRNT W  GVVVYTGRE+KIQMNAAE   K  S++ +VDRET+ VL LQ+ CCLV  +  G+ A     +  Y +W +G +    P L+  ++F+++ +IF+N +PISLLVTLDMVK FQ   ++WD  MYH+  +  G    +P   R
Sbjct:    2 HRAANVYFLFISILQTIKAVSITSGVPTTALPLSFVLFVTAVKDAIEDFNRHRADAVENNRTSYLLT-------------QER------GWDLHHAHPRK--------WQDIKVGDVVVIKNRDPIPADIILLSSAEPSGLAFVMTANLDGETNLKAKEVHKDFRNLP--------------------------LSAKLDGAEVVCDLPNNSLEHFEGLYSFQKDTGEQKIPLTARNILLRGCVLRNTAWAVGVVVYTGRESKIQMNAAETRQKVGSVRRFVDRETVMVLGLQVTCCLVAAILGGL-AVKRGAQTPY-LW-EGRE-LPDPALSGLIQFFTYTVIFSNMLPISLLVTLDMVKFFQGVFMTWDLRMYHQLEDAEGQPVEIPCLAR 337          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A2R5GRE4_9STRA (Phospholipid-transporting ATPase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GRE4_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.180e-70
Identity = 151/404 (37.38%), Postives = 210/404 (51.98%), Query Frame = 1
Query:  160 HMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVP--WMDVRVGDLIEIHNRENIPADIVMLSCSDP-KGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPD---GVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYH 1353
            HM N + T+ YT+ NF+  N ++Q HR AN+YFL I  LQ  + +SIT G P+  +PL  VL  TA KD +ED+ RHK D  EN R V  +    K                              GE       W  ++VG ++ I NR+ IPADI +L C+D      +VMT+ LDGETNLK R + P +  +                          + +L AS   V C+LPN+ LE FDGAL + +   GV++PL   N+LLRG QLRN++W  GVVVY G ETK+Q+NAA    K SS  A   +    +  +Q   CL   +  G+ +    +++ +++W       +       L+F++++IIFTNF+PISLLVT+DMVK  Q   ISWD  MYH
Sbjct:   36 HMDNTIRTSYYTVWNFIFLNAYKQLHRAANVYFLLIMFLQMWQEVSITRGEPSMASPLAFVLLVTALKDALEDWSRHKYDRIENSRLVQVLERTDK----------------------------DTGEMHFASRTWDSLKVGSVVRIKNRDMIPADIALLQCADQVNNVVYVMTAGLDGETNLKQRQVPPQIPPS--------------------------LHSLGAS-CKVTCNLPNKILESFDGALSYEEDGIGVQIPLTSSNILLRGSQLRNSDWAVGVVVYAGAETKLQLNAATSTFKTSSAMAMAQQLMTYIFAMQCFLCLGAALMVGVHSEA--IEDYFYLWVSPKKFAEE----MTLRFFNYVIIFTNFIPISLLVTIDMVKFGQGFFISWDLGMYH 378          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A0G4GZW6_9ALVE (Phospholipid-transporting ATPase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GZW6_9ALVE)

HSP 1 Score: 248 bits (632), Expect = 1.300e-68
Identity = 167/450 (37.11%), Postives = 239/450 (53.11%), Query Frame = 1
Query:   52 EKPPTFRTVDIGDDGKNERGLFKEPFRPGPPQTGPGHMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAAS-GAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPAN 1398
            E  PT R VDI    ++ERG  ++            H++N V+T+KYT + F+  NL  QF +  NIYFL + +LQ +  IS T G PT   PLT V+     KDG+EDY RH +D +EN  T TR+ +P    R+++ +   R G         +   LPP +     W +V +GD+I + NRE  P+D+++L+ SD  G  ++ T+NLDGETNLK +                   QA    +D  G   +    +A      +EC  PN+ L  F+G L      R+ L    +LLRGC+LRNTEW  GV VYTG ++KIQMN+  P  K S +    +  TL +  +Q+  CL  G+ AG   A  + +   ++  + S+    P   AFL+F +FI+IFTNF+PISLLVTL +VK  Q R+I  D++MYHE  +     RS   N
Sbjct:   17 EDGPT-RVVDI----RHERGPHEK------------HISNRVITSKYTPITFIPYNLLNQFRKGPNIYFLVLGVLQMVPQISTTNGIPTLALPLTLVVVVAMIKDGVEDYRRHVSDREENA-TKTRV-IP----RDWKPERPPREG------EDLSLDALPPKQ-----WHEVELGDVIIVGNREMFPSDMILLASSDQYGIAYIETANLDGETNLKLK-------------------QAHSSTSDYFGHSAKEAWDVAGKVEGQIECQPPNKFLHQFEGTLQIQGHERVSLSVTQLLLRGCKLRNTEWVMGVAVYTGHQSKIQMNSTRPRPKESRVGRETNLLTLIIFGMQMALCLSAGIAAGFLEANPENRARAYLQLEDSN----PAFNAFLRFLTFILIFTNFIPISLLVTLGLVKGAQGRIIGLDKDMYHERTKSYAVVRSSDLN 409          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A146L550_LYGHE (Phospholipid-transporting ATPase (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A146L550_LYGHE)

