mRNA_M-pyrifera_M_contig122837.4695.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A6B1AWI1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWI1_9ACTN) HSP 1 Score: 210 bits (534), Expect = 1.790e-65 Identity = 119/175 (68.00%), Postives = 136/175 (77.71%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
DG+ VRLAGISGLLAGAISMAAGEWVS+RA NEL+EREL IER+SL ENP E RELAAIYR+RGLK E+A +LA EIMADPE+AL VHAREELGV+P+G G PL VA +SF AF+ GAFVPL PWL +G GA +ASV++ V T RSKVRTA RQV VA+GA
Sbjct: 70 DGSLVRLAGISGLLAGAISMAAGEWVSIRAHNELVERELAIERKSLEENPKAEMRELAAIYRERGLKPESAKQLASEIMADPEVALDVHAREELGVDPEGAGSPLRVALSSFAAFATGAFVPLFPWLFAEGAGAAIASVVMAVVAASLAGVALAVFTGRSKVRTAARQVLVAAGA 244
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A3M2HBH2_ACTSX (Uncharacterized protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HBH2_ACTSX) HSP 1 Score: 206 bits (525), Expect = 3.760e-64 Identity = 120/175 (68.57%), Postives = 138/175 (78.86%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
DG+ VRLAGISGLLAGA+SMAAGEWVSVRAQNELIERELEIERRSLAENP E+RELAAIYR RG+ E AD++AE IM+DPE+AL VHAREELGV+P+G PL A ASF AF++GAF+PLVPWLV +G GA VASV++G+ T RS RTALRQ VA+GA
Sbjct: 67 DGSLVRLAGISGLLAGALSMAAGEWVSVRAQNELIERELEIERRSLAENPDLERRELAAIYRQRGVDSEHADKVAEGIMSDPEVALEVHAREELGVDPEGIASPLVAAVASFCAFALGAFIPLVPWLVAEGRGATVASVVVGLCAAAGVGALLARFTERSIWRTALRQALVAAGA 241
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A358A5E0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A5E0_9ACTN) HSP 1 Score: 194 bits (492), Expect = 1.590e-59 Identity = 113/172 (65.70%), Postives = 127/172 (73.84%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVA 516
DG+ VRLAG+SGLLAGAISMAAGEWVSVRAQNEL+ERELEIERRSLAENP E RELAAI+RDRGL E A + AE +M+DP+ AL VHAREELGV+PDGG P V ASF AF+IGA VPL+PW V +G A SV LG T S+VRTA+RQV VA
Sbjct: 39 DGSLVRLAGVSGLLAGAISMAAGEWVSVRAQNELVERELEIERRSLAENPKAETRELAAIFRDRGLDPEQAAQAAEGVMSDPDAALDVHAREELGVDPDGGSNPFQVTLASFVAFAIGALVPLLPWFVAEGTTATSWSVTLGRTAAALVGWLVGTLTVCSRVRTAIRQVLVA 210
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A2E0T436_9ACTN (Uncharacterized protein n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0T436_9ACTN) HSP 1 Score: 193 bits (490), Expect = 3.290e-59 Identity = 113/172 (65.70%), Postives = 127/172 (73.84%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVA 516
DG+ VRLAG+SGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLA P E RELAAI+RDRGL E A + A +M+DP++AL VHAREELGV+PDGG P VA ASF AF+IGA VPL+PW V +G A SV LG T RS+VRTA+RQV VA
Sbjct: 40 DGSLVRLAGVSGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAXXPEAETRELAAIFRDRGLDPEQAAQXAXGVMSDPDVALDVHAREELGVDPDGGASPFQVALASFVAFAIGALVPLLPWFVAEGTTATAWSVALGATAAALVGWLVGTLTERSRVRTAIRQVLVA 211
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A3D5K5T6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A3D5K5T6_9ACTN) HSP 1 Score: 188 bits (478), Expect = 3.210e-57 Identity = 114/175 (65.14%), Postives = 131/175 (74.86%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
D A VR+AG+SGLLAGA+SMAAGE+VS+RAQ EL+ERELEIER S+AENP E ELAAIY +RGL E A +A E+M+DPE+AL VHAREELGV+P+ G PLT A ASF+AFSIGAFVPLVPWLV G GAV AS LGV T RS VRT +RQ+ VASGA
Sbjct: 53 DAAFVRVAGVSGLLAGAVSMAAGEYVSLRAQAELVERELEIERISIAENPEAETAELAAIYIERGLNPEQARLVATELMSDPEVALDVHAREELGVDPNQLGNPLTAAVASFWAFSIGAFVPLVPWLVGSGTGAVWASAGLGVSASAAVGGLLARLTERSVVRTVVRQLVVASGA 227
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A355QC33_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A355QC33_9ACTN) HSP 1 Score: 181 bits (458), Expect = 2.600e-54 Identity = 107/175 (61.14%), Postives = 128/175 (73.14%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
D + VRLAG+SGLLAGAISMAAGE+VS++AQ EL+ERELEIER S+AENP E+ ELAAIY +RGL E A +A E+M+DPE+AL VHAREELGV+P G P+ A+ASF AF++GAFVPLVPWLV G GAV AS + GV T RS VR +RQ+ VA GA
Sbjct: 44 DPSFVRLAGVSGLLAGAISMAAGEYVSLKAQAELVERELEIERISIAENPEAEEAELAAIYVERGLDPEQAGRVAAELMSDPEVALEVHAREELGVDPSQLGNPVAAATASFLAFAVGAFVPLVPWLVGSGTGAVWASAVSGVGAAALVGGLLARLTERSVVRMVVRQLLVAGGA 218
