mRNA_M-pyrifera_M_contig122926.4706.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A7S4MEI5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MEI5_9EUKA) HSP 1 Score: 95.5 bits (236), Expect = 2.470e-20 Identity = 51/128 (39.84%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 KEDLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD--SSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYVLLLFSDIIIVARP 378
++DL S LIAP+QR+PRYVLL++ + T +H DY + ALE + ADTV+A+K +++ + A R S ++APHR+Y+ E IF R ++ + VK+++VL+LFSDI++ A+P
Sbjct: 701 RQDLSSYLIAPVQRLPRYVLLLKEMVKCTPEDHEDYKPLQQALEGITSIADTVNASKLLHESREMMIGCASRFTQQVSSQLIAPHRTYVCEGIFYRTSQAAESEPESLAVKDIHVLILFSDILVHAKP 828
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A151ZCK1_9MYCE (Pleckstrin (PH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZCK1_9MYCE) HSP 1 Score: 84.0 bits (206), Expect = 2.740e-16 Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 10 LPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYVLLLFSDIIIVARPKAA 387
L SMLI P+QRIPRYVLL+Q L +T H D+ D+ +LEKM+ A ++ K++ DN KV ++ +L G S+IV R Y+ E L V D K++Y L LF+DI+I A+P ++
Sbjct: 514 LESMLITPVQRIPRYVLLLQDLLKHTEESHPDFKDISESLEKMKNVAMQINDTKRQSDNSLKVVEVQNKLVGKFSNIVTAERRYVYEGC-------LFVGDTNAKSKKIY-LFLFNDILIFAKPSSS 632
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A2P6MZX8_9EUKA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MZX8_9EUKA) HSP 1 Score: 83.6 bits (205), Expect = 3.860e-16 Identity = 51/126 (40.48%), Postives = 72/126 (57.14%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYVLLLFSDIIIVARPK 381
DL S LI PIQRIPRYVLL+Q L +T H DY+D+ ALEKM+ A V+ K+ +N+++VF +A L G ++ APHR Y+ YL + P +L LF+DI++ + K
Sbjct: 787 DLSSFLIKPIQRIPRYVLLLQELLQHTPPRHGDYNDIARALEKMKQVAGYVNDRKREAENLNQVFHVASNLTGKFDNLCAPHRRYIRRG-------YLTQMVEKTP--KLRFCFLFNDILVCTKAK 903
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A2P6NCF8_9EUKA (DH domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NCF8_9EUKA) HSP 1 Score: 80.5 bits (197), Expect = 4.200e-15 Identity = 53/148 (35.81%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHR-----------------SYLSEAIFIRQAKYLNVADNEI----PVKELYVLL--LFSDIIIVARP 378
DL S LI PIQR+PRY+LL++ L NT ++HADY + A+EK+RG AD V+ K+ +N+ ++ KI + L GD +IV PHR S +S + + + ++ DN + P +++ L +F+D+II+A P
Sbjct: 270 DLLSFLITPIQRLPRYILLLEDLIKNTPQDHADYVPLTLAVEKIRGIADHVNEEKRVSENIQQIMKIQDELAGDFENIVEPHRRLKRTEKFTWLNSPTFRSMVSPSKSVTDEVFDDIEDNRLAAPSPTRDVATLTCWVFNDLIILATP 417
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: F0ZH73_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZH73_DICPU) HSP 1 Score: 79.7 bits (195), Expect = 8.460e-15 Identity = 45/127 (35.43%), Postives = 71/127 (55.91%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYVLLLFSDIIIVARPKA 384
DL + LI PIQR+PRY+LL+Q L NT H DY+D+ AL+KM+ A+ V+ K+ +N+++V I L G +++ PHR Y+ + I K +Y+ LF+D+++ KA
Sbjct: 526 DLSAFLIMPIQRLPRYILLLQDLLKNTKETHTDYNDLSIALKKMKDVAEYVNEKKREAENLNQVLNIQSSLTGKFNNLAEPHRRYVKKGTLISNDK-------------IYLYFLFNDLLVKTENKA 639
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A151Z9A3_9MYCE (Pleckstrin (PH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z9A3_9MYCE) HSP 1 Score: 79.0 bits (193), Expect = 1.570e-14 Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSE-AIFIRQAKYLNVADNEIPVK 327
DL S LI PIQR+PRYVLL+Q L +T H DY+D+ AL+KM+ A+ V+ K+ +N+++V I L G ++ PHR Y+ + A+F YL N++ VK
Sbjct: 516 DLSSFLIMPIQRLPRYVLLLQDLMKHTQETHTDYNDLTLALKKMKEVAEYVNEKKREAENLNQVLMIQNSLSGKFKNLAEPHRRYVHKGALFHHDKVYLYFLFNDLLVK 624