HSP 1 Score: 224 bits (571), Expect = 2.870e-64
Identity = 141/400 (35.25%), Postives = 207/400 (51.75%), Query Frame = 1
Query:  160 HMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEA 1359
            ++TN + TAKYT L+F+   L+EQF R +N +FL I++LQ I  +S TG   TTL PL  +L  +A K+ +EDY RH AD + N R V                                   L  G  + + W +V VGDL+++ N +  PAD+++LS S+P+G C++ T NLDGETNLK R   P+                                AL    A +EC+ PN+ +  F+GAL  P    LPL    VLLRG  LRNT W  GVV+YTG ETK+ MN+ + P+K S++    + + L +  L +  CLV  +++ +      +   +++  D +  +   F   FL   +FII+F N +PISL VTL++V+  Q+  I+ D +MYHEA
Sbjct:   68 YLTNHITTAKYTKLSFIPSFLFEQFRRYSNCFFLFIALLQQIPDVSPTGRY-TTLVPLIFILLVSAIKEIVEDYKRHVADRETNHREVE---------------------------------VLKEGNWQWITWENVAVGDLLKVQNNQFFPADLIVLSTSEPQGMCYIETMNLDGETNLKIRQSLPET------------------------SHLLDTRALTDYRASIECEHPNKLIYEFNGALKEPGKQPLPLGPERVLLRGAMLRNTSWIFGVVIYTGHETKLLMNSTKAPLKRSTIDKATNTQVLMLFFLLVFLCLVSSLYSELWTR-EHLSAYWYLGMDQNGKFSRNFGFNFL---TFIILFNNLIPISLQVTLEVVRFVQATFINQDLDMYHEA 405          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: S4RCC6_PETMA (Phospholipid-transporting ATPase n=7 Tax=Petromyzon marinus TaxID=7757 RepID=S4RCC6_PETMA)

HSP 1 Score: 218 bits (556), Expect = 1.660e-61
Identity = 156/408 (38.24%), Postives = 213/408 (52.21%), Query Frame = 1
Query:  181 TAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAA-GSDVKNMYFIWGDGSDGYQSPFLTAF-LKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHEAREFNGARRSMPAN 1398
            TAKY  L F+ + L+EQF R AN++FL I++LQ I  +S TG   TTL PL  +L   A K+ IEDY RH+AD + N +  T++                                L  G+   V W  V VGD++ I N +N+PAD+VMLS S+P+  C++ T+NLDGETNLK R                 QG  L      AG +T   L L+  G  +EC+ PN+ L  F G +       +PL    +LLRG QLRNT+W  GVVVYTG +TK+  N+   P+K S+    VDR T     LQIL  +V  +   + +A GS +       GD   G++    + F   F +FII++ N +PISLLVTL++VK  Q+  I+WD EMYHE    N   R+   N
Sbjct:    2 TAKYNALTFLPRFLYEQFSRAANLFFLFIALLQQIPEVSPTGRY-TTLMPLIFILVVAALKEIIEDYKRHRADREVNKKKTTQV--------------------------------LQNGDWHTVSWEKVGVGDVLRITNGQNLPADLVMLSSSEPQAMCYIETANLDGETNLKIR-----------------QGLPL-----TAGLQTSDSL-LSIDGR-IECEAPNRHLYDFTGNIQLQGHGTVPLGPDQILLRGAQLRNTQWVFGVVVYTGHDTKLMQNSTRAPLKRSN----VDRVTN----LQILLLVVTLLLMALASAIGSSIWTSAHWKGDWYLGFRDNAPSNFGFNFLTFIILYNNLIPISLLVTLEVVKFIQAFFINWDSEMYHEESNTNAMARTSNLN 344          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A1R2BP24_9CILI (Phospholipid-transporting ATPase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BP24_9CILI)

HSP 1 Score: 226 bits (577), Expect = 1.880e-61
Identity = 142/406 (34.98%), Postives = 211/406 (51.97%), Query Frame = 1
Query:  142 PQTGPGH-MTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMYHE 1356
