mRNA_M-pyrifera_M_contig123049.4739.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A812KHD2_9DINO (TFCC protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KHD2_9DINO) HSP 1 Score: 120 bits (302), Expect = 2.380e-30 Identity = 55/111 (49.55%), Postives = 74/111 (66.67%), Query Frame = 1
Query: 4 VFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQR 336
V+ ++GSV+LH+CQ C F A+RQ+RLHTS C F++ SRPIIE C +L FAPY +S PS+ L+ AGL P A V +W VDDFGWH+V SP++ +L +R
Sbjct: 239 VYTGAVAGSVLLHNCQDCAFMLASRQIRLHTSTRCDFYLHVHSRPIIEFCSELRFAPYPVSFPSLPGELEEAGLQPIAAPSVAGMWREVDDFGWHKVQASPNWSVLPAAER 349
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A833SNM2_PHYIN (Tubulin binding cofactor C domain-containing protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SNM2_PHYIN) HSP 1 Score: 95.5 bits (236), Expect = 8.830e-21 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 VVFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQ 333
V + I GS+ L +C GC+FF A RQLR+H S TF++R S PIIE C+++ F PY L + L+ G+S + LWA+V+DF WH+ +SP++ I P Q
Sbjct: 333 VFYTGAIFGSLWLENCNGCEFFVACRQLRVHLSTATTFYLRIPSHPIIEDCQQIQFGPYRLQFEGLKAQLERLGVSKDSG-----LWAKVNDFKWHKAQQSPNWSIRDPKQ 438
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A7S0HVR6_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HVR6_9EUKA) HSP 1 Score: 92.8 bits (229), Expect = 9.010e-21 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = 1
Query: 4 VFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQR 336
+ A+P+ G++ + +C C F ARQ+RLHTS C F++ +S PIIE C+ L FAPY + A+ AGL P N W +VDDF W + +SPH+ IL R
Sbjct: 21 IVAVPLPGAIYVTECTDCTFVMGARQVRLHTSTGCDFYLHVSSHPIIERCDGLRFAPYPTLPAPLTGAVAAAGLDPSRNE-----WRQVDDFDWLKAQQSPHWSILPEPDR 126
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: W2PZ05_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2PZ05_PHYPN) HSP 1 Score: 94.7 bits (234), Expect = 1.640e-20 Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 1 VVFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQ 333
V + I GS+ L +C GC+FF A RQLR+H S TF +R S PIIE C+++ F PY + + L+ GLS + LWA+V+DF WH+ +SP+++I P Q
Sbjct: 329 VFYTGAIFGSLWLENCNGCEFFVACRQLRVHLSTATTFHLRIPSHPIIEDCQQMQFGPYRIQFDGLEAQLERLGLSKDSG-----LWAKVNDFKWHKAQQSPNWNIRDPKQ 434
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A662WH21_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WH21_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.730e-20 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 1 VVFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQ 333
V + + GSV L C GC+FF A RQLR+H S TF +R AS PIIE C+++ F PY L + L+ GL + LWA+V+DF WH+ +SP++ + P Q
Sbjct: 340 VFYTGAVFGSVWLETCDGCEFFVACRQLRVHLSTATTFHLRIASHPIIEDCQQMQFGPYRLQFDDLKTQLERLGLLKDSG-----LWAKVNDFKWHKAQQSPNWRLCDPKQ 445
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A2R5G785_9STRA (Tubulin-specific chaperone C n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G785_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.050e-20 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 4 VFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQR 336
+F P++GS C+ C F A+RQ+R+H S C F++ SRPIIEHC L FAPY LS+ + + AGL+ A++ W VDDF W R +SP++ IL R
Sbjct: 275 IFVGPVAGSCFFEACEDCVFMIASRQIRIHDSTRCDFYLHVLSRPIIEHCNALRFAPYGLSYKGLDSQVQAAGLAAPRAADM---WKDVDDFRWLRQQQSPNWAILDEADR 382
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A329SUW7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SUW7_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 3.190e-20 Identity = 46/111 (41.44%), Postives = 65/111 (58.56%), Query Frame = 1
Query: 1 VVFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQ 333
V + I GS+ L +C GC+FF A RQLR+H S TF +R S PIIE C+++ F PY + + L+ GLS + LWA+V+DF WH+ +SP++ I P Q
Sbjct: 334 VFYTGAIFGSLWLENCDGCEFFVACRQLRVHLSTATTFHLRIRSHPIIEDCQQMQFGPYRVQFDGLKAQLERLGLSKDSG-----LWAKVNDFKWHKTQQSPNWSIRDPKQ 439
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A2P2NI36_RHIMU (Uncharacterized protein MANES_12G134100 n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2NI36_RHIMU) HSP 1 Score: 89.4 bits (220), Expect = 3.250e-20 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1
Query: 4 VFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQR 336
VFA P+ GS+++ D + C F A+ Q+R+H + F++R SRPIIE C+ + FAPY L + + E L AGL E WA+VDDF W R +SP++ +L +R
Sbjct: 33 VFAGPVIGSILIEDVENCVFMLASHQIRIHYTKGSDFYLRLRSRPIIEDCKGVRFAPYCLQYEGVEEDLREAGLE-----EESGNWAKVDDFKWLRAVQSPNWSVLEEGER 138
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A421FXL1_9STRA (C-CAP/cofactor C-like domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FXL1_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 3.700e-20 Identity = 49/114 (42.98%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 1 VVFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSI---LEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQ 333
V + + GSV L +C GC+FF A RQLR+H S TF +R S PIIE C+++ F PY L + LE L+T S LWA+V+DF WH+ H+SP++ I +P Q
Sbjct: 302 VFYTGAVFGSVWLENCNGCEFFVACRQLRVHLSAATTFHLRIPSHPIIEDCQQMQFGPYRLQFDGLKAQLERLNTLKDS--------GLWAKVNDFKWHKTHQSPNWSIRNPKQ 407
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Match: A0A7S1CQH9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQH9_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.470e-20 Identity = 47/111 (42.34%), Postives = 68/111 (61.26%), Query Frame = 1
Query: 4 VFAMPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLSFAPYMLSHPSILEALDTAGLSPKANAEVPSLWARVDDFGWHRVHRSPHFHILSPDQR 336
V+A +SGSV+L C C F ++RQ+R+H+S C +++ S PIIEH L FAP L + I AGL+ + A +LWA VDDFGWHR SP++ +++P +R
Sbjct: 238 VYAGAVSGSVLLDACTDCVFVLSSRQIRIHSSQRCDYYLHVLSHPIIEHSSALRFAPCGLRYDGIDAQRARAGLAAERAA---TLWAAVDDFGWHRSQASPNWSVIAPAER 345 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123049.4739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig123049.4739.1 >prot_M-pyrifera_M_contig123049.4739.1 ID=prot_M-pyrifera_M_contig123049.4739.1|Name=mRNA_M-pyrifera_M_contig123049.4739.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp MPISGSVILHDCQGCKFFFAARQLRLHTSILCTFFIRSASRPIIEHCEKLback to top mRNA from alignment at M-pyrifera_M_contig123049:2..337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig123049.4739.1 ID=mRNA_M-pyrifera_M_contig123049.4739.1|Name=mRNA_M-pyrifera_M_contig123049.4739.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig123049:2..337+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig123049:2..337+ >mRNA_M-pyrifera_M_contig123049.4739.1 ID=mRNA_M-pyrifera_M_contig123049.4739.1|Name=mRNA_M-pyrifera_M_contig123049.4739.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig123049:2..337+ (Macrocystis pyrifera P11B4 male)back to top |