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A8J4V3U3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4V3U3_9MYCE) HSP 1 Score: 78.6 bits (192), Expect = 2.160e-14 Identity = 44/109 (40.37%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSEAIFIRQAK-YLNVADNEIPVK 327
DL + LI PIQRIPRY+LL+Q L NT H D+ D+ +AL+KM+ A+ V+ K+ +N+++V I L G +++ PHR Y+ + + K YL + N+I VK
Sbjct: 529 DLSAFLIMPIQRIPRYILLLQDLYKNTSESHPDHIDLTNALKKMKDVAEYVNEKKREAENLNQVLMIQSNLTGKFNNLAEPHRRYVRKGPVVSNDKVYLYILFNDILVK 637
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A2P6NL51_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NL51_9EUKA) HSP 1 Score: 77.8 bits (190), Expect = 4.020e-14 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERL----GGDSSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYVLLLFSDIIIVARPK 381
DL S LI PIQRIPRYVLL++ L NT +H DY + AL K+ A V+ K+ +NM+ V +I E++ G + +V PHR + + + + D K+ V LF+DI +V +PK
Sbjct: 838 DLQSFLILPIQRIPRYVLLLKDLSRNTSEDHPDYSGLMEALAKIEDVAIYVNEKKREAENMTTVMRIQEQVVFDSGREEPLVQPHRRLIKKGKLVER-------DESSVRKKSRVCFLFNDIFMVTKPK 959
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: GXCDD_DICDI (Guanine exchange factor for Rac 30 n=3 Tax=Dictyostelium discoideum TaxID=44689 RepID=GXCDD_DICDI) HSP 1 Score: 77.4 bits (189), Expect = 5.500e-14 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = 1
Query: 7 DLPSMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGD-SSIVAPHRSYLSEAIFIRQAK-YLNVADNEIPVK 327
DL + LIAPIQRIPRY+LL+Q L NT H D+ D+ AL+KM+ A+ V+ K+ +N+++V I L G +++ PHR Y+ + I K +L N++ VK
Sbjct: 585 DLSAFLIAPIQRIPRYILLLQDLLKNTKESHPDHQDLSLALKKMKDVAEYVNEKKREAENLNQVLTIQSSLTGKFNNLAEPHRRYVKKGTLISNDKIHLYFLFNDLLVK 693
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Match: A0A2P6NS56_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS56_9EUKA) HSP 1 Score: 76.3 bits (186), Expect = 1.310e-13 Identity = 42/126 (33.33%), Postives = 75/126 (59.52%), Query Frame = 1
Query: 16 SMLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAKKRYDNMSKVFKIAERLGGDSSIVAPHRSYLSEAIFIRQAKYLNVADNEIPVKELYV------LLLFSDIIIVAR 375
++LI P+QR+PRY LL++ L NT +H D+ DVCSAL KM+ ++ +K+ +N+ K+ K+ ++LG + +V PHR + E +Q + + +++ +L L LF+D +++AR
Sbjct: 310 NLLITPVQRVPRYELLLRELVKNTPDDHPDFKDVCSALFKMQDINKQINDSKRNSENLEKIVKVQQKLGAPN-LVQPHRRLIKEGGMFKQKESIGGLMSDLIRSKLGYESDNTQLYLFNDCLVIAR 434 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122926.4706.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122926.4706.1 >prot_M-pyrifera_M_contig122926.4706.1 ID=prot_M-pyrifera_M_contig122926.4706.1|Name=mRNA_M-pyrifera_M_contig122926.4706.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=123bp MLIAPIQRIPRYVLLVQVLKDNTFREHADYDDVCSALEKMRGAADTVDAAback to top mRNA from alignment at M-pyrifera_M_contig122926:57..443- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122926.4706.1 ID=mRNA_M-pyrifera_M_contig122926.4706.1|Name=mRNA_M-pyrifera_M_contig122926.4706.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig122926:57..443- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122926:57..443- >mRNA_M-pyrifera_M_contig122926.4706.1 ID=mRNA_M-pyrifera_M_contig122926.4706.1|Name=mRNA_M-pyrifera_M_contig122926.4706.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=738bp|location=Sequence derived from alignment at M-pyrifera_M_contig122926:57..443- (Macrocystis pyrifera P11B4 male)back to top |