mRNA_M-pyrifera_M_contig122928.4707.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A7S4I8T8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I8T8_9EUKA) HSP 1 Score: 83.2 bits (204), Expect = 2.500e-16 Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 1
Query: 1 CTLNLYMLADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQGAAFDGCIFAEENVFIE 330
C+L+L D A I L + GL+LA GNEG R D+ + LYLSRN GVTW+R+ EG F ++GSLF++ +++ +SW+QG ++D C + E + +E
Sbjct: 399 CSLHLSGPVDGAEI---LTSREIPGLLLASGNEGTVRLTRDDNVNLYLSRNSGVTWERVQEGPRVFNWGNYGSLFVSTTAASETSSVEFSWDQGKSWDSCEYYSEPMEVE 505
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: UPI000A2A7146 (sortilin-related receptor n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A7146) HSP 1 Score: 68.2 bits (165), Expect = 4.830e-11 Identity = 30/81 (37.04%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 43 TPMLADKNAVGLILAQGNEGY-YRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQG 282
TPML+ +A G+++A G G + +AD L++S NGG+TW+ ++GS+ + M HG +F+A + +YSWN+G
Sbjct: 476 TPMLSSASAPGIVMAMGTPGKSLKLNAD----LFMSTNGGLTWEEALKGSYFYNMGDHGGVFIAVPRGAPTDLFYYSWNEG 552
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A6P8HAP6_ACTTE (VPS10 domain-containing receptor SorCS1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HAP6_ACTTE) HSP 1 Score: 66.6 bits (161), Expect = 1.650e-10 Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = 1
Query: 1 CTLNLYMLADQA--TITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQGAAFDGCIFAEENV 321
C LNL+M+ + I+ +L+ ++A+GLI+AQGN G Y + + +YLS +GG+ W++++ GS + HG L +A ++YS +G F I E+NV
Sbjct: 446 CGLNLHMVHSERYYQISSVLSSESALGLIMAQGNVGRYLNEETD---VYLSSDGGLHWNKILNGSHDYVFGDHGGLIVAVALGNYTKKVWYSCTEGK-FWSTIEMEKNV 550
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: I7M6Q8_TETTS (BNR/Asp-box protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M6Q8_TETTS) HSP 1 Score: 64.3 bits (155), Expect = 1.050e-9 Identity = 33/112 (29.46%), Postives = 62/112 (55.36%), Query Frame = 1
Query: 1 CTLNLYMLADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLF--YSWNQGAAFDGCIFAEENVFIE 330
C LN++ ++ + KNAVGL+LA GN G Y + + YLSR+ G+TW ++ G++ F + HGS+ + A++ T F Y+ ++G ++ ++ ++ I+
Sbjct: 461 CFLNIHSNSNDL-YNSFYSSKNAVGLVLANGNVGKYLSHSPTQVNTYLSRDAGLTWKQIKRGAYVFEIGDHGSIIVMAKDKDYGTTKFIEYTLDEGITWNQVQISDTDIEID 571
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A6P5A1Z3_BRABE (VPS10 domain-containing receptor SorCS3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A1Z3_BRABE) HSP 1 Score: 59.7 bits (143), Expect = 4.450e-8 Identity = 34/115 (29.57%), Postives = 65/115 (56.52%), Query Frame = 1
Query: 1 CTLNLYMLADQAT--ITPMLADKNAVGLILAQGNEGYYRQDADE-ALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAA--ENDRANNTLFYSWNQGAAFDGCIFAEENVFIE 330
C+L+L+M + I +++ +++VGL++AQGN G D D + +++S NGG+TWD+++E + HG +A E+ + +TL YS +G ++ F + + I+
Sbjct: 428 CSLHLHMDFSKTIYHIPSVMSRESSVGLVMAQGNVG---DDLDSISSDVFVSHNGGLTWDQVLEDRYYVVFTDHGGAIVAVKLESGKPTDTLEYSCTEGQKWESFKFTDTPLLID 539
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A7SK47_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7SK47_NEMVE) HSP 1 Score: 59.7 bits (143), Expect = 4.450e-8 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 1
Query: 1 CTLNLYMLADQA--TITPMLADKNAVGLILAQGNEGY-YRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQG 282
C+LNL+M Q I +++ K AVGLI+AQG G + + + +++SR+GG+TW R++ GS+ F + HG + A T+ YS ++G
Sbjct: 451 CSLNLHMQHSQHYYQIPGIVSSKTAVGLIIAQGELGTSFTLNPN----VFMSRDGGLTWKRVLYGSYDFVLLDHGGIIAAVPLRNNTKTVQYSCSEG 543