            P+  P H + N + T KY  L F+ KNLW QF + ANIYFL I++LQ I  I+++ G P  L PL  VL  +A KD +ED +R K+D +EN R + +          +Q                           E + WMD+ VGD++++   E  PAD+++LS S+P G C++ T NLDGETNLK ++    L       G                       AL    A + C++PN  +  F G +   D   + L     LLRG  LRNTEW  G+VVY+G ETKI +N+++   K+S L+A ++ E + +  LQ+  CL   +F  I  + +      ++  +  +  +S  +   L F+++++IFTNFVPISL+VTL+MVK  Q   ISWD +MY+E
Sbjct:   18 PKLEPSHFIPNSITTCKYNFLTFLPKNLWFQFQKLANIYFLIIAVLQVIPQITVSDGVPNILLPLGFVLTVSAVKDLLEDLNRRKSDNEENNRQILK----------WQNS-----------------------NWESLKWMDICVGDVVKVRKNEYFPADLILLSSSEPNGLCYIETKNLDGETNLKHKLCCRVLHDMLHDEG-----------------------ALDRFFAEIICEIPNPMIYEFKGKITAMD-TEVMLGTEQFLLRGSSLRNTEWIIGIVVYSGHETKIMLNSSKSQNKFSFLEARMNDEIINIFILQVTICLFCALFYVIWFSHTSSDTEQYL--ELDEHTESRLVVFILIFFTWMLIFTNFVPISLIVTLEMVKFVQGIFISWDIKMYYE 364          
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Match: A0A397AJS6_9STRA (PhoLip_ATPase_N domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AJS6_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.240e-61
Identity = 148/407 (36.36%), Postives = 212/407 (52.09%), Query Frame = 1
Query:  139 PPQTGPGHMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISITGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKRRRNYQKKPQQRAGAGGAGASSGATLPLPPGETE----MVPWMDVRVGDLIEIHNRENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPGEQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVFPDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKYSSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSDGYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREM 1347
            PP T      N + T+ YT  NF+ KNL++QF R +N+YFL I++LQ I  ++++GG PTT+ PL  VLF  A KD IED HRH AD  +N                                 S  TL +  G+ +       W D+ VG ++++H  E IPAD+++L+ S P G CF MT+NLDGETNLK R +   L    A+P        +  +AD         +     GA VE + P+++L+ F   L   D V++ +   N+LLRG  LR+T+W  GV VYTG +TKIQ N+ E P K SSL    +  T +++ LQ++  +V  V     A G D+          S       L AF  F +++++F+NFVPISL VT+D+ +  QS L+  D EM
Sbjct:   47 PPDTS--FAPNRISTSIYTPYNFLFKNLFKQFARLSNMYFLFITVLQVIPQVTLSGGYPTTIVPLVFVLFVNAIKDLIEDIHRHNADTVQN---------------------------------SSKTLQMQDGDAKPAFVATTWADLHVGSIVKVHQNEIIPADMIILASSSPIGQCFTMTANLDGETNLKIRWVPSQL----ASPDNP-----MTADAD---------IWAKMHGAHVEAEEPSRRLDRFKATLTTCDNVKVSIGISNLLLRGVLLRDTDWAVGVTVYTGDDTKIQQNSGETPFKSSSLSKMTNIMTYQIIVLQVVLQIVAVVVE---ALGPDLPY--------SPRNSQSMLNAFWLFLTYMLLFSNFVPISLQVTVDITRFVQSILLCLDTEM 389          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12337.4784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX38_ECTSI8.150e-19572.12Similar to Probable phospholipid-transporting ATPa... [more]
A0A6H5J7R3_9PHAE3.060e-18569.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WGS7_9STRA9.470e-8940.77Phospholipid-transporting ATPase n=1 Tax=Rhizochro... [more]
A0A4D9DI51_9STRA1.640e-8243.77Phospholipid-transporting ATPase n=2 Tax=Monodopsi... [more]
A0A2R5GRE4_9STRA3.180e-7037.38Phospholipid-transporting ATPase n=1 Tax=Hondaea f... [more]
A0A0G4GZW6_9ALVE1.300e-6837.11Phospholipid-transporting ATPase n=1 Tax=Chromera ... [more]
A0A146L550_LYGHE2.870e-6435.25Phospholipid-transporting ATPase (Fragment) n=3 Ta... [more]
S4RCC6_PETMA1.660e-6138.24Phospholipid-transporting ATPase n=7 Tax=Petromyzo... [more]
A0A1R2BP24_9CILI1.880e-6134.98Phospholipid-transporting ATPase n=1 Tax=Stentor c... [more]
