mRNA_M-pyrifera_M_contig123216.4765.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A2E7K7Q2_9PLAN (Probable pectate lyase C n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K7Q2_9PLAN) HSP 1 Score: 330 bits (847), Expect = 8.980e-102 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA
Sbjct: 2104 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 2277
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A518FU83_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FU83_9PLAN) HSP 1 Score: 303 bits (777), Expect = 2.340e-92 Identity = 157/174 (90.23%), Postives = 167/174 (95.98%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+AVALN+ MLTQI+ARTFELDLSSVTGLEGEYQLRL+N+GSI+D+KYI P+SPLFG SPTNFL FGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVV+NFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSG+Y LTLNA GSSITD AGNA
Sbjct: 2102 DNVAVALNSSMLTQIDARTFELDLSSVTGLEGEYQLRLINDGSITDSKYISPYSPLFGNSPTNFLMFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVVNFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGNYVLTLNAAGSSITDQAGNA 2275
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A518AB66_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AB66_9PLAN) HSP 1 Score: 297 bits (761), Expect = 3.320e-90 Identity = 154/174 (88.51%), Postives = 165/174 (94.83%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+AVALN+ MLTQI+ARTFELDLSSVT +EGEYQLRL+N+GSI+DAKYI P+SPLFG PTN+L FGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVV+NFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSG+Y LTLNA GSSITD AGNA
Sbjct: 2106 DNVAVALNSSMLTQIDARTFELDLSSVTDVEGEYQLRLINDGSITDAKYISPYSPLFGNFPTNYLMFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVVNFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGNYVLTLNAAGSSITDQAGNA 2279
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A517WHU1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517WHU1_9PLAN) HSP 1 Score: 291 bits (746), Expect = 3.460e-88 Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGN 519
DN+AVALNA MLTQ+ +RTF LDLSSVTGLEGEYQL+LVNNG+I+DAKYI P SP+ G P NFL FGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFT+T+DGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDY LTLNA GSSITD+AGN
Sbjct: 2100 DNVAVALNASMLTQLTSRTFALDLSSVTGLEGEYQLQLVNNGTITDAKYISPASPITGDFPANFLMFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTITVDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYVLTLNAAGSSITDLAGN 2272
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A6I6AJH5_9PLAN (Beta_helix domain-containing protein n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AJH5_9PLAN) HSP 1 Score: 291 bits (745), Expect = 4.660e-88 Identity = 150/173 (86.71%), Postives = 162/173 (93.64%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGN 519
DN+AVALNA MLTQ+ +RTF LDLSSVTG++GEYQL+LVNNG+I+DAKYI P SP+ G SP NFL FGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFT+T+DGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDY LTLNA GSSITD+AGN
Sbjct: 2100 DNLAVALNASMLTQLTSRTFALDLSSVTGVQGEYQLQLVNNGTITDAKYISPASPITGNSPANFLMFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTITVDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYVLTLNAAGSSITDLAGN 2272
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A517VT31_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VT31_9PLAN) HSP 1 Score: 285 bits (728), Expect = 9.140e-86 Identity = 144/174 (82.76%), Postives = 161/174 (92.53%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+ VALNAGMLTQI+ARTFELDLSSVTG+EGEY LRL+ +GSISDAKY+DPFSPLFG P+NFL FGD+ERFTVDTT P ADIVDVSPDPRS+AAGEVV+NFSEDV GVDLSDFT++IDGG + L+STPATLTQVTGSQF+LD+SKVTSLSGDY LTLNATGSSITD+AGNA
Sbjct: 2114 DNVFVALNAGMLTQIDARTFELDLSSVTGIEGEYDLRLITDGSISDAKYVDPFSPLFGNIPSNFLSFGDIERFTVDTTDPVADIVDVSPDPRSDAAGEVVVNFSEDVTGVDLSDFTISIDGGPAVLLSSTPATLTQVTGSQFVLDLSKVTSLSGDYTLTLNATGSSITDLAGNA 2287