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A2E4SWZ1_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E4SWZ1_9ACTN) HSP 1 Score: 180 bits (457), Expect = 4.820e-54 Identity = 109/175 (62.29%), Postives = 128/175 (73.14%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
D A VR+AG+SGLLAGA+SMAAGE+VS++AQ EL+EREL+IER S+AENP E ELAAIY +RGL A LA EIMADP++AL VHAREELGVNP+ G PL A ASF+AF++GAFVPLVPWLV G GA+ AS LGV T RS VRT +RQ+ VA GA
Sbjct: 53 DPAFVRVAGVSGLLAGAVSMAAGEYVSLKAQAELVERELDIERISIAENPEAELAELAAIYVERGLGPNQARVLAAEIMADPDVALDVHAREELGVNPNQLGSPLAAAMASFWAFAVGAFVPLVPWLVGSGTGALWASAGLGVGAAATVGGLLARLTERSVVRTMVRQILVAGGA 227
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A351M0F1_9ACTN (Uncharacterized protein n=3 Tax=Acidimicrobiia TaxID=84992 RepID=A0A351M0F1_9ACTN) HSP 1 Score: 179 bits (454), Expect = 1.050e-53 Identity = 109/175 (62.29%), Postives = 127/175 (72.57%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
D + VRLAGISGLLAGAISMAAGE+VS++AQ EL+ERELEIER S+AENP EQ EL+AIY RGL E AD +A E+M+DPE+AL VHAREELGV+P+ G P A ASF AF++GAFVPLVPWLV G A+ AS I GV T RS VRT +RQ+ VA GA
Sbjct: 44 DPSFVRLAGISGLLAGAISMAAGEFVSLKAQAELVERELEIERISIAENPEAEQAELSAIYVARGLDPEHADRVAAELMSDPEIALEVHAREELGVDPNQLGNPGAAAVASFLAFAVGAFVPLVPWLVGSGTSAIWASAISGVGAAALVGGVLAMLTERSVVRTVVRQLLVAGGA 218
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A2E8BF07_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8BF07_9ACTN) HSP 1 Score: 175 bits (443), Expect = 4.820e-52 Identity = 102/175 (58.29%), Postives = 127/175 (72.57%), Query Frame = 1
Query: 1 DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASGA 525
D A VR+AG+SGLLAGA+SMAAGE++S++AQ EL+EREL IER S+AE+P E EL A+Y DRGL E A+ +A ++M+DPE+AL VHAREELGV+P+ G P A++SFFAFS+GAFVPL+PWL G GAV S ILGV T RS +RT +RQV VA GA
Sbjct: 44 DPAFVRVAGVSGLLAGAVSMAAGEYISLKAQAELVERELAIERASIAEDPELETAELTAVYVDRGLDLEDAERVARDLMSDPEVALDVHAREELGVDPNNLGSPTKAATSSFFAFSLGAFVPLMPWLGGGGTGAVWLSAILGVAAAAVVGALLAHLTERSMLRTVVRQVLVAGGA 218
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Match: A0A2E5P5K8_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A2E5P5K8_9ACTN) HSP 1 Score: 173 bits (439), Expect = 2.250e-51 Identity = 101/170 (59.41%), Postives = 124/170 (72.94%), Query Frame = 1
Query: 13 VRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPLEEQRELAAIYRDRGLKQETADELAEEIMADPELALGVHAREELGVNPDGGGRPLTVASASFFAFSIGAFVPLVPWLVDDGMGAVVASVILGVXXXXXXXXXXXAATTRSKVRTALRQVAVASG 522
VR+AG++GL+AGAISMAAGE+VS++AQ EL+EREL IER S+AENP E ELAAIY +RGL E A +A E+M+DPE+AL VHAREELGV+P G PL A+ SF AF++G+FVPL+PWL G GAV AS +LGV T RS VRTA+RQ+ VA G
Sbjct: 53 VRVAGVTGLMAGAISMAAGEYVSLKAQAELVERELAIERTSIAENPEAETAELAAIYVERGLAPEQAKVVAAELMSDPEVALDVHAREELGVDPTQLGSPLAAATVSFLAFALGSFVPLIPWLGGSGTGAVWASALLGVGATATVGGMLARLTERSVVRTAIRQMLVAGG 222 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122837.4695.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122837.4695.1 >prot_M-pyrifera_M_contig122837.4695.1 ID=prot_M-pyrifera_M_contig122837.4695.1|Name=mRNA_M-pyrifera_M_contig122837.4695.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp DGARVRLAGISGLLAGAISMAAGEWVSVRAQNELIERELEIERRSLAENPback to top mRNA from alignment at M-pyrifera_M_contig122837:2..526- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122837.4695.1 ID=mRNA_M-pyrifera_M_contig122837.4695.1|Name=mRNA_M-pyrifera_M_contig122837.4695.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=525bp|location=Sequence derived from alignment at M-pyrifera_M_contig122837:2..526- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122837:2..526- >mRNA_M-pyrifera_M_contig122837.4695.1 ID=mRNA_M-pyrifera_M_contig122837.4695.1|Name=mRNA_M-pyrifera_M_contig122837.4695.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1050bp|location=Sequence derived from alignment at M-pyrifera_M_contig122837:2..526- (Macrocystis pyrifera P11B4 male)back to top |