A0A397AJS6_9STRA3.240e-6136.36PhoLip_ATPase_N domain-containing protein (Fragmen... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12337contigM-pyrifera_M_contig12337:1267..8540 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score575.9
Seed ortholog evalue1.8e-161
Seed eggNOG ortholog2880.D7FX38
KEGG koko:K01530,ko:K14802
KEGG TC3.A.3.8
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004012,GO:0005215,GO:0005319,GO:0005488,GO:0005548,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006869,GO:0006900,GO:0006950,GO:0006996,GO:0007275,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010286,GO:0010876,GO:0012505,GO:0015711,GO:0015748,GO:0015914,GO:0016020,GO:0016043,GO:0016049,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019216,GO:0019222,GO:0022414,GO:0022622,GO:0030154,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0033036,GO:0034204,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045332,GO:0046872,GO:0046914,GO:0048193,GO:0048194,GO:0048364,GO:0048367,GO:0048468,GO:0048588,GO:0048589,GO:0048731,GO:0048856,GO:0048868,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0060560,GO:0061024,GO:0065007,GO:0065008,GO:0071702,GO:0071840,GO:0071944,GO:0080090,GO:0097035,GO:0097708,GO:0098791,GO:0099402,GO:1905038
EggNOG free text desc.phospholipid-translocating ATPase activity
EggNOG OGsCOG0474@1,KOG0206@2759
EC3.6.3.1
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009
Exons7
Model size1404
Cds size1404
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815752.13477-CDS-M-pyrifera_M_contig12337:1266..13201622815752.13477-CDS-M-pyrifera_M_contig12337:1266..1320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 1267..1320 +
1692277552.6567152-CDS-M-pyrifera_M_contig12337:1266..13201692277552.6567152-CDS-M-pyrifera_M_contig12337:1266..1320Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 1267..1320 +
1622815752.1477044-CDS-M-pyrifera_M_contig12337:2500..26351622815752.1477044-CDS-M-pyrifera_M_contig12337:2500..2635Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 2501..2635 +
1692277552.6691449-CDS-M-pyrifera_M_contig12337:2500..26351692277552.6691449-CDS-M-pyrifera_M_contig12337:2500..2635Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 2501..2635 +
1622815752.158471-CDS-M-pyrifera_M_contig12337:4955..51141622815752.158471-CDS-M-pyrifera_M_contig12337:4955..5114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 4956..5114 +
1692277552.6787696-CDS-M-pyrifera_M_contig12337:4955..51141692277552.6787696-CDS-M-pyrifera_M_contig12337:4955..5114Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 4956..5114 +
1622815752.1749215-CDS-M-pyrifera_M_contig12337:6118..62251622815752.1749215-CDS-M-pyrifera_M_contig12337:6118..6225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 6119..6225 +
1692277552.6882555-CDS-M-pyrifera_M_contig12337:6118..62251692277552.6882555-CDS-M-pyrifera_M_contig12337:6118..6225Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 6119..6225 +
1622815752.1860926-CDS-M-pyrifera_M_contig12337:6327..67691622815752.1860926-CDS-M-pyrifera_M_contig12337:6327..6769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 6328..6769 +