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A350K911_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K911_9PLAN) HSP 1 Score: 280 bits (717), Expect = 2.080e-84 Identity = 142/174 (81.61%), Postives = 161/174 (92.53%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+AVALN+ MLTQ++ARTF LDLSSVTG++GEYQLRL NG+ISD+KYIDP SP+FG P N+L FGDVERFTVDTTAPTADIVDVSPDPRS+AAGEVV+NFSEDV GVDLSDFT+T+DGGTPINLASTPATLTQV+GSQFILD+SKVTSLS +Y LTLN+ GSSITD+AGNA
Sbjct: 1267 DNVAVALNSSMLTQLDARTFSLDLSSVTGIQGEYQLRLNANGTISDSKYIDPLSPIFGDFPDNYLLFGDVERFTVDTTAPTADIVDVSPDPRSDAAGEVVVNFSEDVNGVDLSDFTITVDGGTPINLASTPATLTQVSGSQFILDLSKVTSLSANYVLTLNSAGSSITDLAGNA 1440
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A2D5H3Q9_9PLAN (Uncharacterized protein (Fragment) n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2D5H3Q9_9PLAN) HSP 1 Score: 280 bits (716), Expect = 3.710e-84 Identity = 141/174 (81.03%), Postives = 160/174 (91.95%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+AVALN MLTQ++ARTF LDLSSVTG++GEYQLRL NG+ISD+KYIDP SP+FG P N+L FGDVERFTVDTTAPTADIVDVSPDPRS+AAGEVV+NFSEDV GVDLSDF++T+DGGTP+NLASTPATLTQV+GSQFILD+SKVTSLS DY LTLN+ GSSITD+AGNA
Sbjct: 235 DNVAVALNTSMLTQLDARTFSLDLSSVTGIQGEYQLRLNANGTISDSKYIDPLSPIFGNFPDNYLLFGDVERFTVDTTAPTADIVDVSPDPRSDAAGEVVVNFSEDVNGVDLSDFSITVDGGTPVNLASTPATLTQVSGSQFILDLSKVTSLSADYVLTLNSAGSSITDLAGNA 408
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A6C557_9PLAN (Probable pectate lyase C n=2 Tax=Gimesia maris TaxID=122 RepID=A6C557_9PLAN) HSP 1 Score: 280 bits (716), Expect = 3.760e-84 Identity = 142/174 (81.61%), Postives = 160/174 (91.95%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
DN+AVALN MLTQ++ARTF LDLSSVTG++GEYQLRL NG+ISD+KYIDP SP+FG P N+L FGDVERFTVDTTAPTADIVDVSPDPRS+AAGEVV+NFSEDV GVDLSDFT+T+DGGTPINLASTPATLTQV+GSQFILD+SKVTSLS +Y LTLN+ GSSITD+AGNA
Sbjct: 2129 DNVAVALNTSMLTQLDARTFSLDLSSVTGIQGEYQLRLNANGTISDSKYIDPLSPIFGNFPDNYLLFGDVERFTVDTTAPTADIVDVSPDPRSDAAGEVVVNFSEDVNGVDLSDFTITVDGGTPINLASTPATLTQVSGSQFILDLSKVTSLSANYVLTLNSAGSSITDLAGNA 2302
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Match: A0A517WRI1_9PLAN (Probable pectate lyase C n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WRI1_9PLAN) HSP 1 Score: 272 bits (696), Expect = 1.840e-81 Identity = 138/174 (79.31%), Postives = 158/174 (90.80%), Query Frame = 1
Query: 1 DNIAVALNAGMLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASPTNFLQFGDVERFTVDTTAPTADIVDVSPDPRSEAAGEVVINFSEDVQGVDLSDFTVTIDGGTPINLASTPATLTQVTGSQFILDISKVTSLSGDYELTLNATGSSITDMAGNA 522
+N+ VALNAGMLTQI+ARTFELDLSSVTG+EGEY LRL+ +GSISDAKY+DPFSPLFG P+NFL FGDVERF VDTT P ADIVDVSPDPRS+AAGEVV+NF+EDV GVDLSDF+++IDGG + L++TPATL QVTGSQF+LD+SKVTSLSGDY LTLNA GSSITD+AGNA
Sbjct: 2123 NNVVVALNAGMLTQIDARTFELDLSSVTGIEGEYDLRLLTDGSISDAKYVDPFSPLFGNIPSNFLSFGDVERFIVDTTDPVADIVDVSPDPRSDAAGEVVVNFTEDVTGVDLSDFSISIDGGPVVLLSTTPATLRQVTGSQFVLDLSKVTSLSGDYTLTLNAAGSSITDLAGNA 2296 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123216.4765.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123216.4765.1 >prot_M-pyrifera_M_contig123216.4765.1 ID=prot_M-pyrifera_M_contig123216.4765.1|Name=mRNA_M-pyrifera_M_contig123216.4765.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=164bp MLTQINARTFELDLSSVTGLEGEYQLRLVNNGSISDAKYIDPFSPLFGASback to top mRNA from alignment at M-pyrifera_M_contig123216:3..524- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123216.4765.1 ID=mRNA_M-pyrifera_M_contig123216.4765.1|Name=mRNA_M-pyrifera_M_contig123216.4765.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig123216:3..524- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123216:3..524- >mRNA_M-pyrifera_M_contig123216.4765.1 ID=mRNA_M-pyrifera_M_contig123216.4765.1|Name=mRNA_M-pyrifera_M_contig123216.4765.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=984bp|location=Sequence derived from alignment at M-pyrifera_M_contig123216:3..524- (Macrocystis pyrifera P11B4 male)back to top |