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A1Y2HW46_9FUNG (Uncharacterized protein n=1 Tax=Catenaria anguillulae PL171 TaxID=765915 RepID=A0A1Y2HW46_9FUNG) HSP 1 Score: 58.5 bits (140), Expect = 1.150e-7 Identity = 30/102 (29.41%), Postives = 56/102 (54.90%), Query Frame = 1
Query: 1 CTLNLYML-ADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQGAAFDGCI 303
C L+L+ + A + M ++++A GL+ GN G + D +A +++S +GGVTW+ + EG + + GSL + + D N L YS + G +++ +
Sbjct: 445 CALHLHSVTAGLGVVGKMFSERSAPGLLTGVGNVGTHLTDVRQAS-MFVSTDGGVTWNHVQEGVHHYRLLDSGSLLVLVDMDSVTNELLYSKDVGKSWNKVV 545
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A1X7VDR5_AMPQE (VPS10 domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VDR5_AMPQE) HSP 1 Score: 57.8 bits (138), Expect = 2.060e-7 Identity = 33/114 (28.95%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 1 CTLNLYMLADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAEN-----DRANNTLFYSWNQGAAFDGCIFAEENVFI 327
C+L+L+M + Q T + + +A G+I+A G G D++ LF+ SR+GGV+W+ ++ S+ ++ +G L +AA++ + L YS N+G ++ F++ N +
Sbjct: 416 CSLHLHMSSSQYWRTGVYSTASAPGIIIAHGVTGAKLNDSNVNLFI--SRDGGVSWNMTLKSSWGVSVLDYGGLIIAAQDYHQFQQTPSRRLAYSCNEGRSWSYFQFSQTNTVV 527
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A507FSJ8_9FUNG (Uncharacterized protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FSJ8_9FUNG) HSP 1 Score: 57.8 bits (138), Expect = 2.160e-7 Identity = 30/117 (25.64%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 1 CTLNLYMLADQAT-------ITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQGAAFDGCIFAEENVFIE 330
C LN+Y+ +T +L +A G ++A G+ G DA + +YL+++ G +W + + + ++ + HG++ + +++RA +TL YSWN G ++ F+E+ + ++
Sbjct: 1106 CGLNIYLKIAGSTGHFGGEGKASVLTSAHAAGFMVAVGSIGS-SLDAYKESNMYLTKDAGRSWTEIRKDAHKWAIGDHGAMIVMVDDERATDTLVYSWNYGQSWATFKFSEKPIRVD 1221
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Match: A0A6A5C6A9_NAEFO (VPS10 domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5C6A9_NAEFO) HSP 1 Score: 57.0 bits (136), Expect = 3.860e-7 Identity = 28/108 (25.93%), Postives = 59/108 (54.63%), Query Frame = 1
Query: 1 CTLNL--YMLADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWDRLMEGSFQFTMASHGSLFLAAENDRANNTLFYSWNQGAAFDGCIFAEEN 318
C LN+ + + + +L+ K+AVG+ILA GN G Y + + Y+SR+GG++W + +GS + + +HG + + +N++ + Y+ ++ + F + +
Sbjct: 429 CYLNIHGFTASSSSNYVKILSHKDAVGIILANGNVGQYLDS--KIVNTYMSRDGGLSWFEIAKGSHLYEILNHGGILVTVKNNQPTVEIRYTLDEAETWITANFTDRS 534 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122928.4707.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122928.4707.1 >prot_M-pyrifera_M_contig122928.4707.1 ID=prot_M-pyrifera_M_contig122928.4707.1|Name=mRNA_M-pyrifera_M_contig122928.4707.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp MLADQATITPMLADKNAVGLILAQGNEGYYRQDADEALFLYLSRNGGVTWback to top mRNA from alignment at M-pyrifera_M_contig122928:20..349+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122928.4707.1 ID=mRNA_M-pyrifera_M_contig122928.4707.1|Name=mRNA_M-pyrifera_M_contig122928.4707.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig122928:20..349+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122928:20..349+ >mRNA_M-pyrifera_M_contig122928.4707.1 ID=mRNA_M-pyrifera_M_contig122928.4707.1|Name=mRNA_M-pyrifera_M_contig122928.4707.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=624bp|location=Sequence derived from alignment at M-pyrifera_M_contig122928:20..349+ (Macrocystis pyrifera P11B4 male)back to top |