1692277552.7005928-CDS-M-pyrifera_M_contig12337:6327..67691692277552.7005928-CDS-M-pyrifera_M_contig12337:6327..6769Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 6328..6769 +
1622815752.1977365-CDS-M-pyrifera_M_contig12337:7132..73391622815752.1977365-CDS-M-pyrifera_M_contig12337:7132..7339Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 7133..7339 +
1692277552.7148323-CDS-M-pyrifera_M_contig12337:7132..73391692277552.7148323-CDS-M-pyrifera_M_contig12337:7132..7339Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 7133..7339 +
1622815752.2118537-CDS-M-pyrifera_M_contig12337:8240..85401622815752.2118537-CDS-M-pyrifera_M_contig12337:8240..8540Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 8241..8540 +
1692277552.7313695-CDS-M-pyrifera_M_contig12337:8240..85401692277552.7313695-CDS-M-pyrifera_M_contig12337:8240..8540Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig12337 8241..8540 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12337.4784.1prot_M-pyrifera_M_contig12337.4784.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig12337 1267..8540 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig12337.4784.1

>prot_M-pyrifera_M_contig12337.4784.1 ID=prot_M-pyrifera_M_contig12337.4784.1|Name=mRNA_M-pyrifera_M_contig12337.4784.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=468bp
MKQALRRGSSLLTGGTLEKPPTFRTVDIGDDGKNERGLFKEPFRPGPPQT
GPGHMTNEVVTAKYTLLNFVAKNLWEQFHRPANIYFLGISILQCIKAISI
TGGTPTTLAPLTAVLFATATKDGIEDYHRHKADAQENFRTVTRIAVPGKR
RRNYQKKPQQRAGAGGAGASSGATLPLPPGETEMVPWMDVRVGDLIEIHN
RENIPADIVMLSCSDPKGTCFVMTSNLDGETNLKPRVISPDLRAATAAPG
EQGQGQALGGEADKAGERTRGVLALAASGAFVECDLPNQKLEHFDGALVF
PDGVRLPLHGHNVLLRGCQLRNTEWCRGVVVYTGRETKIQMNAAEPPVKY
SSLKAYVDRETLRVLCLQILCCLVGGVFAGICAAGSDVKNMYFIWGDGSD
GYQSPFLTAFLKFWSFIIIFTNFVPISLLVTLDMVKMFQSRLISWDREMY
HEAREFNGARRSMPANVR
back to top

mRNA from alignment at M-pyrifera_M_contig12337:1267..8540+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig12337.4784.1 ID=mRNA_M-pyrifera_M_contig12337.4784.1|Name=mRNA_M-pyrifera_M_contig12337.4784.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7274bp|location=Sequence derived from alignment at M-pyrifera_M_contig12337:1267..8540+ (Macrocystis pyrifera P11B4 male)
ATGAAGCAAGCTCTTCGCAGGGGCTCGAGCCTCTTGACGGGAGGGACCTT AGAGGTGCGACACGGTGCGCTCATGACGTCGAAAACGACTACCAATAATA ATAGGATACGAACTTTAGACATGTGTGATCATGATATCATACGTGATCGA CTATGCATTGCCTAACCTCCTTACTAGTACCGTGTATTGGCGATGGGTTA TCTCTGTCTCGCACAGTTTTGTGGTACGAATAAGGCTTGCAGTCTGCGGT ATTTTTCTCCCTGGCATGAACAATCATCAGCACGGACGGACGGGCACTGC TGATGAATGTGCTGGATATCGATGGGTACGTAGAAAGCCCTTTCAGAACT GCTGTGTTCCTGTTTTGAGGACAAACTACTTGAATTCCAAGTAGTTTGTC CCCAAAACGGGATTGCGGTCCTAAAAGGGCAAACGGTACACGTTTATTCA TGGTTTCGAGTAGGCTGACATCGGTTAGGGCACATCAGATACTCCTGTAC TTGTAGGTGCTACTGCAGCAGTATCCCCATTGGTCAATCAATGGGTAGTC TGCAATCTCACTTCTGATGTACGTACGTCTCACACTGTACCGCACGGGGG ATGCTGAAGCCGACCACATAAACGCAATAATAATACGCAGTCGCGTTTAG AGACACACCCATTCGCATTGTAGCAGTCCAGTCGACGTCATAGGTTGAGG ACGAGAAAGGGTCGATTCTCCGATTCTTAAGGAACAGTCTGCGTCGCCCC CCCTCCTAATTTCCGTCGAGAGGACTGCTGTCGCGCTACAGTACACGTAT CAAGTAGTAATGATTTTGGGGTCGAGAGGGACACTGAGAAGTGCGGTCTC ATCGACAGTCTAGCGCAAAGCGCAAGCGCGCAAGCAGCAAGAGCGGTACT GTACTATCGTGCTTCGAACGTGTGCCGTACAACTCCTCATATTGTGGTGG ACATCTATGATGCGGTAAATGTAGCATTTCCTAACCCAGCAGCTGTGGGC GATGCCGTAAAATCGACGTTGAATATTCATGTTCCTCACAATCCTCCTAT ATACAAGTCCAAAAAACAGTATCACTATTAATACGAGCACCTACGTTCGT AAGACGCTTACCAGGTACCAGGTACATAGCTATGATGCGGCGGTTGTGAG ACCAATCGGGTTCCTCCTACAAGTAAATATCACATAATTTACCTTGGGTG GCATTTTCCCCCCCCTGTTGGGGGCAACACGCAGAAACCACCGACTTTCC GGACCGTCGACATCGGGGACGATGGGAAGAACGAGAGAGGTCTCTTCAAG GAGCCATTCCGACCCGGCCCGCCGCAAACTGGTCCGGGGCACATGACGAA CGAGGTCGTTACCGCCAAGGTATATGGAGCCTTGCGTAGCCAACCGACGA GTGAGTGTTGCAAGGAATAGTGTATGCTTAGAGAGGACACCACGAAACAG TTGTAAGCCTTCCGTCGGGAAGCTTGTTGATCAGCCTGCTCCGCGCTACT TTCAGGGAAGAAATGAGCTGACAATGTGAGAACAACAGTCAGCTGATTCA TCATTCGTAGGAACTGCTTCTGTGATGCTAGAGACATGCGTTGCGTGGTG CCGCCGAGCTGGTTAGGAACCGGAGGCCTGGAACCCGCTCGTGAGAGGGC AGAGACGACGGCGAAGTTGGATGTGCACGTTGACCATCGATTTAGATGTG TGGCACTGCTCTGCGTACCAGCTGCAATATATTCTTCCTTGGACACCCAT GGGTTATGAACTTCCGGTGTGTTGTCAATAGTAGCAAGAACATGAAAGTA GTTGTAGTACCCATACTGTCGTGCTCATATCGATTTTTTATGTACGAGCA ACGGATGAGCACCCCTCAAATGCCCATACTTTTTTTGTCGAATCCGGAAT TTTCCTCGGAGAAACTCCGATATGTTCTCCTTCGGCGGTGTTTCCGTTAC GGAGAAAAGACTGCAAACAACATCATCAGCTGAAAACAACGAATGGGATG GGGGGGGTGAGGACCAAGTGAAACGCAGAGAACATGCCGACTTTGTGGCA GACGTTATGCGTGATTTGCTCGGCGAAAGCGTATGGTAACTATTACGGGG GTCCATAGTTAACAGTACCTATGATGTACATAAAAATATATATATTTGCC TATTTTGACTAACAAATTTTGGTCCCGTTAACTATGGACCCCCGTAATAG GGTGGGTTGCGGGCTGGGTGCGGTATCTGGGAGAAAAGGTAGTGTTGGGA GACAACCCACATAAAAAATCCGTGTTCATCGCCCCTCAAACACGACGTGG GCGTATGCTAGTTCCGGAAGAACCGCATGGAGACACGCCACGAAAGGCTG CGTGCCGACTACCAGGTAAACGCGTTCCGGGTGCCTCACATCGCAATCGC ACACCTAAGCACCTTATCACCGTCGGAGGGGTTTGGAAAATCGTACACGA CGCTCCCACGCTCCCACTGACGGGACAACCAACGGTAGCAGAACCTCCAA TCAACTGGGCTAGAAGTTTCGGGACAGTAAGGAAGAGAAGGAAGCCGAAG AATGGATACGAGTCGAACAAGCGACGACGTTGAGATAAGAGAAGGGTCAA CAAGTATGGGTGTGATATCATGCCGCAGTAGAAAGGCCTCATTGATCCCA AACTATATTCGAATTAGACTACGACGCGATGTTGCAACAACAGTAATCTG AAACAGAAAAGAGGGGACGCCTGCAGGGTGGATCCCTTTTCGGGAATGCC TCATAGTTGTACTAGGGGACGGTGGTTGAGTATTACTCCGTGAGCGATAT CGCAGCTCTACAATAGCACGACAAAGTAGAAAGAGGCTGGGGAAAAAAAG ACCATCCCGCTTGTCCATCGTTGGTAGCAAGGTGCACTGTCGATAACGAC ATCAGTTTTGATAGTTTTTATTTTACCGGCGACCTACTCTCTGCGACGAG GTGCCGCGTTGATTGCCAGAAAATTAACGCGGAAGTAGTAACTCTGGGTG AGAGTCTCCGGCTGGTCGCAACAGGAGGCCTCATTGATCCCAAACTATGT ACGAATCAACCTACGACGCGATGTTGCAACAGTACTTTTCTTCGCTTATC GTCGAGACCTGGTGATCAGTTTCGGTCTGTTCCTGTTTACAACTAGGTCC TTGCTTCCACAAGTAGTTAAAACGTACTTGACTTGTAACCACAACCACAA CGACCCAGGCCGCCTGAGAAATTTATCGGAATAAGTACGTATGGAGCGAG GAAGTGGCAGGGACAATCATCCCTTTTGTCGACGCTGGACCCATGCGCAA ATATTGTTGCTGTTTTATTTCTTTGTACATAACATACCTGGTACGTATCA CCTGGTACCAAAACTAAAAAAAAAAAAAAAAAAAGTTCCACTGACTACTC TGTACGACTAGCTTCGCGACTTGGCTTCATGATGTTGTGTTGTGTGCATC GCAACCACTAGTGCCAGGTATTGAATAGCTGTTTTAGTACAGAATACTTG AGCACTTGCTCGTTTACTCGAGTCTCGTTCAAAAACGTTTCCGTGCGTTG AGCGCCGCCGTCATGATCCCCCTAGCCCCACCCCCACCCCGATGTCCCGA AAGGGGTGCATAGCGAATGATAAAATGATTAAGGCACGCAACAAATTAGT ACCCCGTCCCCCCGCGCTCGTGTTTTGAACGTAAAACAGTACACCTTGCT CAACTTCGTCGCGAAGAACCTGTGGGAGCAGTTCCATCGTCCGGCCAACA TTTACTTCCTCGGCATATCCATTCTCCAGTGCATCAAGGCTATCAGCATC ACCGGCGGGACTCCGACGACGCTCGCCCCTCTCACCGCCGTGCTCTTCGT GAGTACTATTAAAAAAACGATCTGTGTCCGTAAACATACGTAAGAACCTT TTTTTGTGTCAACATGAATATGACACAAGTGTCCCTTTATAGTTTACGGA CAGAAAAATAGGGAGTTTTTTTTGTGTTAGTATGAATAGTATAGATAGTG TCCGCTGTGTTTCATGGACAGAGATATGAGGAACGCTTTTTTTGTGTGTT ATCATTTCGAAGTGTGAGTAACATAGTTGTCTCTAATGTTCACGGACAGG GAGGTACCACATGTATTCCAGACATGTAAGTATATAGTGCGACAGAAAGA AAAAACACTGCGGAAGCTGGCATCGCCGCCCGCTTTTGCGACCTGTGACT CGACACGCTCTCTTTTAGCAGCTCCGTAAAGTTAGCACTGCGCACGCGTT TTTTTGGTGTACAGACGACTTGGAATGAGTTTGGGAAAAATTGTTTTTGC AATCTGCGCCAGCCCGCGGTGGCGTGGAAACGGGTGACACACACAAACGT CGCCGTCAGTTTGAGCAACACGAATTTTTCTTCCGAAATGACCCCCAACC CTCTACATACTGGAGTTGAGCCAGCGAGTGGAGGGGGCGGGCGGGGGGGG GTACTCGATATCATGCATGGCCGTAGTCGTATGACCACAGGCCCTCGCAT TCCTAGATACATTGCCGGGATGGAGCACGTCTGGTTTTCACCGACCGGGC AGAAACTGTTCCTCCGACCCCACCACTCCCCACCACCAAAAATGTGAACG ATTCACGCCGAGACCTATTTTTTATCCACCCTTTCCGAACAGGCTCTCCC CTGCCTTCCCCTAGTGATGGACCCTTTCCCAACACCCCACAACTGAAACT AGGAAACCCAGTGAATCAGCCCCTGGCCCCCTCACGCTACTGTTAGCGAG GCAGAAATAGCAGTACGAAGAAGGTGGTTCCTCTCTGCGACGCAACCGCG TGACTGAAAGTAAACTTTTAAAAAATCGTGCGCGCGAACTCACGACGAGC AGGCCACCGCCACAAAAGACGGCATCGAAGATTACCACCGGCACAAGGCC GACGCTCAGGAGAACTTCCGAACCGTCACGCGAATCGCCGTGCCCGGCAA GCGCAGGCGGTCATCCCTCCTGGAGGGGGTGACCGCGCTCGTCGCCCCGG GAAAATCCTTGTCCGCACGAGGATGGTTCGGAATCGGGAAACCGAAGAAA CAGCGACAAAGCAACTATCAGAAGAAACCGCAACAACGCGCAGGGGCGGG GGGGGCGGGAGCGTCGAGCGGCGCGACACTGCCGCTTCCGCCGGGGGAAA CGGAGATGGTGCCGTGGATGGATGTCCGGGTAGGGGATCTGATCGAGATC CACAACCGGGAGAACATCCCCGCGGACATCGTCATGCTTTCCTGCAGCGA TCCGAAGGGGACGTGCTTCGTAATGACTTCGAACCTGGACGGGGAGACTA ACCTCAAGCCGCGCGTTATCAGTCCCGATCTGCGGGCCGCCACGGCCGCC CCTGGGGAGCAGGGGCAAGGGCAAGCGCTAGGTGGAGAGGCCGACAAGGC TGGAGAGAGAACGCGAGGAGTGTTAGCTTTGGCCGCGAGCGGGGCCTTCG TGGAGTGCGACCTGCCCAATCAGAAGCTGGAACACTTTGACGGCGCATTG GTGGTAAGATGTCGCGCAAAACTCGTTTTTTTTCTATTTCAAACCGCCGC GCCATTGGTTTTACTTCGAGGAAGAGGTAACTTGCGGCTCAATTTACGGA TCAACCGAGCTTACGGCCTTAACTTTTCGCTTGAAAAAAGTACACAATGT CTCCATCGATAGTCACCGGAATGAACCCAGACTCTCTCGAGAGAATTTAC GCCCGCTTTTAGTTGCGGGCACGCAGCGCAGGAATCCATCTATACCCTGA CAGATGTGGATGATGAAGTGAGGGTCTGATCTGTCTAAGCCGTCCGATAT GTGCGCCCTTCACTCACGAAGTCGATCGAATTCTCCCCGCCGGACCCCTC TACGTACCGTGAGCAGTTCCCCGACGGCGTCCGATTGCCTCTCCACGGCC ACAACGTCCTCCTGCGGGGGTGCCAGCTGCGCAACACGGAGTGGTGCCGT GGGGTGGTAGTCTACACCGGGCGGGAGACCAAGATTCAAATGAACGCTGC GGAGCCCCCCGTGAAGTACTCCTCGCTCAAGGCCTACGTCGACAGGGAGA CCCTCCGGGTCTTGTGCTTGCAGGTAACTATGAACAGCGGCGCGCGATAC GGCACGCATTGTGGCCTGGTTTTTTGTGGGTGCGTTGAGACGAAAAAATC CACGAGAGAAACGGCCAAAGGTGTTTTCTGCCGACCTACCCGACTGGAGG CGCTGGAGTACGTACATACCTGGAAAAATCAAGCCAGCTGTTGTCGCGCA CGTTAGATGACAAGACCATCTAAACCCTTCCCGTGACAACCAGTGTTATG TGGTGCGCCGCAAGCCCCACAATACACACAACGTAGGACGCCATCAGACA TATCTGTTTGTACGTTGCTTTCATCATGGCTTAATCGGTGCTGTCTGCGG CAAGTGAGTGCGCCCCTTCTGCTTTAGGATCAGACTTCGTGAATGATAAT CGGCAGAACCCCCGTAACGCTAAGGTCAACAGACAGCCACAAGCGTTCTC CCATTCACCTCATTATCCTGGACGGCCTGGGCATATTTGCCCCCAAAACC AAAACGCGTATGCGTGGACCCAAGAGCGTGGATGGTTCACGCCCGAGGAC TAGTAGTAGCATCGTAGTATGCACATTTCGATCTGGAATGGCTAGCCGCC TCGATCGCTCTCGACACAGATGGTGTAAGGCCCGCTTTGCCCGACTATCG GAGCCTCCAAAGGCCGTGCTCTTCTGGCATCGCCAGCCTCCGTTGGCGCT GGTTTCAAGACAGGATTTCGCTACGAAAGTCAAATCAGCAAGGTGTATCC CCCCCCACCCTGTTCGAGTCTGGTTGGCTGACGCTCCTGTCTGCTTTCGG AAAACAACATCGTGTGCTTCATTCGCCCTCTGCTGTACATCAGCCATGCC AACGTCGCAGTATTACCGCCTACTTGCGAGGAAACCCGCCCTTTGTCGTC CCTTTTCTTCTTGGTGAACACCAGATACTATGCTGCCTGGTGGGAGGCGT GTTTGCGGGAATCTGCGCGGCTGGGTCTGACGTCAAGAACATGTACTTCA TATGGGGGGACGGAAGCGACGGGTACCAATCCCCCTTCCTCACCGCCTTC CTGAAGTTTTGGTCCTTCATCATTATTTTCACCAACTTCGTGCCAATCTC TCTGCTCGTCACGCTGGACATGGTCAAGATGTTTCAGTCGAGACTTATCT CGTGGGACCGAGAGATGTACCACGAGGCCCGAGAGTTCAACGGGGCTAGG CGGAGTATGCCCGCGAATGTGCGT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig12337:1267..8540+

>mRNA_M-pyrifera_M_contig12337.4784.1 ID=mRNA_M-pyrifera_M_contig12337.4784.1|Name=mRNA_M-pyrifera_M_contig12337.4784.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2808bp|location=Sequence derived from alignment at M-pyrifera_M_contig12337:1267..8540+ (Macrocystis pyrifera P11B4 male)
ATGAAGCAAGCTCTTCGCAGGGGCTCGAGCCTCTTGACGGGAGGGACCTT
AGAGATGAAGCAAGCTCTTCGCAGGGGCTCGAGCCTCTTGACGGGAGGGA
CCTTAGAGAAACCACCGACTTTCCGGACCGTCGACATCGGGGACGATGGG
AAGAACGAGAGAGGTCTCTTCAAGGAGCCATTCCGACCCGGCCCGCCGCA
AACTGGTCCGGGGCACATGACGAACGAGGTCGTTACCGCCAAGAAACCAC
CGACTTTCCGGACCGTCGACATCGGGGACGATGGGAAGAACGAGAGAGGT
CTCTTCAAGGAGCCATTCCGACCCGGCCCGCCGCAAACTGGTCCGGGGCA
CATGACGAACGAGGTCGTTACCGCCAAGTACACCTTGCTCAACTTCGTCG
CGAAGAACCTGTGGGAGCAGTTCCATCGTCCGGCCAACATTTACTTCCTC
GGCATATCCATTCTCCAGTGCATCAAGGCTATCAGCATCACCGGCGGGAC
TCCGACGACGCTCGCCCCTCTCACCGCCGTGCTCTTCTACACCTTGCTCA
ACTTCGTCGCGAAGAACCTGTGGGAGCAGTTCCATCGTCCGGCCAACATT
TACTTCCTCGGCATATCCATTCTCCAGTGCATCAAGGCTATCAGCATCAC
CGGCGGGACTCCGACGACGCTCGCCCCTCTCACCGCCGTGCTCTTCGCCA
CCGCCACAAAAGACGGCATCGAAGATTACCACCGGCACAAGGCCGACGCT
CAGGAGAACTTCCGAACCGTCACGCGAATCGCCGTGCCCGGCAAGCGCAG
GCGGCCACCGCCACAAAAGACGGCATCGAAGATTACCACCGGCACAAGGC
CGACGCTCAGGAGAACTTCCGAACCGTCACGCGAATCGCCGTGCCCGGCA
AGCGCAGGCGCAACTATCAGAAGAAACCGCAACAACGCGCAGGGGCGGGG
GGGGCGGGAGCGTCGAGCGGCGCGACACTGCCGCTTCCGCCGGGGGAAAC
GGAGATGGTGCCGTGGATGGATGTCCGGGTAGGGGATCTGATCGAGATCC
ACAACCGGGAGAACATCCCCGCGGACATCGTCATGCTTTCCTGCAGCGAT
CCGAAGGGGACGTGCTTCGTAATGACTTCGAACCTGGACGGGGAGACTAA
CCTCAAGCCGCGCGTTATCAGTCCCGATCTGCGGGCCGCCACGGCCGCCC
CTGGGGAGCAGGGGCAAGGGCAAGCGCTAGGTGGAGAGGCCGACAAGGCT
GGAGAGAGAACGCGAGGAGTGTTAGCTTTGGCCGCGAGCGGGGCCTTCGT
GGAGTGCGACCTGCCCAATCAGAAGCTGGAACACTTTGACGGCGCATTGG
TGCAACTATCAGAAGAAACCGCAACAACGCGCAGGGGCGGGGGGGGCGGG
AGCGTCGAGCGGCGCGACACTGCCGCTTCCGCCGGGGGAAACGGAGATGG
TGCCGTGGATGGATGTCCGGGTAGGGGATCTGATCGAGATCCACAACCGG
GAGAACATCCCCGCGGACATCGTCATGCTTTCCTGCAGCGATCCGAAGGG
GACGTGCTTCGTAATGACTTCGAACCTGGACGGGGAGACTAACCTCAAGC
CGCGCGTTATCAGTCCCGATCTGCGGGCCGCCACGGCCGCCCCTGGGGAG
CAGGGGCAAGGGCAAGCGCTAGGTGGAGAGGCCGACAAGGCTGGAGAGAG
AACGCGAGGAGTGTTAGCTTTGGCCGCGAGCGGGGCCTTCGTGGAGTGCG
ACCTGCCCAATCAGAAGCTGGAACACTTTGACGGCGCATTGGTGTTCCCC
GACGGCGTCCGATTGCCTCTCCACGGCCACAACGTCCTCCTGCGGGGGTG
CCAGCTGCGCAACACGGAGTGGTGCCGTGGGGTGGTAGTCTACACCGGGC
GGGAGACCAAGATTCAAATGAACGCTGCGGAGCCCCCCGTGAAGTACTCC
TCGCTCAAGGCCTACGTCGACAGGGAGACCCTCCGGGTCTTGTGCTTGCA
GTTCCCCGACGGCGTCCGATTGCCTCTCCACGGCCACAACGTCCTCCTGC
GGGGGTGCCAGCTGCGCAACACGGAGTGGTGCCGTGGGGTGGTAGTCTAC
ACCGGGCGGGAGACCAAGATTCAAATGAACGCTGCGGAGCCCCCCGTGAA
GTACTCCTCGCTCAAGGCCTACGTCGACAGGGAGACCCTCCGGGTCTTGT
GCTTGCAGATACTATGCTGCCTGGTGGGAGGCGTGTTTGCGGGAATCTGC
GCGGCTGGGTCTGACGTCAAGAACATGTACTTCATATGGGGGGACGGAAG
CGACGGGTACCAATCCCCCTTCCTCACCGCCTTCCTGAAGTTTTGGTCCT
TCATCATTATTTTCACCAACTTCGTGCCAATCTCTCTGCTCGTCACGCTG
GACATGGTCAAGATGTTTCAGTCGAGACTTATCTCGTGGGACCGAGAGAT
GTACCACGAGGCCCGAGAGTTCAACGGGGCTAGGCGGAGTATGCCCGCGA
ATGTGCGTATACTATGCTGCCTGGTGGGAGGCGTGTTTGCGGGAATCTGC
GCGGCTGGGTCTGACGTCAAGAACATGTACTTCATATGGGGGGACGGAAG
CGACGGGTACCAATCCCCCTTCCTCACCGCCTTCCTGAAGTTTTGGTCCT
TCATCATTATTTTCACCAACTTCGTGCCAATCTCTCTGCTCGTCACGCTG
GACATGGTCAAGATGTTTCAGTCGAGACTTATCTCGTGGGACCGAGAGAT
GTACCACGAGGCCCGAGAGTTCAACGGGGCTAGGCGGAGTATGCCCGCGA
ATGTGCGT
back to top